RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 NHP2Q9NX24 153 aaKnown RBP9.93□□□□□ -0.82
PDXDC1-207ENST00000562119 SNAPINO95295 136 aa9.92□□□□□ -0.82
PDXDC1-207ENST00000562119 TRGC2P03986 189 aa9.91□□□□□ -0.82
PDXDC1-207ENST00000562119 KRTAP16-1A8MUX0 517 aa9.9□□□□□ -0.82
PDXDC1-207ENST00000562119 LST1O00453 97 aa9.89□□□□□ -0.83
PDXDC1-207ENST00000562119 SVBPQ8N300 66 aa9.89□□□□□ -0.83
PDXDC1-207ENST00000562119 MPLKIPQ8TAP9 179 aa9.88□□□□□ -0.83
PDXDC1-207ENST00000562119 SMIM11BQ8TCY0 68 aa9.87□□□□□ -0.83
PDXDC1-207ENST00000562119 OCIAD2Q56VL3 154 aa9.86□□□□□ -0.83
PDXDC1-207ENST00000562119 TRAV13-2A0A0B4J235 113 aa9.85□□□□□ -0.83
PDXDC1-207ENST00000562119 SLC7A5P1Q8MH63 180 aa9.85□□□□□ -0.83
PDXDC1-207ENST00000562119 HRES1P13985 223 aa9.84□□□□□ -0.83
PDXDC1-207ENST00000562119 SYS1-DBNDD2H3BUS1 97 aa9.83□□□□□ -0.84
PDXDC1-207ENST00000562119 Q6ZQY7 126 aa9.83□□□□□ -0.84
PDXDC1-207ENST00000562119 LINC00575Q6W349 94 aa9.82□□□□□ -0.84
PDXDC1-207ENST00000562119 RBM12B-AS1Q9P1G2 102 aa9.82□□□□□ -0.84
PDXDC1-207ENST00000562119 NDUFA5Q16718 116 aa9.81□□□□□ -0.84
PDXDC1-207ENST00000562119 IFITM1P13164 125 aa9.8□□□□□ -0.84
PDXDC1-207ENST00000562119 SCGB1D4Q6XE38 83 aa9.79□□□□□ -0.84
PDXDC1-207ENST00000562119 MUSTN1Q8IVN3 82 aa9.79□□□□□ -0.84
PDXDC1-207ENST00000562119 DSCR10P59022 87 aa9.78□□□□□ -0.84
PDXDC1-207ENST00000562119 LINC01545Q5VT33 79 aa9.78□□□□□ -0.84
PDXDC1-207ENST00000562119 COPS9Q8WXC6 57 aa9.78□□□□□ -0.84
PDXDC1-207ENST00000562119 hADV29S1A0JD25 119 aa9.76□□□□□ -0.85
PDXDC1-207ENST00000562119 H3BUT2 72 aa9.76□□□□□ -0.85
PDXDC1-207ENST00000562119 VAMP3Q15836 100 aa9.74□□□□□ -0.85
PDXDC1-207ENST00000562119 NOTCH2NLQ7Z3S9 236 aa9.74□□□□□ -0.85
PDXDC1-207ENST00000562119 SS18L2Q9UHA2 77 aa9.73□□□□□ -0.85
PDXDC1-207ENST00000562119 Q6ZVH6 145 aa9.72□□□□□ -0.85
PDXDC1-207ENST00000562119 NEBP20929 6669 aa9.72□□□□□ -0.85
PDXDC1-207ENST00000562119 PET117Q6UWS5 81 aa9.69□□□□□ -0.86
PDXDC1-207ENST00000562119 ANKRD39Q53RE8 183 aa9.68□□□□□ -0.86
PDXDC1-207ENST00000562119 SNHG12Q9BXW3 62 aa9.68□□□□□ -0.86
PDXDC1-207ENST00000562119 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.67□□□□□ -0.86
PDXDC1-207ENST00000562119 PPDPFLQ8WWR9 84 aa9.65□□□□□ -0.86
PDXDC1-207ENST00000562119 A0A087WSZ3 146 aa9.64□□□□□ -0.87
PDXDC1-207ENST00000562119 SCGB1D1O95968 90 aa9.64□□□□□ -0.87
PDXDC1-207ENST00000562119 Q8N9P0 234 aaPredicted RBP9.64□□□□□ -0.87
PDXDC1-207ENST00000562119 TEN1Q86WV5 123 aa9.63□□□□□ -0.87
PDXDC1-207ENST00000562119 LINC00313P59037 77 aa9.62□□□□□ -0.87
PDXDC1-207ENST00000562119 C3orf79P0CE67 100 aa9.61□□□□□ -0.87
PDXDC1-207ENST00000562119 COLCA2A8K830 154 aa9.6□□□□□ -0.87
PDXDC1-207ENST00000562119 KRTAP20-1Q3LI63 56 aa9.6□□□□□ -0.87
PDXDC1-207ENST00000562119 SIGMAR1Q99720 223 aa9.6□□□□□ -0.87
PDXDC1-207ENST00000562119 MUC12Q9UKN1 5478 aa9.59□□□□□ -0.87
PDXDC1-207ENST00000562119 A8MWP4 228 aa9.58□□□□□ -0.88
PDXDC1-207ENST00000562119 MTURNQ8N3F0 131 aa9.58□□□□□ -0.88
PDXDC1-207ENST00000562119 HIST1H2BKO60814 126 aa9.53□□□□□ -0.88
PDXDC1-207ENST00000562119 HIST1H2BJP06899 126 aa9.53□□□□□ -0.88
PDXDC1-207ENST00000562119 HIST1H2BOP23527 126 aa9.53□□□□□ -0.88
PDXDC1-207ENST00000562119 HIST1H2BBP33778 126 aa9.53□□□□□ -0.88
PDXDC1-207ENST00000562119 HIST1H2BDP58876 126 aa9.53□□□□□ -0.88
PDXDC1-207ENST00000562119 HIST1H2BCP62807 126 aa9.53□□□□□ -0.88
PDXDC1-207ENST00000562119 HIST2H2BEQ16778 126 aa9.53□□□□□ -0.88
PDXDC1-207ENST00000562119 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.53□□□□□ -0.88
PDXDC1-207ENST00000562119 ATOH7Q8N100 152 aa9.53□□□□□ -0.88
PDXDC1-207ENST00000562119 HIST1H2BHQ93079 126 aa9.53□□□□□ -0.88
PDXDC1-207ENST00000562119 HIST1H2BNQ99877 126 aa9.53□□□□□ -0.88
PDXDC1-207ENST00000562119 HIST1H2BMQ99879 126 aa9.53□□□□□ -0.88
PDXDC1-207ENST00000562119 KRTDAPP60985 99 aa9.52□□□□□ -0.89
PDXDC1-207ENST00000562119 NDUFV3P56181 108 aaKnown RBP9.5□□□□□ -0.89
PDXDC1-207ENST00000562119 BVES-AS1Q5T3Y7 98 aa9.5□□□□□ -0.89
PDXDC1-207ENST00000562119 IGKV4-1P06312 121 aa9.49□□□□□ -0.89
PDXDC1-207ENST00000562119 A0A1W2PNM2 257 aa9.46□□□□□ -0.9
PDXDC1-207ENST00000562119 C12orf57Q99622 126 aa9.46□□□□□ -0.9
PDXDC1-207ENST00000562119 SPINK7P58062 85 aa9.45□□□□□ -0.9
PDXDC1-207ENST00000562119 H3BMG7 143 aa9.43□□□□□ -0.9
PDXDC1-207ENST00000562119 DEFB116Q30KQ4 102 aa9.42□□□□□ -0.9
PDXDC1-207ENST00000562119 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
PDXDC1-207ENST00000562119 ZCCHC13Q8WW36 166 aaKnown RBP9.38□□□□□ -0.91
PDXDC1-207ENST00000562119 FAM218AQ96MZ4 157 aa9.38□□□□□ -0.91
PDXDC1-207ENST00000562119 LINC00472Q9H8W2 130 aa9.37□□□□□ -0.91
PDXDC1-207ENST00000562119 WFDC13Q8IUB5 93 aa9.35□□□□□ -0.91
PDXDC1-207ENST00000562119 COA6Q5JTJ3 125 aaKnown RBP9.32□□□□□ -0.92
PDXDC1-207ENST00000562119 TRBV7-4A0A0J9YYF1 115 aa9.31□□□□□ -0.92
PDXDC1-207ENST00000562119 A6NN06 94 aa9.31□□□□□ -0.92
PDXDC1-207ENST00000562119 SNCGO76070 127 aa9.31□□□□□ -0.92
PDXDC1-207ENST00000562119 FABP2P12104 132 aa9.31□□□□□ -0.92
PDXDC1-207ENST00000562119 SNRPEP62304 92 aaKnown RBP9.31□□□□□ -0.92
PDXDC1-207ENST00000562119 H0YGX0 51 aa9.28□□□□□ -0.92
PDXDC1-207ENST00000562119 KRTAP5-9P26371 169 aa9.28□□□□□ -0.92
PDXDC1-207ENST00000562119 C8orf87E5RJ46 101 aa9.27□□□□□ -0.93
PDXDC1-207ENST00000562119 A0A1B0GVX0 72 aa9.26□□□□□ -0.93
PDXDC1-207ENST00000562119 ANKRD29Q8N6D5 301 aa9.26□□□□□ -0.93
PDXDC1-207ENST00000562119 RAB37Q96AX2 223 aa9.26□□□□□ -0.93
PDXDC1-207ENST00000562119 KMT2DO14686 5537 aa9.25□□□□□ -0.93
PDXDC1-207ENST00000562119 HIST1H4GQ99525 98 aa9.24□□□□□ -0.93
PDXDC1-207ENST00000562119 MDN1Q9NU22 5596 aa9.23□□□□□ -0.93
PDXDC1-207ENST00000562119 A0A1B0GV72 72 aa9.23□□□□□ -0.93
PDXDC1-207ENST00000562119 GHRHP01286 108 aa9.22□□□□□ -0.93
PDXDC1-207ENST00000562119 MT1BP07438 61 aa9.2□□□□□ -0.94
PDXDC1-207ENST00000562119 A0A1B0GX51 115 aa9.18□□□□□ -0.94
PDXDC1-207ENST00000562119 TRACP01848 142 aa9.17□□□□□ -0.94
PDXDC1-207ENST00000562119 CCKP06307 115 aa9.17□□□□□ -0.94
PDXDC1-207ENST00000562119 H1FX-AS1Q4G0G2 97 aa9.17□□□□□ -0.94
PDXDC1-207ENST00000562119 HSBP1L1C9JCN9 74 aa9.16□□□□□ -0.94
PDXDC1-207ENST00000562119 KRTAP2-3P0C7H8 128 aa9.15□□□□□ -0.94
PDXDC1-207ENST00000562119 KRTAP2-4Q9BYR9 128 aa9.15□□□□□ -0.94
PDXDC1-207ENST00000562119 A0A0B4J2C4 111 aa9.12□□□□□ -0.95
PDXDC1-207ENST00000562119 KRTAP10-5P60370 271 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms