RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 IGLV8-61A0A075B6I0 122 aa9.29□□□□□ -0.92
CDC42BPB-208ENST00000561271 DLEU1O43261 78 aa9.29□□□□□ -0.92
CDC42BPB-208ENST00000561271 TCL1BO95988 128 aa9.29□□□□□ -0.92
CDC42BPB-208ENST00000561271 BVES-AS1Q5T3Y7 98 aa9.29□□□□□ -0.92
CDC42BPB-208ENST00000561271 C14orf144Q96I85 54 aa9.29□□□□□ -0.92
CDC42BPB-208ENST00000561271 PAM16Q9Y3D7 125 aa9.29□□□□□ -0.92
CDC42BPB-208ENST00000561271 IGFL1Q6UW32 110 aa9.28□□□□□ -0.92
CDC42BPB-208ENST00000561271 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.28□□□□□ -0.92
CDC42BPB-208ENST00000561271 CLEC2BQ92478 149 aa9.28□□□□□ -0.92
CDC42BPB-208ENST00000561271 SPATA45Q537H7 98 aa9.27□□□□□ -0.93
CDC42BPB-208ENST00000561271 Q6JHZ5 121 aa9.27□□□□□ -0.93
CDC42BPB-208ENST00000561271 TRBV7-7A0A0K0K1E9 115 aa9.25□□□□□ -0.93
CDC42BPB-208ENST00000561271 CFC1BP0CG36 223 aa9.25□□□□□ -0.93
CDC42BPB-208ENST00000561271 CFC1P0CG37 223 aa9.25□□□□□ -0.93
CDC42BPB-208ENST00000561271 OCIAD2Q56VL3 154 aa9.25□□□□□ -0.93
CDC42BPB-208ENST00000561271 RAB37Q96AX2 223 aa9.25□□□□□ -0.93
CDC42BPB-208ENST00000561271 KRTAP19-2Q3LHN2 52 aa9.24□□□□□ -0.93
CDC42BPB-208ENST00000561271 LCE2CQ5TA81 110 aa9.24□□□□□ -0.93
CDC42BPB-208ENST00000561271 C2orf91Q6ZV80 131 aa9.24□□□□□ -0.93
CDC42BPB-208ENST00000561271 VAMP8Q9BV40 100 aa9.24□□□□□ -0.93
CDC42BPB-208ENST00000561271 HIGD1BQ9P298 99 aa9.24□□□□□ -0.93
CDC42BPB-208ENST00000561271 H3BUT2 72 aa9.23□□□□□ -0.93
CDC42BPB-208ENST00000561271 PPDPFLQ8WWR9 84 aa9.23□□□□□ -0.93
CDC42BPB-208ENST00000561271 RPL37P61927 97 aaKnown RBP9.22□□□□□ -0.93
CDC42BPB-208ENST00000561271 A0A0B4J2C4 111 aa9.21□□□□□ -0.94
CDC42BPB-208ENST00000561271 SNHG12Q9BXW3 62 aa9.21□□□□□ -0.94
CDC42BPB-208ENST00000561271 FAM218AQ96MZ4 157 aa9.2□□□□□ -0.94
CDC42BPB-208ENST00000561271 CEND1Q8N111 149 aa9.17□□□□□ -0.94
CDC42BPB-208ENST00000561271 H0YGX0 51 aa9.15□□□□□ -0.94
CDC42BPB-208ENST00000561271 FXYD2P54710 66 aa9.14□□□□□ -0.95
CDC42BPB-208ENST00000561271 MT1HP80294 61 aa9.14□□□□□ -0.95
CDC42BPB-208ENST00000561271 SNCGO76070 127 aa9.13□□□□□ -0.95
CDC42BPB-208ENST00000561271 TMEM238LA0A1B0GVL6 79 aa9.12□□□□□ -0.95
CDC42BPB-208ENST00000561271 A6NJY4 79 aa9.12□□□□□ -0.95
CDC42BPB-208ENST00000561271 NDUFV3P56181 108 aaKnown RBP9.12□□□□□ -0.95
CDC42BPB-208ENST00000561271 OBSCN-AS1Q96MR7 158 aa9.12□□□□□ -0.95
CDC42BPB-208ENST00000561271 PRO1854Q9UHT4 67 aa9.12□□□□□ -0.95
CDC42BPB-208ENST00000561271 LST1O00453 97 aa9.11□□□□□ -0.95
CDC42BPB-208ENST00000561271 TRIAP1O43715 76 aa9.09□□□□□ -0.95
CDC42BPB-208ENST00000561271 Q6Q795 121 aa9.08□□□□□ -0.96
CDC42BPB-208ENST00000561271 SS18L2Q9UHA2 77 aa9.08□□□□□ -0.96
CDC42BPB-208ENST00000561271 KRTAP9-6A0A140TA67 174 aa9.07□□□□□ -0.96
CDC42BPB-208ENST00000561271 PYY3Q5JQD4 70 aa9.07□□□□□ -0.96
CDC42BPB-208ENST00000561271 TEN1Q86WV5 123 aa9.07□□□□□ -0.96
CDC42BPB-208ENST00000561271 A0A1B0GX51 115 aa9.06□□□□□ -0.96
CDC42BPB-208ENST00000561271 H3BMG7 143 aa9.06□□□□□ -0.96
CDC42BPB-208ENST00000561271 FABP2P12104 132 aa9.06□□□□□ -0.96
CDC42BPB-208ENST00000561271 A0A087WSZ3 146 aa9.05□□□□□ -0.96
CDC42BPB-208ENST00000561271 K7ERJ3 54 aa9.05□□□□□ -0.96
CDC42BPB-208ENST00000561271 HSD52Q0P140 79 aa9.04□□□□□ -0.96
CDC42BPB-208ENST00000561271 Q75L30 129 aa9.04□□□□□ -0.96
CDC42BPB-208ENST00000561271 LCE2DQ5TA82 110 aaPredicted RBP9.03□□□□□ -0.96
CDC42BPB-208ENST00000561271 COX6B2Q6YFQ2 88 aa9.03□□□□□ -0.96
CDC42BPB-208ENST00000561271 GHRHP01286 108 aa9.02□□□□□ -0.97
CDC42BPB-208ENST00000561271 Q96NJ1 140 aa9.02□□□□□ -0.97
CDC42BPB-208ENST00000561271 FLGP20930 4061 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPB-208ENST00000561271 A0A1B0GV72 72 aa9.01□□□□□ -0.97
CDC42BPB-208ENST00000561271 A0A1W2PNM2 257 aa9□□□□□ -0.97
CDC42BPB-208ENST00000561271 PSMB2P49721 201 aa9□□□□□ -0.97
CDC42BPB-208ENST00000561271 ATP11AUNQ6ZP68 121 aa9□□□□□ -0.97
CDC42BPB-208ENST00000561271 TMA7Q9Y2S6 64 aaKnown RBP9□□□□□ -0.97
CDC42BPB-208ENST00000561271 DNAL4O96015 105 aa8.99□□□□□ -0.97
CDC42BPB-208ENST00000561271 ORMDL1Q9P0S3 153 aa8.98□□□□□ -0.97
CDC42BPB-208ENST00000561271 M0R2T5 61 aa8.96□□□□□ -0.98
CDC42BPB-208ENST00000561271 LORP23490 312 aaPredicted RBP8.96□□□□□ -0.98
CDC42BPB-208ENST00000561271 KRTAP10-6P60371 365 aaPredicted RBP8.96□□□□□ -0.98
CDC42BPB-208ENST00000561271 SIGMAR1Q99720 223 aa8.96□□□□□ -0.98
CDC42BPB-208ENST00000561271 UQCR10Q9UDW1 63 aa8.95□□□□□ -0.98
CDC42BPB-208ENST00000561271 DSCR10P59022 87 aa8.94□□□□□ -0.98
CDC42BPB-208ENST00000561271 ANKRD29Q8N6D5 301 aa8.94□□□□□ -0.98
CDC42BPB-208ENST00000561271 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
CDC42BPB-208ENST00000561271 COX6CP09669 75 aa8.93□□□□□ -0.98
CDC42BPB-208ENST00000561271 A8MUU9 505 aa8.92□□□□□ -0.98
CDC42BPB-208ENST00000561271 TRBV7-4A0A0J9YYF1 115 aa8.9□□□□□ -0.98
CDC42BPB-208ENST00000561271 H3BQ85 93 aa8.89□□□□□ -0.99
CDC42BPB-208ENST00000561271 TMEM256-PLSCR3K7ERE1 68 aa8.89□□□□□ -0.99
CDC42BPB-208ENST00000561271 IGKV4-1P06312 121 aa8.88□□□□□ -0.99
CDC42BPB-208ENST00000561271 FSIP2Q5CZC0 6907 aa8.87□□□□□ -0.99
CDC42BPB-208ENST00000561271 CCKP06307 115 aa8.87□□□□□ -0.99
CDC42BPB-208ENST00000561271 TRACP01848 142 aa8.86□□□□□ -0.99
CDC42BPB-208ENST00000561271 UBE2V1Q13404 147 aa8.85□□□□□ -0.99
CDC42BPB-208ENST00000561271 DEFB116Q30KQ4 102 aa8.85□□□□□ -0.99
CDC42BPB-208ENST00000561271 CRCT1Q9UGL9 99 aa8.84□□□□□ -0.99
CDC42BPB-208ENST00000561271 KRTAP16-1A8MUX0 517 aa8.83□□□□□ -1
CDC42BPB-208ENST00000561271 SCGB1C2P0DMR2 95 aa8.83□□□□□ -1
CDC42BPB-208ENST00000561271 LINC00313P59037 77 aa8.83□□□□□ -1
CDC42BPB-208ENST00000561271 VPS25Q9BRG1 176 aa8.82□□□□□ -1
CDC42BPB-208ENST00000561271 LINC00472Q9H8W2 130 aa8.82□□□□□ -1
CDC42BPB-208ENST00000561271 NOTCH2NLQ7Z3S9 236 aa8.81□□□□□ -1
CDC42BPB-208ENST00000561271 IGHV6-1A0A0B4J1U7 121 aa8.78□□□□□ -1
CDC42BPB-208ENST00000561271 RBM3P98179 157 aaKnown RBP8.77□□□□□ -1.01
CDC42BPB-208ENST00000561271 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
CDC42BPB-208ENST00000561271 DSCR8Q96T75 97 aa8.76□□□□□ -1.01
CDC42BPB-208ENST00000561271 BAALC-AS2P0C853 105 aa8.74□□□□□ -1.01
CDC42BPB-208ENST00000561271 NAA38Q9BRA0 125 aaKnown RBP8.74□□□□□ -1.01
CDC42BPB-208ENST00000561271 A0A1B0GVX0 72 aa8.71□□□□□ -1.02
CDC42BPB-208ENST00000561271 M0R143 59 aa8.71□□□□□ -1.02
CDC42BPB-208ENST00000561271 C9JAW5 83 aa8.7□□□□□ -1.02
CDC42BPB-208ENST00000561271 C8orf87E5RJ46 101 aa8.69□□□□□ -1.02
CDC42BPB-208ENST00000561271 FAM236DA0A1B0GTK5 79 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms