RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 FAT2Q9NYQ8 4349 aa7.51□□□□□ -1.21
PCAT1-202ENST00000561978 NBDYA0A0U1RRE5 68 aa7.51□□□□□ -1.21
PCAT1-202ENST00000561978 Q6JHZ5 121 aa7.5□□□□□ -1.21
PCAT1-202ENST00000561978 KTN1-AS1Q86SY8 53 aa7.5□□□□□ -1.21
PCAT1-202ENST00000561978 Q6ZR54 194 aa7.5□□□□□ -1.21
PCAT1-202ENST00000561978 C7orf33Q8WU49 177 aa7.5□□□□□ -1.21
PCAT1-202ENST00000561978 Q6ZQT0 140 aa7.49□□□□□ -1.21
PCAT1-202ENST00000561978 PRYO14603 147 aa7.48□□□□□ -1.21
PCAT1-202ENST00000561978 PSCAO43653 123 aa7.48□□□□□ -1.21
PCAT1-202ENST00000561978 UBL5Q9BZL1 73 aa7.48□□□□□ -1.21
PCAT1-202ENST00000561978 DNAH17Q9UFH2 4485 aa7.47□□□□□ -1.21
PCAT1-202ENST00000561978 C14orf177Q52M58 125 aa7.47□□□□□ -1.21
PCAT1-202ENST00000561978 ATP5EP2Q5VTU8 51 aa7.47□□□□□ -1.21
PCAT1-202ENST00000561978 PKHD1P08F94 4074 aa7.47□□□□□ -1.21
PCAT1-202ENST00000561978 ATP5EP56381 51 aaPredicted RBP7.46□□□□□ -1.21
PCAT1-202ENST00000561978 DHRS4-AS1Q9P1J3 65 aa7.46□□□□□ -1.21
PCAT1-202ENST00000561978 IGLV1-50A0A075B6I6 118 aa7.46□□□□□ -1.22
PCAT1-202ENST00000561978 CNBPP62633 177 aaKnown RBP7.46□□□□□ -1.22
PCAT1-202ENST00000561978 HECTD4Q9Y4D8 3996 aa7.45□□□□□ -1.22
PCAT1-202ENST00000561978 RTL8CO15255 209 aa7.44□□□□□ -1.22
PCAT1-202ENST00000561978 C1orf134Q5TEV5 83 aa7.44□□□□□ -1.22
PCAT1-202ENST00000561978 SPRR1AP35321 89 aa7.44□□□□□ -1.22
PCAT1-202ENST00000561978 PKD1P98161 4303 aa7.43□□□□□ -1.22
PCAT1-202ENST00000561978 IGKV3D-7A0A0C4DH55 119 aa7.43□□□□□ -1.22
PCAT1-202ENST00000561978 TRBV7-4A0A0J9YYF1 115 aa7.43□□□□□ -1.22
PCAT1-202ENST00000561978 ETDCA0A1B0GVM5 59 aa7.43□□□□□ -1.22
PCAT1-202ENST00000561978 FAM168BA1KXE4 195 aa7.43□□□□□ -1.22
PCAT1-202ENST00000561978 NDUFS5O43920 106 aa7.43□□□□□ -1.22
PCAT1-202ENST00000561978 RPL37AP8A6NKH3 93 aa7.42□□□□□ -1.22
PCAT1-202ENST00000561978 Q6ZRX8 168 aa7.42□□□□□ -1.22
PCAT1-202ENST00000561978 C16orf90A8MZG2 172 aa7.42□□□□□ -1.22
PCAT1-202ENST00000561978 KRTAP4-8A0A0G2JLE6 195 aa7.41□□□□□ -1.22
PCAT1-202ENST00000561978 KRTAP4-16G5E9R7 235 aaPredicted RBP7.41□□□□□ -1.22
PCAT1-202ENST00000561978 DNAH11Q96DT5 4516 aa7.4□□□□□ -1.22
PCAT1-202ENST00000561978 KRTAP7-1Q8IUC3 87 aa7.4□□□□□ -1.23
PCAT1-202ENST00000561978 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.23
PCAT1-202ENST00000561978 REG3GQ6UW15 175 aa7.39□□□□□ -1.23
PCAT1-202ENST00000561978 Q6ZRN7 208 aaPredicted RBP7.38□□□□□ -1.23
PCAT1-202ENST00000561978 Q8N377 158 aa7.37□□□□□ -1.23
PCAT1-202ENST00000561978 DEFB105AQ8NG35 78 aa7.37□□□□□ -1.23
PCAT1-202ENST00000561978 A0A096LNI7 61 aa7.37□□□□□ -1.23
PCAT1-202ENST00000561978 Q6ZVQ6 151 aa7.37□□□□□ -1.23
PCAT1-202ENST00000561978 Q9BRP9 147 aa7.37□□□□□ -1.23
PCAT1-202ENST00000561978 DNAH5Q8TE73 4624 aa7.36□□□□□ -1.23
PCAT1-202ENST00000561978 IGLV5-48A0A075B6I7 105 aa7.35□□□□□ -1.23
PCAT1-202ENST00000561978 A0A1B0GW54 56 aa7.35□□□□□ -1.23
PCAT1-202ENST00000561978 CXCL6P80162 114 aa7.35□□□□□ -1.23
PCAT1-202ENST00000561978 A0A0A0MQY5 61 aa7.35□□□□□ -1.23
PCAT1-202ENST00000561978 IGKV2-24A0A0C4DH68 120 aa7.35□□□□□ -1.23
PCAT1-202ENST00000561978 LINC01547P58512 204 aaPredicted RBP7.35□□□□□ -1.23
PCAT1-202ENST00000561978 UBE2BP63146 152 aa7.35□□□□□ -1.23
PCAT1-202ENST00000561978 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.34□□□□□ -1.23
PCAT1-202ENST00000561978 H7BZZ5 65 aa7.34□□□□□ -1.23
PCAT1-202ENST00000561978 HAMPP81172 84 aa7.34□□□□□ -1.23
PCAT1-202ENST00000561978 C9orf163Q8N9P6 203 aa7.34□□□□□ -1.23
PCAT1-202ENST00000561978 LINC00474Q9P2X8 69 aa7.34□□□□□ -1.23
PCAT1-202ENST00000561978 LRCOL1A6NCL2 159 aa7.33□□□□□ -1.24
PCAT1-202ENST00000561978 A0A087WVE0 104 aa7.33□□□□□ -1.24
PCAT1-202ENST00000561978 A0A1B0GVY2 172 aa7.33□□□□□ -1.24
PCAT1-202ENST00000561978 A0A1W2PNN7 141 aa7.32□□□□□ -1.24
PCAT1-202ENST00000561978 FUSP35637 526 aaKnown RBP eCLIP7.31□□□□□ -1.24
PCAT1-202ENST00000561978 NDUFC1O43677 76 aa7.31□□□□□ -1.24
PCAT1-202ENST00000561978 PHF5AQ7RTV0 110 aaKnown RBP7.31□□□□□ -1.24
PCAT1-202ENST00000561978 LRP1BQ9NZR2 4599 aa7.31□□□□□ -1.24
PCAT1-202ENST00000561978 BIRC6Q9NR09 4857 aa7.3□□□□□ -1.24
PCAT1-202ENST00000561978 BCE1O60756 84 aa7.3□□□□□ -1.24
PCAT1-202ENST00000561978 A0A087WTM6 91 aa7.29□□□□□ -1.24
PCAT1-202ENST00000561978 NREPQ16612 68 aa7.29□□□□□ -1.24
PCAT1-202ENST00000561978 LCA10Q71F78 164 aa7.29□□□□□ -1.24
PCAT1-202ENST00000561978 ST20-AS1Q8NBB2 130 aa7.29□□□□□ -1.24
PCAT1-202ENST00000561978 DYNC1H1Q14204 4646 aaKnown RBP7.29□□□□□ -1.24
PCAT1-202ENST00000561978 ERC2-IT1O76042 136 aa7.29□□□□□ -1.24
PCAT1-202ENST00000561978 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
PCAT1-202ENST00000561978 A8MUN3 132 aa7.28□□□□□ -1.24
PCAT1-202ENST00000561978 H0Y9J4 135 aa7.28□□□□□ -1.24
PCAT1-202ENST00000561978 C1orf137Q5JT78 98 aa7.28□□□□□ -1.24
PCAT1-202ENST00000561978 KLKP1Q107X0 134 aa7.28□□□□□ -1.24
PCAT1-202ENST00000561978 F8WEM9 126 aa7.27□□□□□ -1.25
PCAT1-202ENST00000561978 KIAA1109Q2LD37 5005 aa7.27□□□□□ -1.25
PCAT1-202ENST00000561978 CHTF8P0CG12 524 aa7.26□□□□□ -1.25
PCAT1-202ENST00000561978 Q8NBF4 154 aa7.24□□□□□ -1.25
PCAT1-202ENST00000561978 PRLHP81277 87 aa7.24□□□□□ -1.25
PCAT1-202ENST00000561978 SMIM29Q86T20 159 aa7.24□□□□□ -1.25
PCAT1-202ENST00000561978 C20orf197Q8N268 126 aa7.24□□□□□ -1.25
PCAT1-202ENST00000561978 SPRR4Q96PI1 79 aa7.24□□□□□ -1.25
PCAT1-202ENST00000561978 A0A1W2PNM2 257 aa7.23□□□□□ -1.25
PCAT1-202ENST00000561978 HIGD2AQ9BW72 106 aa7.23□□□□□ -1.25
PCAT1-202ENST00000561978 BPY2O14599 106 aa7.22□□□□□ -1.25
PCAT1-202ENST00000561978 MPLKIPQ8TAP9 179 aa7.22□□□□□ -1.25
PCAT1-202ENST00000561978 IGLV8-61A0A075B6I0 122 aa7.21□□□□□ -1.26
PCAT1-202ENST00000561978 UBE2AP49459 152 aa7.21□□□□□ -1.26
PCAT1-202ENST00000561978 Q1T7F1 81 aa7.21□□□□□ -1.26
PCAT1-202ENST00000561978 LCE1DQ5T752 114 aa7.21□□□□□ -1.26
PCAT1-202ENST00000561978 IGLV5-52A0A0A0MRZ9 124 aa7.2□□□□□ -1.26
PCAT1-202ENST00000561978 SCXQ7RTU7 201 aa7.2□□□□□ -1.26
PCAT1-202ENST00000561978 APOBP04114 4563 aaKnown RBP7.2□□□□□ -1.26
PCAT1-202ENST00000561978 TRAV7A0A075B6U4 112 aa7.2□□□□□ -1.26
PCAT1-202ENST00000561978 C7orf65Q6ZTY9 151 aa7.2□□□□□ -1.26
PCAT1-202ENST00000561978 SPACA4Q8TDM5 124 aa7.2□□□□□ -1.26
PCAT1-202ENST00000561978 SPRR1BP22528 89 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms