RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	ASB16-AS1	Q495Z4	193 aa		4.1	□□□□□ -1.75
ZEB1-223	ENST00000561304	C6orf99	Q4VX62	202 aa		4.1	□□□□□ -1.75
ZEB1-223	ENST00000561304	PCP2	Q8IVA1	136 aa		4.1	□□□□□ -1.75
ZEB1-223	ENST00000561304	SLC25A20	O43772	301 aa		4.09	□□□□□ -1.75
ZEB1-223	ENST00000561304	SMIM6	P0DI80	62 aa		4.09	□□□□□ -1.75
ZEB1-223	ENST00000561304	COX7B	P24311	80 aa		4.09	□□□□□ -1.75
ZEB1-223	ENST00000561304	HRCT1	Q6UXD1	115 aa		4.09	□□□□□ -1.75
ZEB1-223	ENST00000561304	HINT1	P49773	126 aa	Predicted RBP	4.08	□□□□□ -1.76
ZEB1-223	ENST00000561304	SCGB1D4	Q6XE38	83 aa		4.08	□□□□□ -1.76
ZEB1-223	ENST00000561304	C12orf57	Q99622	126 aa		4.08	□□□□□ -1.76
ZEB1-223	ENST00000561304	DHRS4-AS1	Q9P1J3	65 aa		4.08	□□□□□ -1.76
ZEB1-223	ENST00000561304		A0A0G2JQZ4	141 aa		4.07	□□□□□ -1.76
ZEB1-223	ENST00000561304	LINC01547	P58512	204 aa	Predicted RBP	4.07	□□□□□ -1.76
ZEB1-223	ENST00000561304		Q1RN00	199 aa		4.07	□□□□□ -1.76
ZEB1-223	ENST00000561304	MUSTN1	Q8IVN3	82 aa		4.07	□□□□□ -1.76
ZEB1-223	ENST00000561304	CBY1	Q9Y3M2	126 aa		4.07	□□□□□ -1.76
ZEB1-223	ENST00000561304	C20orf202	A1L168	122 aa		4.06	□□□□□ -1.76
ZEB1-223	ENST00000561304	LCE1A	Q5T7P2	110 aa		4.06	□□□□□ -1.76
ZEB1-223	ENST00000561304	KRTAP5-11	Q6L8G4	156 aa		4.06	□□□□□ -1.76
ZEB1-223	ENST00000561304	SMIM29	Q86T20	159 aa		4.06	□□□□□ -1.76
ZEB1-223	ENST00000561304	DEFB105A	Q8NG35	78 aa		4.06	□□□□□ -1.76
ZEB1-223	ENST00000561304	MPLKIP	Q8TAP9	179 aa		4.06	□□□□□ -1.76
ZEB1-223	ENST00000561304	TRBV7-6	A0A0J9YX20	115 aa		4.05	□□□□□ -1.76
ZEB1-223	ENST00000561304	IFITM1	P13164	125 aa		4.05	□□□□□ -1.76
ZEB1-223	ENST00000561304	S100A2	P29034	98 aa		4.05	□□□□□ -1.76
ZEB1-223	ENST00000561304	HIST3H2BB	Q8N257	126 aa		4.05	□□□□□ -1.76
ZEB1-223	ENST00000561304	LAMTOR3	Q9UHA4	124 aa		4.05	□□□□□ -1.76
ZEB1-223	ENST00000561304	IGLV5-48	A0A075B6I7	105 aa		4.04	□□□□□ -1.76
ZEB1-223	ENST00000561304		A0A1B0GWB2	263 aa		4.04	□□□□□ -1.76
ZEB1-223	ENST00000561304		A6NDN8	102 aa		4.04	□□□□□ -1.76
ZEB1-223	ENST00000561304	PCP4L1	A6NKN8	68 aa		4.04	□□□□□ -1.76
ZEB1-223	ENST00000561304		H7C2G1	150 aa		4.04	□□□□□ -1.76
ZEB1-223	ENST00000561304	TAL2	Q16559	108 aa		4.04	□□□□□ -1.76
ZEB1-223	ENST00000561304	SMIM11B	Q8TCY0	68 aa		4.04	□□□□□ -1.76
ZEB1-223	ENST00000561304	HIST1H2BL	Q99880	126 aa		4.04	□□□□□ -1.76
ZEB1-223	ENST00000561304	FLG	P20930	4061 aa	Predicted RBP	4.04	□□□□□ -1.76
ZEB1-223	ENST00000561304	TEX49	A0A1B0GTD5	131 aa		4.03	□□□□□ -1.76
ZEB1-223	ENST00000561304	C9orf92	A6NGG3	77 aa		4.03	□□□□□ -1.76
ZEB1-223	ENST00000561304	SLC25A34	Q6PIV7	304 aa		4.03	□□□□□ -1.76
ZEB1-223	ENST00000561304		Q6ZVH6	145 aa		4.03	□□□□□ -1.76
ZEB1-223	ENST00000561304	LIMD2	Q9BT23	127 aa		4.03	□□□□□ -1.76
ZEB1-223	ENST00000561304	KRTAP19-2	Q3LHN2	52 aa		4.02	□□□□□ -1.77
ZEB1-223	ENST00000561304	CD164	Q04900	197 aa		4.02	□□□□□ -1.77
ZEB1-223	ENST00000561304	COPS9	Q8WXC6	57 aa		4.02	□□□□□ -1.77
ZEB1-223	ENST00000561304	PRO1933	Q9H354	126 aa		4.02	□□□□□ -1.77
ZEB1-223	ENST00000561304	TRAV13-2	A0A0B4J235	113 aa		4.01	□□□□□ -1.77
ZEB1-223	ENST00000561304	PCOTH	Q58A44	107 aa		4.01	□□□□□ -1.77
ZEB1-223	ENST00000561304	C1orf195	Q5TG92	126 aa		4.01	□□□□□ -1.77
ZEB1-223	ENST00000561304		Q5XG85	94 aa		3.99	□□□□□ -1.77
ZEB1-223	ENST00000561304	LINC00575	Q6W349	94 aa		3.99	□□□□□ -1.77
ZEB1-223	ENST00000561304	IGLV8-61	A0A075B6I0	122 aa		3.98	□□□□□ -1.77
ZEB1-223	ENST00000561304	TSTD3	H0UI37	97 aa		3.98	□□□□□ -1.77
ZEB1-223	ENST00000561304		Q6ZQY7	126 aa		3.98	□□□□□ -1.77
ZEB1-223	ENST00000561304	NHP2	Q9NX24	153 aa	Known RBP	3.98	□□□□□ -1.77
ZEB1-223	ENST00000561304	HSBP1L1	C9JCN9	74 aa		3.97	□□□□□ -1.77
ZEB1-223	ENST00000561304	PYY3	Q5JQD4	70 aa		3.97	□□□□□ -1.77
ZEB1-223	ENST00000561304	MT1H	P80294	61 aa		3.96	□□□□□ -1.78
ZEB1-223	ENST00000561304	IGFL1	Q6UW32	110 aa		3.96	□□□□□ -1.78
ZEB1-223	ENST00000561304	hADV29S1	A0JD25	119 aa		3.95	□□□□□ -1.78
ZEB1-223	ENST00000561304	COX8A	P10176	69 aa		3.95	□□□□□ -1.78
ZEB1-223	ENST00000561304	SEC61G	P60059	68 aa		3.95	□□□□□ -1.78
ZEB1-223	ENST00000561304	RPL37	P61927	97 aa	Known RBP	3.94	□□□□□ -1.78
ZEB1-223	ENST00000561304	HIST1H4G	Q99525	98 aa		3.94	□□□□□ -1.78
ZEB1-223	ENST00000561304	TRBV7-7	A0A0K0K1E9	115 aa		3.93	□□□□□ -1.78
ZEB1-223	ENST00000561304		F8WEM9	126 aa		3.93	□□□□□ -1.78
ZEB1-223	ENST00000561304	KRTAP10-7	P60409	375 aa	Predicted RBP	3.93	□□□□□ -1.78
ZEB1-223	ENST00000561304	VAMP3	Q15836	100 aa		3.93	□□□□□ -1.78
ZEB1-223	ENST00000561304	CLEC2B	Q92478	149 aa		3.93	□□□□□ -1.78
ZEB1-223	ENST00000561304	IGKV2D-30	A0A075B6S6	120 aa		3.92	□□□□□ -1.78
ZEB1-223	ENST00000561304		H3BUT2	72 aa		3.92	□□□□□ -1.78
ZEB1-223	ENST00000561304	DLEU1	O43261	78 aa		3.92	□□□□□ -1.78
ZEB1-223	ENST00000561304	TCL1B	O95988	128 aa		3.92	□□□□□ -1.78
ZEB1-223	ENST00000561304	CFC1B	P0CG36	223 aa		3.92	□□□□□ -1.78
ZEB1-223	ENST00000561304	CFC1	P0CG37	223 aa		3.92	□□□□□ -1.78
ZEB1-223	ENST00000561304	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	3.92	□□□□□ -1.78
ZEB1-223	ENST00000561304	C2orf91	Q6ZV80	131 aa		3.92	□□□□□ -1.78
ZEB1-223	ENST00000561304	C14orf144	Q96I85	54 aa		3.92	□□□□□ -1.78
ZEB1-223	ENST00000561304	FAM218A	Q96MZ4	157 aa		3.92	□□□□□ -1.78
ZEB1-223	ENST00000561304	OCIAD2	Q56VL3	154 aa		3.91	□□□□□ -1.78
ZEB1-223	ENST00000561304		Q6JHZ5	121 aa		3.91	□□□□□ -1.78
ZEB1-223	ENST00000561304	SPATA45	Q537H7	98 aa		3.9	□□□□□ -1.78
ZEB1-223	ENST00000561304	BVES-AS1	Q5T3Y7	98 aa		3.9	□□□□□ -1.78
ZEB1-223	ENST00000561304	HIGD1B	Q9P298	99 aa		3.89	□□□□□ -1.79
ZEB1-223	ENST00000561304	FSIP2	Q5CZC0	6907 aa		3.89	□□□□□ -1.79
ZEB1-223	ENST00000561304		A0A0B4J2C4	111 aa		3.89	□□□□□ -1.79
ZEB1-223	ENST00000561304		M0R143	59 aa		3.89	□□□□□ -1.79
ZEB1-223	ENST00000561304	KRTAP10-6	P60371	365 aa	Predicted RBP	3.89	□□□□□ -1.79
ZEB1-223	ENST00000561304	PPDPFL	Q8WWR9	84 aa		3.89	□□□□□ -1.79
ZEB1-223	ENST00000561304	RAB37	Q96AX2	223 aa		3.89	□□□□□ -1.79
ZEB1-223	ENST00000561304	OBSCN-AS1	Q96MR7	158 aa		3.89	□□□□□ -1.79
ZEB1-223	ENST00000561304	FXYD2	P54710	66 aa		3.88	□□□□□ -1.79
ZEB1-223	ENST00000561304	VAMP8	Q9BV40	100 aa		3.88	□□□□□ -1.79
ZEB1-223	ENST00000561304	SNHG12	Q9BXW3	62 aa		3.88	□□□□□ -1.79
ZEB1-223	ENST00000561304	CEND1	Q8N111	149 aa		3.87	□□□□□ -1.79
ZEB1-223	ENST00000561304		Q96NJ1	140 aa		3.87	□□□□□ -1.79
ZEB1-223	ENST00000561304	NDUFV3	P56181	108 aa	Known RBP	3.86	□□□□□ -1.79
ZEB1-223	ENST00000561304		Q6Q795	121 aa		3.86	□□□□□ -1.79
ZEB1-223	ENST00000561304		Q6ZVQ6	151 aa		3.86	□□□□□ -1.79
ZEB1-223	ENST00000561304		H0YGX0	51 aa		3.85	□□□□□ -1.79
ZEB1-223	ENST00000561304	LST1	O00453	97 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms