RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 MYCBP2O75592 4640 aa0.43□□□□□ -2.34
USP8-211ENST00000560527 PIN1P1O15428 100 aa0.43□□□□□ -2.34
USP8-211ENST00000560527 BCE1O60756 84 aa0.43□□□□□ -2.34
USP8-211ENST00000560527 LEPROTL1O95214 131 aa0.43□□□□□ -2.34
USP8-211ENST00000560527 SMIM11AP58511 58 aa0.43□□□□□ -2.34
USP8-211ENST00000560527 WFDC2Q14508 124 aa0.43□□□□□ -2.34
USP8-211ENST00000560527 NMSQ5H8A3 153 aa0.43□□□□□ -2.34
USP8-211ENST00000560527 ALKAL2Q6UX46 152 aa0.43□□□□□ -2.34
USP8-211ENST00000560527 TMEM263Q8WUH6 116 aaKnown RBP0.43□□□□□ -2.34
USP8-211ENST00000560527 SPCS1Q9Y6A9 102 aa0.43□□□□□ -2.34
USP8-211ENST00000560527 CLIP1P30622 1438 aa0.43□□□□□ -2.34
USP8-211ENST00000560527 A0A0G2JMZ2 1700 aa0.43□□□□□ -2.34
USP8-211ENST00000560527 POLR1AO95602 1720 aaPredicted RBP0.43□□□□□ -2.34
USP8-211ENST00000560527 PLIN4Q96Q06 1357 aa0.43□□□□□ -2.34
USP8-211ENST00000560527 DYNC2H1Q8NCM8 4307 aaKnown RBP0.42□□□□□ -2.34
USP8-211ENST00000560527 DNAJC13O75165 2243 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 CACNA1CQ13936 2221 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 DEPDC5O75140 1603 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 NLRP1Q9C000 1473 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 UACAQ9BZF9 1416 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 ANK2Q01484 3957 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 D6R8Y8 96 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 H3BQF6 201 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 PRH1P02810 166 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 GNGT1P63211 74 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 KRTAP19-6Q3LI70 58 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 MUSTN1Q8IVN3 82 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 LINC01600Q96MT4 127 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 S100A13Q99584 98 aa0.42□□□□□ -2.34
USP8-211ENST00000560527 POLA1P09884 1462 aaPredicted RBP0.41□□□□□ -2.34
USP8-211ENST00000560527 ATP7BP35670 1465 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 AHCTF1Q8WYP5 2266 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 PKHD1P08F94 4074 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 CEP162Q5TB80 1403 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 TRBV6-1A0A0K0K1D8 114 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 IQCF6A8MYZ5 107 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 HMGN2P05204 90 aaKnown RBP0.41□□□□□ -2.34
USP8-211ENST00000560527 SNRPFP62306 86 aaKnown RBP0.41□□□□□ -2.34
USP8-211ENST00000560527 ADIRFQ15847 76 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 ST20Q9HBF5 79 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 LINC00846Q9NV44 126 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 PLAC8Q9NZF1 115 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 RABAC1Q9UI14 185 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 LMTK2Q8IWU2 1503 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 LRP2P98164 4655 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 HSPG2P98160 4391 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 LRP1BQ9NZR2 4599 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 CRYBG1Q9Y4K1 1723 aa0.41□□□□□ -2.34
USP8-211ENST00000560527 A0A1B0GU69 56 aa0.4□□□□□ -2.35
USP8-211ENST00000560527 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
USP8-211ENST00000560527 H0Y9P7 68 aa0.4□□□□□ -2.35
USP8-211ENST00000560527 S100A3P33764 101 aa0.4□□□□□ -2.35
USP8-211ENST00000560527 HMGN3Q15651 99 aa0.4□□□□□ -2.35
USP8-211ENST00000560527 C6orf201Q7Z4U5 140 aa0.4□□□□□ -2.35
USP8-211ENST00000560527 KIF20BQ96Q89 1820 aa0.4□□□□□ -2.35
USP8-211ENST00000560527 LRP1Q07954 4544 aaKnown RBP0.4□□□□□ -2.35
USP8-211ENST00000560527 C5P01031 1676 aa0.4□□□□□ -2.35
USP8-211ENST00000560527 NHSQ6T4R5 1651 aa0.4□□□□□ -2.35
USP8-211ENST00000560527 DYNC1H1Q14204 4646 aaKnown RBP0.39□□□□□ -2.35
USP8-211ENST00000560527 FXYD6-FXYD2A0A087WZ82 144 aa0.39□□□□□ -2.35
USP8-211ENST00000560527 A0A0D9SFI3 127 aa0.39□□□□□ -2.35
USP8-211ENST00000560527 MYMXA0A1B0GTQ4 84 aa0.39□□□□□ -2.35
USP8-211ENST00000560527 LINC00959A0A1B0GUT2 108 aa0.39□□□□□ -2.35
USP8-211ENST00000560527 KANTRA0A1W2PQU2 76 aa0.39□□□□□ -2.35
USP8-211ENST00000560527 H3BUT2 72 aa0.39□□□□□ -2.35
USP8-211ENST00000560527 IGLC3P0DOY3 106 aa0.39□□□□□ -2.35
USP8-211ENST00000560527 COX6A2Q02221 97 aa0.39□□□□□ -2.35
USP8-211ENST00000560527 LINC00643Q86TS7 51 aa0.39□□□□□ -2.35
USP8-211ENST00000560527 PRO0255Q9UI72 69 aa0.39□□□□□ -2.35
USP8-211ENST00000560527 HECTD4Q9Y4D8 3996 aa0.39□□□□□ -2.35
USP8-211ENST00000560527 STARD9Q9P2P6 4700 aa0.39□□□□□ -2.35
USP8-211ENST00000560527 AGLP35573 1532 aa0.38□□□□□ -2.35
USP8-211ENST00000560527 XRN1Q8IZH2 1706 aaKnown RBP0.38□□□□□ -2.35
USP8-211ENST00000560527 CEBPZOSA8MTT3 80 aa0.38□□□□□ -2.35
USP8-211ENST00000560527 LOC730098B7Z3J9 87 aa0.38□□□□□ -2.35
USP8-211ENST00000560527 ACYP1P07311 99 aa0.38□□□□□ -2.35
USP8-211ENST00000560527 IGLC2P0DOY2 106 aa0.38□□□□□ -2.35
USP8-211ENST00000560527 PLGLAQ15195 96 aa0.38□□□□□ -2.35
USP8-211ENST00000560527 BVES-AS1Q5T3Y7 98 aa0.38□□□□□ -2.35
USP8-211ENST00000560527 TP53AIP1Q9HCN2 124 aa0.38□□□□□ -2.35
USP8-211ENST00000560527 CRIPTQ9P021 101 aa0.38□□□□□ -2.35
USP8-211ENST00000560527 UBE2D4Q9Y2X8 147 aa0.38□□□□□ -2.35
USP8-211ENST00000560527 LRRIQ1Q96JM4 1722 aa0.38□□□□□ -2.35
USP8-211ENST00000560527 CSMD3Q7Z407 3707 aa0.38□□□□□ -2.35
USP8-211ENST00000560527 ERICH3Q5RHP9 1530 aa0.38□□□□□ -2.35
USP8-211ENST00000560527 PLECQ15149 4684 aaKnown RBP0.37□□□□□ -2.35
USP8-211ENST00000560527 RGPD2P0DJD1 1756 aa0.37□□□□□ -2.35
USP8-211ENST00000560527 NCOA2Q15596 1464 aa0.37□□□□□ -2.35
USP8-211ENST00000560527 TRBV7-4A0A0J9YYF1 115 aa0.37□□□□□ -2.35
USP8-211ENST00000560527 I3L2K1 104 aa0.37□□□□□ -2.35
USP8-211ENST00000560527 MT4P47944 62 aa0.37□□□□□ -2.35
USP8-211ENST00000560527 DEFB112Q30KQ8 113 aa0.37□□□□□ -2.35
USP8-211ENST00000560527 DEFB124Q8NES8 71 aa0.37□□□□□ -2.35
USP8-211ENST00000560527 CMYA5Q8N3K9 4069 aa0.37□□□□□ -2.35
USP8-211ENST00000560527 CLTCL1P53675 1640 aa0.37□□□□□ -2.35
USP8-211ENST00000560527 ABCA5Q8WWZ7 1642 aa0.37□□□□□ -2.35
USP8-211ENST00000560527 TRRAPQ9Y4A5 3859 aa0.37□□□□□ -2.35
USP8-211ENST00000560527 UBR3Q6ZT12 1888 aa0.37□□□□□ -2.35
USP8-211ENST00000560527 FAT1Q14517 4588 aa0.36□□□□□ -2.35
USP8-211ENST00000560527 DNAH9Q9NYC9 4486 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms