RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 C1orf134Q5TEV5 83 aa4.13□□□□□ -1.75
CAPN3-210ENST00000561817 PPDPFLQ8WWR9 84 aa4.13□□□□□ -1.75
CAPN3-210ENST00000561817 H0Y9J4 135 aa4.12□□□□□ -1.75
CAPN3-210ENST00000561817 PANO1I0J062 215 aa4.12□□□□□ -1.75
CAPN3-210ENST00000561817 NOTCH2NLQ7Z3S9 236 aa4.12□□□□□ -1.75
CAPN3-210ENST00000561817 NKAPP1Q8N9T2 125 aa4.12□□□□□ -1.75
CAPN3-210ENST00000561817 DIRC1Q969H9 104 aa4.12□□□□□ -1.75
CAPN3-210ENST00000561817 OBSCN-AS1Q96MR7 158 aa4.12□□□□□ -1.75
CAPN3-210ENST00000561817 TEX49A0A1B0GTD5 131 aa4.11□□□□□ -1.75
CAPN3-210ENST00000561817 CHTF8P0CG12 524 aa4.11□□□□□ -1.75
CAPN3-210ENST00000561817 COX7BP24311 80 aa4.11□□□□□ -1.75
CAPN3-210ENST00000561817 hADV29S1A0JD25 119 aa4.1□□□□□ -1.75
CAPN3-210ENST00000561817 RTL8CO15255 209 aa4.1□□□□□ -1.75
CAPN3-210ENST00000561817 NDUFS5O43920 106 aa4.1□□□□□ -1.75
CAPN3-210ENST00000561817 KRTAP11-1Q8IUC1 163 aa4.1□□□□□ -1.75
CAPN3-210ENST00000561817 IGKV2-24A0A0C4DH68 120 aa4.09□□□□□ -1.75
CAPN3-210ENST00000561817 RPL37AP8A6NKH3 93 aa4.09□□□□□ -1.75
CAPN3-210ENST00000561817 DNAL4O96015 105 aa4.09□□□□□ -1.75
CAPN3-210ENST00000561817 FUSP35637 526 aaKnown RBP eCLIP4.09□□□□□ -1.75
CAPN3-210ENST00000561817 SPACA4Q8TDM5 124 aa4.09□□□□□ -1.75
CAPN3-210ENST00000561817 ORMDL1Q9P0S3 153 aa4.09□□□□□ -1.75
CAPN3-210ENST00000561817 INAFM2P0DMQ5 153 aa4.08□□□□□ -1.76
CAPN3-210ENST00000561817 DYNC1H1Q14204 4646 aaKnown RBP4.08□□□□□ -1.76
CAPN3-210ENST00000561817 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-210ENST00000561817 Q9BRP9 147 aa4.08□□□□□ -1.76
CAPN3-210ENST00000561817 J3QR89 54 aa4.07□□□□□ -1.76
CAPN3-210ENST00000561817 LINC01547P58512 204 aaPredicted RBP4.07□□□□□ -1.76
CAPN3-210ENST00000561817 Q6ZQY7 126 aa4.07□□□□□ -1.76
CAPN3-210ENST00000561817 Q6ZRX8 168 aa4.07□□□□□ -1.76
CAPN3-210ENST00000561817 PHF5AQ7RTV0 110 aaKnown RBP4.07□□□□□ -1.76
CAPN3-210ENST00000561817 LINC00474Q9P2X8 69 aa4.07□□□□□ -1.76
CAPN3-210ENST00000561817 LRP1BQ9NZR2 4599 aa4.06□□□□□ -1.76
CAPN3-210ENST00000561817 TMEM256-PLSCR3K7ERE1 68 aa4.06□□□□□ -1.76
CAPN3-210ENST00000561817 REG3GQ6UW15 175 aa4.06□□□□□ -1.76
CAPN3-210ENST00000561817 EPPK1P58107 5090 aaKnown RBP4.05□□□□□ -1.76
CAPN3-210ENST00000561817 H3BQ85 93 aa4.05□□□□□ -1.76
CAPN3-210ENST00000561817 ERC2-IT1O76042 136 aa4.05□□□□□ -1.76
CAPN3-210ENST00000561817 KRTAP13-1Q8IUC0 172 aa4.05□□□□□ -1.76
CAPN3-210ENST00000561817 SMCR5Q8TEV8 140 aa4.05□□□□□ -1.76
CAPN3-210ENST00000561817 PLAC8Q9NZF1 115 aa4.05□□□□□ -1.76
CAPN3-210ENST00000561817 DHRS4-AS1Q9P1J3 65 aa4.05□□□□□ -1.76
CAPN3-210ENST00000561817 IGLV5-48A0A075B6I7 105 aa4.04□□□□□ -1.76
CAPN3-210ENST00000561817 ETDCA0A1B0GVM5 59 aa4.04□□□□□ -1.76
CAPN3-210ENST00000561817 PSPHP1O15172 72 aa4.04□□□□□ -1.76
CAPN3-210ENST00000561817 SNCGO76070 127 aa4.04□□□□□ -1.76
CAPN3-210ENST00000561817 Q8N377 158 aa4.04□□□□□ -1.76
CAPN3-210ENST00000561817 MPLKIPQ8TAP9 179 aa4.04□□□□□ -1.76
CAPN3-210ENST00000561817 C14orf132Q9NPU4 83 aa4.04□□□□□ -1.76
CAPN3-210ENST00000561817 RBM12B-AS1Q9P1G2 102 aa4.04□□□□□ -1.76
CAPN3-210ENST00000561817 JMJD7-PLA2G4BH0Y9G9 81 aa4.03□□□□□ -1.76
CAPN3-210ENST00000561817 ST20-AS1Q8NBB2 130 aa4.03□□□□□ -1.76
CAPN3-210ENST00000561817 PKHD1P08F94 4074 aa4.03□□□□□ -1.76
CAPN3-210ENST00000561817 LOC110117498A0A087WWA1 95 aa4.02□□□□□ -1.77
CAPN3-210ENST00000561817 TRBV7-4A0A0J9YYF1 115 aa4.02□□□□□ -1.77
CAPN3-210ENST00000561817 Q6ZSA8 131 aa4.02□□□□□ -1.77
CAPN3-210ENST00000561817 SMIM26A0A096LP01 95 aa4.01□□□□□ -1.77
CAPN3-210ENST00000561817 A0A1B0GVY2 172 aa4.01□□□□□ -1.77
CAPN3-210ENST00000561817 BCE1O60756 84 aa4.01□□□□□ -1.77
CAPN3-210ENST00000561817 CCKP06307 115 aa4.01□□□□□ -1.77
CAPN3-210ENST00000561817 ACYP1P07311 99 aa4.01□□□□□ -1.77
CAPN3-210ENST00000561817 NDUFV3P56181 108 aaKnown RBP4.01□□□□□ -1.77
CAPN3-210ENST00000561817 KRTAP10-1P60331 282 aa4.01□□□□□ -1.77
CAPN3-210ENST00000561817 PRLHP81277 87 aa4.01□□□□□ -1.77
CAPN3-210ENST00000561817 HRCT1Q6UXD1 115 aa4.01□□□□□ -1.77
CAPN3-210ENST00000561817 Q6ZQT0 140 aa4.01□□□□□ -1.77
CAPN3-210ENST00000561817 SMIM29Q86T20 159 aa4.01□□□□□ -1.77
CAPN3-210ENST00000561817 APOBP04114 4563 aaKnown RBP4.01□□□□□ -1.77
CAPN3-210ENST00000561817 SRRM2Q9UQ35 2752 aaKnown RBP4.01□□□□□ -1.77
CAPN3-210ENST00000561817 MT-ATP8P03928 68 aa4□□□□□ -1.77
CAPN3-210ENST00000561817 UBE2BP63146 152 aa4□□□□□ -1.77
CAPN3-210ENST00000561817 RBM3P98179 157 aaKnown RBP4□□□□□ -1.77
CAPN3-210ENST00000561817 LAMTOR3Q9UHA4 124 aa4□□□□□ -1.77
CAPN3-210ENST00000561817 BIRC6Q9NR09 4857 aa3.99□□□□□ -1.77
CAPN3-210ENST00000561817 IGHV6-1A0A0B4J1U7 121 aa3.99□□□□□ -1.77
CAPN3-210ENST00000561817 SPRR1BP22528 89 aa3.99□□□□□ -1.77
CAPN3-210ENST00000561817 MP68P56378 58 aa3.99□□□□□ -1.77
CAPN3-210ENST00000561817 HAMPP81172 84 aa3.99□□□□□ -1.77
CAPN3-210ENST00000561817 LINC00846Q9NV44 126 aa3.99□□□□□ -1.77
CAPN3-210ENST00000561817 PSORS1C2Q9UIG4 136 aa3.99□□□□□ -1.77
CAPN3-210ENST00000561817 VPS13BQ7Z7G8 4022 aa3.98□□□□□ -1.77
CAPN3-210ENST00000561817 C3orf22Q8N5N4 141 aa3.98□□□□□ -1.77
CAPN3-210ENST00000561817 DEFB105AQ8NG35 78 aa3.98□□□□□ -1.77
CAPN3-210ENST00000561817 CIRBP-AS1Q8TBR5 109 aa3.98□□□□□ -1.77
CAPN3-210ENST00000561817 DPH3Q96FX2 82 aa3.98□□□□□ -1.77
CAPN3-210ENST00000561817 IGLV8-61A0A075B6I0 122 aa3.97□□□□□ -1.77
CAPN3-210ENST00000561817 PDE6GP18545 87 aa3.97□□□□□ -1.77
CAPN3-210ENST00000561817 Q5XG85 94 aa3.97□□□□□ -1.77
CAPN3-210ENST00000561817 HIGD2AQ9BW72 106 aa3.97□□□□□ -1.77
CAPN3-210ENST00000561817 UBE2AP49459 152 aa3.96□□□□□ -1.78
CAPN3-210ENST00000561817 SCXQ7RTU7 201 aa3.96□□□□□ -1.78
CAPN3-210ENST00000561817 LINC00643Q86TS7 51 aa3.96□□□□□ -1.78
CAPN3-210ENST00000561817 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
CAPN3-210ENST00000561817 DSCR8Q96T75 97 aa3.96□□□□□ -1.78
CAPN3-210ENST00000561817 ANAPC13Q9BS18 74 aa3.96□□□□□ -1.78
CAPN3-210ENST00000561817 TRBV7-7A0A0K0K1E9 115 aa3.95□□□□□ -1.78
CAPN3-210ENST00000561817 A0A1W2PNM2 257 aa3.95□□□□□ -1.78
CAPN3-210ENST00000561817 LINC00483Q53H64 154 aa3.95□□□□□ -1.78
CAPN3-210ENST00000561817 Q6Q795 121 aa3.95□□□□□ -1.78
CAPN3-210ENST00000561817 ZNF861PO60384 105 aa3.94□□□□□ -1.78
CAPN3-210ENST00000561817 SPRR4Q96PI1 79 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms