RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 IGLV7-43P04211 117 aa6.87□□□□□ -1.31
SNX1-212ENST00000560861 SPRR1BP22528 89 aa6.87□□□□□ -1.31
SNX1-212ENST00000560861 PPDPFLQ8WWR9 84 aa6.87□□□□□ -1.31
SNX1-212ENST00000560861 HIGD2AQ9BW72 106 aa6.87□□□□□ -1.31
SNX1-212ENST00000560861 TEX49A0A1B0GTD5 131 aa6.85□□□□□ -1.31
SNX1-212ENST00000560861 GHRHP01286 108 aa6.85□□□□□ -1.31
SNX1-212ENST00000560861 SMIM29Q86T20 159 aa6.85□□□□□ -1.31
SNX1-212ENST00000560861 NDUFV3P56181 108 aaKnown RBP6.83□□□□□ -1.32
SNX1-212ENST00000560861 KRTAP10-4P60372 401 aaPredicted RBP6.83□□□□□ -1.32
SNX1-212ENST00000560861 FAT1Q14517 4588 aa6.83□□□□□ -1.32
SNX1-212ENST00000560861 VPS13BQ7Z7G8 4022 aa6.82□□□□□ -1.32
SNX1-212ENST00000560861 DEFB105AQ8NG35 78 aa6.82□□□□□ -1.32
SNX1-212ENST00000560861 SPRR4Q96PI1 79 aa6.82□□□□□ -1.32
SNX1-212ENST00000560861 JMJD7-PLA2G4BH0Y9G9 81 aa6.81□□□□□ -1.32
SNX1-212ENST00000560861 LINC00483Q53H64 154 aa6.81□□□□□ -1.32
SNX1-212ENST00000560861 C3orf22Q8N5N4 141 aa6.8□□□□□ -1.32
SNX1-212ENST00000560861 TRBV7-4A0A0J9YYF1 115 aa6.79□□□□□ -1.32
SNX1-212ENST00000560861 CDK2AP2O75956 126 aa6.79□□□□□ -1.32
SNX1-212ENST00000560861 GAGE2AQ6NT46 116 aa6.79□□□□□ -1.32
SNX1-212ENST00000560861 C14orf132Q9NPU4 83 aa6.79□□□□□ -1.32
SNX1-212ENST00000560861 LAMTOR3Q9UHA4 124 aa6.79□□□□□ -1.32
SNX1-212ENST00000560861 IGLV8-61A0A075B6I0 122 aa6.78□□□□□ -1.32
SNX1-212ENST00000560861 LOC110117498A0A087WWA1 95 aa6.78□□□□□ -1.32
SNX1-212ENST00000560861 SMR3BP02814 79 aaPredicted RBP6.78□□□□□ -1.32
SNX1-212ENST00000560861 RPL37AP61513 92 aaKnown RBP6.78□□□□□ -1.32
SNX1-212ENST00000560861 ZNF706Q9Y5V0 76 aaPredicted RBP6.78□□□□□ -1.32
SNX1-212ENST00000560861 RBM3P98179 157 aaKnown RBP6.77□□□□□ -1.33
SNX1-212ENST00000560861 PKHD1L1Q86WI1 4243 aa6.77□□□□□ -1.33
SNX1-212ENST00000560861 A0A1B0GV72 72 aa6.76□□□□□ -1.33
SNX1-212ENST00000560861 Q6ZQT0 140 aa6.76□□□□□ -1.33
SNX1-212ENST00000560861 K7ERU9 68 aa6.75□□□□□ -1.33
SNX1-212ENST00000560861 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
SNX1-212ENST00000560861 KRTAP1-4P0C5Y4 121 aa6.74□□□□□ -1.33
SNX1-212ENST00000560861 CCKP06307 115 aa6.73□□□□□ -1.33
SNX1-212ENST00000560861 PDE6GP18545 87 aa6.73□□□□□ -1.33
SNX1-212ENST00000560861 FAM240AA0A1B0GVK7 77 aa6.72□□□□□ -1.33
SNX1-212ENST00000560861 J3QR89 54 aa6.72□□□□□ -1.33
SNX1-212ENST00000560861 SPINK6Q6UWN8 80 aa6.72□□□□□ -1.33
SNX1-212ENST00000560861 DSCR8Q96T75 97 aa6.72□□□□□ -1.33
SNX1-212ENST00000560861 ANAPC11Q9NYG5 84 aa6.72□□□□□ -1.33
SNX1-212ENST00000560861 F8WEM9 126 aa6.71□□□□□ -1.34
SNX1-212ENST00000560861 A0A1W2PNM2 257 aa6.7□□□□□ -1.34
SNX1-212ENST00000560861 FAM229AH3BQW9 127 aa6.7□□□□□ -1.34
SNX1-212ENST00000560861 FAM229BQ4G0N7 80 aa6.7□□□□□ -1.34
SNX1-212ENST00000560861 IGFL1Q6UW32 110 aa6.7□□□□□ -1.34
SNX1-212ENST00000560861 A0A0G2JQZ4 141 aa6.69□□□□□ -1.34
SNX1-212ENST00000560861 C21orf62-AS1Q17RA5 79 aa6.69□□□□□ -1.34
SNX1-212ENST00000560861 Q6JHZ5 121 aa6.69□□□□□ -1.34
SNX1-212ENST00000560861 Q8NBF4 154 aa6.69□□□□□ -1.34
SNX1-212ENST00000560861 CDIP1Q9H305 208 aa6.68□□□□□ -1.34
SNX1-212ENST00000560861 A0A087X002 238 aa6.67□□□□□ -1.34
SNX1-212ENST00000560861 PLA2G1BP04054 148 aaKnown RBP6.67□□□□□ -1.34
SNX1-212ENST00000560861 ACYP1P07311 99 aa6.67□□□□□ -1.34
SNX1-212ENST00000560861 KRTAP13-2Q52LG2 175 aa6.67□□□□□ -1.34
SNX1-212ENST00000560861 IGLV9-49A0A0B4J1Y8 123 aa6.66□□□□□ -1.34
SNX1-212ENST00000560861 Q5VSD8 79 aa6.66□□□□□ -1.34
SNX1-212ENST00000560861 Q6Q795 121 aa6.66□□□□□ -1.34
SNX1-212ENST00000560861 LINC00846Q9NV44 126 aa6.66□□□□□ -1.34
SNX1-212ENST00000560861 CRYGAP11844 174 aa6.65□□□□□ -1.34
SNX1-212ENST00000560861 MOBPQ13875 183 aa6.65□□□□□ -1.34
SNX1-212ENST00000560861 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.34
SNX1-212ENST00000560861 A0A1B0GW54 56 aa6.64□□□□□ -1.35
SNX1-212ENST00000560861 C9orf153Q5TBE3 101 aa6.64□□□□□ -1.35
SNX1-212ENST00000560861 Q8N1X5 172 aa6.64□□□□□ -1.35
SNX1-212ENST00000560861 HERC1Q15751 4861 aa6.64□□□□□ -1.35
SNX1-212ENST00000560861 SSBP3-AS1Q7Z2R9 100 aa6.63□□□□□ -1.35
SNX1-212ENST00000560861 VPS25Q9BRG1 176 aa6.63□□□□□ -1.35
SNX1-212ENST00000560861 TRBV7-7A0A0K0K1E9 115 aa6.6□□□□□ -1.35
SNX1-212ENST00000560861 MYCBP2O75592 4640 aa6.59□□□□□ -1.36
SNX1-212ENST00000560861 CD164Q04900 197 aa6.58□□□□□ -1.36
SNX1-212ENST00000560861 Q6ZVQ6 151 aa6.58□□□□□ -1.36
SNX1-212ENST00000560861 PRR26Q8N8Z3 221 aa6.58□□□□□ -1.36
SNX1-212ENST00000560861 FLG2Q5D862 2391 aaPredicted RBP6.58□□□□□ -1.36
SNX1-212ENST00000560861 LINC00643Q86TS7 51 aa6.57□□□□□ -1.36
SNX1-212ENST00000560861 FAT3Q8TDW7 4589 aa6.57□□□□□ -1.36
SNX1-212ENST00000560861 A0A087WSZ3 146 aa6.56□□□□□ -1.36
SNX1-212ENST00000560861 UBL5Q9BZL1 73 aa6.55□□□□□ -1.36
SNX1-212ENST00000560861 LRP1Q07954 4544 aaKnown RBP6.55□□□□□ -1.36
SNX1-212ENST00000560861 MT-ATP8P03928 68 aa6.54□□□□□ -1.36
SNX1-212ENST00000560861 TYMSOSQ8TAI1 123 aa6.54□□□□□ -1.36
SNX1-212ENST00000560861 HRCT1Q6UXD1 115 aa6.53□□□□□ -1.36
SNX1-212ENST00000560861 KRTAP10-8P60410 259 aa6.52□□□□□ -1.37
SNX1-212ENST00000560861 Q5XG85 94 aa6.52□□□□□ -1.37
SNX1-212ENST00000560861 LINC00472Q9H8W2 130 aa6.52□□□□□ -1.37
SNX1-212ENST00000560861 NREPQ16612 68 aa6.51□□□□□ -1.37
SNX1-212ENST00000560861 ATP5EP2Q5VTU8 51 aa6.51□□□□□ -1.37
SNX1-212ENST00000560861 Q96NJ1 140 aa6.51□□□□□ -1.37
SNX1-212ENST00000560861 KRTAP9-2Q9BYQ4 174 aa6.51□□□□□ -1.37
SNX1-212ENST00000560861 TNXBP22105 4242 aa6.51□□□□□ -1.37
SNX1-212ENST00000560861 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
SNX1-212ENST00000560861 ASB16-AS1Q495Z4 193 aa6.5□□□□□ -1.37
SNX1-212ENST00000560861 SIGMAR1Q99720 223 aa6.5□□□□□ -1.37
SNX1-212ENST00000560861 IGKV3D-7A0A0C4DH55 119 aa6.49□□□□□ -1.37
SNX1-212ENST00000560861 CXCL6P80162 114 aa6.49□□□□□ -1.37
SNX1-212ENST00000560861 LINC00304Q8N9R0 145 aa6.49□□□□□ -1.37
SNX1-212ENST00000560861 SS18L2Q9UHA2 77 aa6.49□□□□□ -1.37
SNX1-212ENST00000560861 RPS29P62273 56 aaKnown RBP6.48□□□□□ -1.37
SNX1-212ENST00000560861 KRTAP9-6A0A140TA67 174 aa6.47□□□□□ -1.37
SNX1-212ENST00000560861 DSCR10P59022 87 aa6.47□□□□□ -1.37
SNX1-212ENST00000560861 SPAG11AQ6PDA7 123 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms