RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 TRACP01848 142 aa2.76□□□□□ -1.97
TMOD3-207ENST00000560549 MT-ATP8P03928 68 aa2.76□□□□□ -1.97
TMOD3-207ENST00000560549 KRTAP1-4P0C5Y4 121 aa2.76□□□□□ -1.97
TMOD3-207ENST00000560549 DNAH10OSP0CZ25 163 aa2.76□□□□□ -1.97
TMOD3-207ENST00000560549 Q6ZR54 194 aa2.76□□□□□ -1.97
TMOD3-207ENST00000560549 MUC7Q8TAX7 377 aa2.76□□□□□ -1.97
TMOD3-207ENST00000560549 KRTAP4-3Q9BYR4 195 aa2.76□□□□□ -1.97
TMOD3-207ENST00000560549 XAGE1AQ9HD64 81 aa2.76□□□□□ -1.97
TMOD3-207ENST00000560549 IGKV2D-24A0A075B6R9 120 aa2.75□□□□□ -1.97
TMOD3-207ENST00000560549 C3orf84H3BNL1 204 aa2.75□□□□□ -1.97
TMOD3-207ENST00000560549 ANAPC13Q9BS18 74 aa2.75□□□□□ -1.97
TMOD3-207ENST00000560549 C8orf17Q9NRJ1 99 aa2.75□□□□□ -1.97
TMOD3-207ENST00000560549 PKIGQ9Y2B9 76 aa2.75□□□□□ -1.97
TMOD3-207ENST00000560549 ZNF706Q9Y5V0 76 aaPredicted RBP2.75□□□□□ -1.97
TMOD3-207ENST00000560549 A0A1B0GVX0 72 aa2.74□□□□□ -1.97
TMOD3-207ENST00000560549 H0YGX0 51 aa2.74□□□□□ -1.97
TMOD3-207ENST00000560549 LECT2O14960 151 aa2.74□□□□□ -1.97
TMOD3-207ENST00000560549 IGLV6-57P01721 117 aa2.74□□□□□ -1.97
TMOD3-207ENST00000560549 C15orf53Q8NAA6 179 aa2.74□□□□□ -1.97
TMOD3-207ENST00000560549 LINC00167Q96N53 147 aa2.74□□□□□ -1.97
TMOD3-207ENST00000560549 HECTD4Q9Y4D8 3996 aa2.73□□□□□ -1.97
TMOD3-207ENST00000560549 TRBV10-3A0A0K0K1G6 114 aa2.73□□□□□ -1.97
TMOD3-207ENST00000560549 FAM236DA0A1B0GTK5 79 aa2.73□□□□□ -1.97
TMOD3-207ENST00000560549 FAM236CP0DP71 79 aa2.73□□□□□ -1.97
TMOD3-207ENST00000560549 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
TMOD3-207ENST00000560549 OBSCN-AS1Q96MR7 158 aa2.73□□□□□ -1.97
TMOD3-207ENST00000560549 APLNQ9ULZ1 77 aa2.73□□□□□ -1.97
TMOD3-207ENST00000560549 SYCNQ0VAF6 134 aa2.72□□□□□ -1.97
TMOD3-207ENST00000560549 S100A7L2Q5SY68 101 aa2.72□□□□□ -1.97
TMOD3-207ENST00000560549 Q6Q795 121 aa2.72□□□□□ -1.97
TMOD3-207ENST00000560549 LINC00575Q6W349 94 aa2.72□□□□□ -1.97
TMOD3-207ENST00000560549 Q8N814 137 aa2.72□□□□□ -1.97
TMOD3-207ENST00000560549 UPK3BQ9BT76 320 aa2.72□□□□□ -1.97
TMOD3-207ENST00000560549 TMEM126AQ9H061 195 aa2.72□□□□□ -1.97
TMOD3-207ENST00000560549 DNAH7Q8WXX0 4024 aa2.72□□□□□ -1.97
TMOD3-207ENST00000560549 NUPR2A6NF83 97 aa2.71□□□□□ -1.97
TMOD3-207ENST00000560549 BPY2O14599 106 aa2.71□□□□□ -1.97
TMOD3-207ENST00000560549 TLX1NBP0CAT3 122 aa2.71□□□□□ -1.97
TMOD3-207ENST00000560549 UBE2AP49459 152 aa2.71□□□□□ -1.97
TMOD3-207ENST00000560549 KRTAP13-3Q3SY46 172 aa2.71□□□□□ -1.97
TMOD3-207ENST00000560549 SMCR5Q8TEV8 140 aa2.71□□□□□ -1.97
TMOD3-207ENST00000560549 M0R378 163 aa2.71□□□□□ -1.98
TMOD3-207ENST00000560549 LINC00313P59037 77 aa2.71□□□□□ -1.98
TMOD3-207ENST00000560549 C14orf132Q9NPU4 83 aa2.71□□□□□ -1.98
TMOD3-207ENST00000560549 ORMDL1Q9P0S3 153 aa2.71□□□□□ -1.98
TMOD3-207ENST00000560549 SS18L2Q9UHA2 77 aa2.71□□□□□ -1.98
TMOD3-207ENST00000560549 TRAV23DV6A0A075B6W5 121 aa2.7□□□□□ -1.98
TMOD3-207ENST00000560549 LCE6AA0A183 80 aa2.7□□□□□ -1.98
TMOD3-207ENST00000560549 A0A1B0GX51 115 aa2.7□□□□□ -1.98
TMOD3-207ENST00000560549 SDIM1Q6ZPB5 146 aa2.7□□□□□ -1.98
TMOD3-207ENST00000560549 hADV29S1A0JD25 119 aa2.69□□□□□ -1.98
TMOD3-207ENST00000560549 A8MU10 97 aa2.69□□□□□ -1.98
TMOD3-207ENST00000560549 M0R2N4 97 aa2.69□□□□□ -1.98
TMOD3-207ENST00000560549 ZNF73O43830 326 aaPredicted RBP2.69□□□□□ -1.98
TMOD3-207ENST00000560549 DNAL4O96015 105 aa2.69□□□□□ -1.98
TMOD3-207ENST00000560549 COX7BP24311 80 aa2.69□□□□□ -1.98
TMOD3-207ENST00000560549 DIRC1Q969H9 104 aa2.69□□□□□ -1.98
TMOD3-207ENST00000560549 ELOF1P60002 83 aaKnown RBP2.68□□□□□ -1.98
TMOD3-207ENST00000560549 Q6ZQY7 126 aa2.68□□□□□ -1.98
TMOD3-207ENST00000560549 RMI2Q96E14 147 aa2.68□□□□□ -1.98
TMOD3-207ENST00000560549 KCNQ1DNQ9H478 68 aa2.68□□□□□ -1.98
TMOD3-207ENST00000560549 STARD9Q9P2P6 4700 aa2.68□□□□□ -1.98
TMOD3-207ENST00000560549 TRBV7-6A0A0J9YX20 115 aa2.67□□□□□ -1.98
TMOD3-207ENST00000560549 A0A1W2PNN7 141 aa2.67□□□□□ -1.98
TMOD3-207ENST00000560549 LRCOL1A6NCL2 159 aa2.67□□□□□ -1.98
TMOD3-207ENST00000560549 LY6G6CO95867 125 aa2.67□□□□□ -1.98
TMOD3-207ENST00000560549 CCKP06307 115 aa2.67□□□□□ -1.98
TMOD3-207ENST00000560549 ACYP1P07311 99 aa2.67□□□□□ -1.98
TMOD3-207ENST00000560549 INAFM2P0DMQ5 153 aa2.67□□□□□ -1.98
TMOD3-207ENST00000560549 Q6ZRN7 208 aaPredicted RBP2.67□□□□□ -1.98
TMOD3-207ENST00000560549 UBE2DNLQ8IWF7 75 aa2.67□□□□□ -1.98
TMOD3-207ENST00000560549 LINC00846Q9NV44 126 aa2.67□□□□□ -1.98
TMOD3-207ENST00000560549 A0A096LNI7 61 aa2.66□□□□□ -1.98
TMOD3-207ENST00000560549 LOC107984640A0A0U1RRK4 108 aa2.66□□□□□ -1.98
TMOD3-207ENST00000560549 TMEM256-PLSCR3K7ERE1 68 aa2.66□□□□□ -1.98
TMOD3-207ENST00000560549 SNCGO76070 127 aa2.66□□□□□ -1.98
TMOD3-207ENST00000560549 KRTAP10-8P60410 259 aa2.66□□□□□ -1.98
TMOD3-207ENST00000560549 LUZP6Q538Z0 58 aa2.66□□□□□ -1.98
TMOD3-207ENST00000560549 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.66□□□□□ -1.98
TMOD3-207ENST00000560549 Q6ZQT0 140 aa2.66□□□□□ -1.98
TMOD3-207ENST00000560549 KRTAP11-1Q8IUC1 163 aa2.66□□□□□ -1.98
TMOD3-207ENST00000560549 CIRBP-AS1Q8TBR5 109 aa2.66□□□□□ -1.98
TMOD3-207ENST00000560549 Q9BRP9 147 aa2.66□□□□□ -1.98
TMOD3-207ENST00000560549 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.65□□□□□ -1.98
TMOD3-207ENST00000560549 IGKV3D-7A0A0C4DH55 119 aa2.65□□□□□ -1.98
TMOD3-207ENST00000560549 TRBV7-7A0A0K0K1E9 115 aa2.65□□□□□ -1.98
TMOD3-207ENST00000560549 NBDYA0A0U1RRE5 68 aa2.65□□□□□ -1.98
TMOD3-207ENST00000560549 ERC2-IT1O76042 136 aa2.65□□□□□ -1.98
TMOD3-207ENST00000560549 SPRR1AP35321 89 aa2.65□□□□□ -1.98
TMOD3-207ENST00000560549 FUSP35637 526 aaKnown RBP eCLIP2.65□□□□□ -1.98
TMOD3-207ENST00000560549 CNBPP62633 177 aaKnown RBP2.65□□□□□ -1.98
TMOD3-207ENST00000560549 RPS28P62857 69 aaKnown RBP2.65□□□□□ -1.98
TMOD3-207ENST00000560549 LINC00643Q86TS7 51 aa2.65□□□□□ -1.98
TMOD3-207ENST00000560549 IMUPQ9GZP8 106 aa2.65□□□□□ -1.98
TMOD3-207ENST00000560549 SRRM2Q9UQ35 2752 aaKnown RBP2.65□□□□□ -1.98
TMOD3-207ENST00000560549 LOC110117498A0A087WWA1 95 aa2.65□□□□□ -1.99
TMOD3-207ENST00000560549 IGKV2-24A0A0C4DH68 120 aa2.65□□□□□ -1.99
TMOD3-207ENST00000560549 JMJD7-PLA2G4BH0Y9G9 81 aa2.65□□□□□ -1.99
TMOD3-207ENST00000560549 PANO1I0J062 215 aa2.65□□□□□ -1.99
TMOD3-207ENST00000560549 PLECQ15149 4684 aaKnown RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms