RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 ERC2-IT1O76042 136 aa5.95□□□□□ -1.46
TRPM1-212ENST00000560801 CELSR1Q9NYQ6 3014 aa5.95□□□□□ -1.46
TRPM1-212ENST00000560801 ATP5EP2Q5VTU8 51 aa5.95□□□□□ -1.46
TRPM1-212ENST00000560801 RBM12B-AS1Q9P1G2 102 aa5.95□□□□□ -1.46
TRPM1-212ENST00000560801 hDV103S1A0JD37 113 aa5.95□□□□□ -1.46
TRPM1-212ENST00000560801 KRTAP26-1Q6PEX3 210 aa5.95□□□□□ -1.46
TRPM1-212ENST00000560801 HCG22E2RYF7 251 aa5.94□□□□□ -1.46
TRPM1-212ENST00000560801 ANAPC13Q9BS18 74 aa5.94□□□□□ -1.46
TRPM1-212ENST00000560801 C8orf87E5RJ46 101 aa5.93□□□□□ -1.46
TRPM1-212ENST00000560801 PANO1I0J062 215 aa5.93□□□□□ -1.46
TRPM1-212ENST00000560801 LINC00643Q86TS7 51 aa5.93□□□□□ -1.46
TRPM1-212ENST00000560801 VWFP04275 2813 aa5.93□□□□□ -1.46
TRPM1-212ENST00000560801 Q8N9L7 120 aa5.93□□□□□ -1.46
TRPM1-212ENST00000560801 TRBV7-7A0A0K0K1E9 115 aa5.92□□□□□ -1.46
TRPM1-212ENST00000560801 IGFL1Q6UW32 110 aa5.91□□□□□ -1.46
TRPM1-212ENST00000560801 SMIM20Q8N5G0 67 aa5.91□□□□□ -1.46
TRPM1-212ENST00000560801 DSCR10P59022 87 aa5.91□□□□□ -1.46
TRPM1-212ENST00000560801 LITAFQ99732 161 aa5.9□□□□□ -1.46
TRPM1-212ENST00000560801 SPTSSBQ8NFR3 76 aa5.9□□□□□ -1.47
TRPM1-212ENST00000560801 TRBV7-4A0A0J9YYF1 115 aa5.89□□□□□ -1.47
TRPM1-212ENST00000560801 A0A1B0GW54 56 aa5.89□□□□□ -1.47
TRPM1-212ENST00000560801 A0A0G2JQZ4 141 aa5.89□□□□□ -1.47
TRPM1-212ENST00000560801 Q8N377 158 aa5.89□□□□□ -1.47
TRPM1-212ENST00000560801 CD164Q04900 197 aa5.88□□□□□ -1.47
TRPM1-212ENST00000560801 FAM218AQ96MZ4 157 aa5.87□□□□□ -1.47
TRPM1-212ENST00000560801 FAM236AA0A1B0GUQ0 79 aa5.87□□□□□ -1.47
TRPM1-212ENST00000560801 FAM236BA0A1B0GV22 79 aa5.87□□□□□ -1.47
TRPM1-212ENST00000560801 EIF4EBP3O60516 100 aaPredicted RBP5.86□□□□□ -1.47
TRPM1-212ENST00000560801 IGLV8-61A0A075B6I0 122 aa5.86□□□□□ -1.47
TRPM1-212ENST00000560801 LINC00208Q96KT6 92 aa5.85□□□□□ -1.47
TRPM1-212ENST00000560801 ATOX1O00244 68 aa5.84□□□□□ -1.47
TRPM1-212ENST00000560801 FP248Q71RG6 208 aaPredicted RBP5.84□□□□□ -1.48
TRPM1-212ENST00000560801 SERP1Q9Y6X1 66 aa5.82□□□□□ -1.48
TRPM1-212ENST00000560801 PCOTHQ58A44 107 aa5.82□□□□□ -1.48
TRPM1-212ENST00000560801 FAM104AQ969W3 186 aa5.82□□□□□ -1.48
TRPM1-212ENST00000560801 TP53AIP1Q9HCN2 124 aa5.82□□□□□ -1.48
TRPM1-212ENST00000560801 A8MWP4 228 aa5.81□□□□□ -1.48
TRPM1-212ENST00000560801 C5orf47Q569G3 176 aa5.8□□□□□ -1.48
TRPM1-212ENST00000560801 MRPL34Q9BQ48 92 aaKnown RBP5.8□□□□□ -1.48
TRPM1-212ENST00000560801 A0A1B0GVX0 72 aa5.8□□□□□ -1.48
TRPM1-212ENST00000560801 C7orf65Q6ZTY9 151 aa5.8□□□□□ -1.48
TRPM1-212ENST00000560801 Q6ZQT0 140 aa5.79□□□□□ -1.48
TRPM1-212ENST00000560801 SPENQ96T58 3664 aaKnown RBP5.79□□□□□ -1.48
TRPM1-212ENST00000560801 CSMD1Q96PZ7 3565 aa5.79□□□□□ -1.48
TRPM1-212ENST00000560801 H0Y9P7 68 aa5.79□□□□□ -1.48
TRPM1-212ENST00000560801 LINC01600Q96MT4 127 aa5.79□□□□□ -1.48
TRPM1-212ENST00000560801 SRRM2Q9UQ35 2752 aaKnown RBP5.78□□□□□ -1.48
TRPM1-212ENST00000560801 CXCL6P80162 114 aa5.78□□□□□ -1.48
TRPM1-212ENST00000560801 SPRR1AP35321 89 aa5.77□□□□□ -1.49
TRPM1-212ENST00000560801 C8orf17Q9NRJ1 99 aa5.76□□□□□ -1.49
TRPM1-212ENST00000560801 LOC110117498A0A087WWA1 95 aa5.76□□□□□ -1.49
TRPM1-212ENST00000560801 A0A087X002 238 aa5.75□□□□□ -1.49
TRPM1-212ENST00000560801 C20orf197Q8N268 126 aa5.75□□□□□ -1.49
TRPM1-212ENST00000560801 LINC00846Q9NV44 126 aa5.75□□□□□ -1.49
TRPM1-212ENST00000560801 CSMD2Q7Z408 3487 aa5.75□□□□□ -1.49
TRPM1-212ENST00000560801 A0A1B0GVY2 172 aa5.74□□□□□ -1.49
TRPM1-212ENST00000560801 IGLV5-48A0A075B6I7 105 aa5.74□□□□□ -1.49
TRPM1-212ENST00000560801 SMIM29Q86T20 159 aa5.74□□□□□ -1.49
TRPM1-212ENST00000560801 CUBNO60494 3623 aa5.73□□□□□ -1.49
TRPM1-212ENST00000560801 C1orf64Q8NEQ6 169 aa5.72□□□□□ -1.49
TRPM1-212ENST00000560801 SVEP1Q4LDE5 3571 aa5.72□□□□□ -1.49
TRPM1-212ENST00000560801 IMUPQ9GZP8 106 aa5.72□□□□□ -1.49
TRPM1-212ENST00000560801 K7ERS5 55 aa5.71□□□□□ -1.49
TRPM1-212ENST00000560801 UQCRQO14949 82 aa5.71□□□□□ -1.49
TRPM1-212ENST00000560801 PRR15Q8IV56 129 aa5.71□□□□□ -1.49
TRPM1-212ENST00000560801 SPRR1BP22528 89 aa5.7□□□□□ -1.5
TRPM1-212ENST00000560801 Q8NDZ9 215 aa5.7□□□□□ -1.5
TRPM1-212ENST00000560801 FAM240AA0A1B0GVK7 77 aa5.69□□□□□ -1.5
TRPM1-212ENST00000560801 A0A1W2PNM2 257 aa5.69□□□□□ -1.5
TRPM1-212ENST00000560801 TMEM254Q8TBM7 123 aa5.69□□□□□ -1.5
TRPM1-212ENST00000560801 MT-ATP8P03928 68 aa5.69□□□□□ -1.5
TRPM1-212ENST00000560801 K7EQZ3 153 aa5.68□□□□□ -1.5
TRPM1-212ENST00000560801 A0A087WVE0 104 aa5.68□□□□□ -1.5
TRPM1-212ENST00000560801 TRAV22A0A0B4J277 110 aa5.68□□□□□ -1.5
TRPM1-212ENST00000560801 KRTAP29-1A8MX34 341 aaPredicted RBP5.67□□□□□ -1.5
TRPM1-212ENST00000560801 LOC101927531A0A1B0GV80 90 aa5.66□□□□□ -1.5
TRPM1-212ENST00000560801 NDUFC1O43677 76 aa5.66□□□□□ -1.5
TRPM1-212ENST00000560801 TMEM258P61165 79 aa5.66□□□□□ -1.5
TRPM1-212ENST00000560801 SNURFQ9Y675 71 aa5.66□□□□□ -1.5
TRPM1-212ENST00000560801 PRR15LQ9BU68 103 aa5.66□□□□□ -1.5
TRPM1-212ENST00000560801 C1orf195Q5TG92 126 aa5.65□□□□□ -1.5
TRPM1-212ENST00000560801 SERP2Q8N6R1 65 aa5.65□□□□□ -1.5
TRPM1-212ENST00000560801 LINC00483Q53H64 154 aa5.65□□□□□ -1.5
TRPM1-212ENST00000560801 KRTAP11-1Q8IUC1 163 aa5.64□□□□□ -1.51
TRPM1-212ENST00000560801 TRAV7A0A075B6U4 112 aa5.6□□□□□ -1.51
TRPM1-212ENST00000560801 ANK3Q12955 4377 aaKnown RBP5.6□□□□□ -1.51
TRPM1-212ENST00000560801 RPS29P62273 56 aaKnown RBP5.59□□□□□ -1.51
TRPM1-212ENST00000560801 ACYP2P14621 99 aa5.59□□□□□ -1.51
TRPM1-212ENST00000560801 ZCCHC13Q8WW36 166 aaKnown RBP5.59□□□□□ -1.52
TRPM1-212ENST00000560801 KRTAP13-2Q52LG2 175 aa5.58□□□□□ -1.52
TRPM1-212ENST00000560801 SPINK7P58062 85 aa5.56□□□□□ -1.52
TRPM1-212ENST00000560801 KRTAP4-16G5E9R7 235 aaPredicted RBP5.55□□□□□ -1.52
TRPM1-212ENST00000560801 COL7A1Q02388 2944 aa5.55□□□□□ -1.52
TRPM1-212ENST00000560801 H3BPC8 53 aa5.55□□□□□ -1.52
TRPM1-212ENST00000560801 KRTAP7-1Q8IUC3 87 aa5.55□□□□□ -1.52
TRPM1-212ENST00000560801 CSAG1Q6PB30 78 aa5.54□□□□□ -1.52
TRPM1-212ENST00000560801 LINC01554Q52M75 96 aa5.52□□□□□ -1.53
TRPM1-212ENST00000560801 C4orf26Q17RF5 130 aa5.52□□□□□ -1.53
TRPM1-212ENST00000560801 SMCPP49901 116 aaPredicted RBP5.51□□□□□ -1.53
TRPM1-212ENST00000560801 KRTAP13-1Q8IUC0 172 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms