RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 RAB37Q96AX2 223 aa5.34□□□□□ -1.55
HERC1-209ENST00000560519 DHRS4-AS1Q9P1J3 65 aa5.34□□□□□ -1.55
HERC1-209ENST00000560519 A0A0B4J2C4 111 aa5.33□□□□□ -1.56
HERC1-209ENST00000560519 ELOF1P60002 83 aaKnown RBP5.33□□□□□ -1.56
HERC1-209ENST00000560519 C9orf153Q5TBE3 101 aa5.33□□□□□ -1.56
HERC1-209ENST00000560519 SMIM11BQ8TCY0 68 aa5.33□□□□□ -1.56
HERC1-209ENST00000560519 C12orf57Q99622 126 aa5.33□□□□□ -1.56
HERC1-209ENST00000560519 LIMD2Q9BT23 127 aa5.33□□□□□ -1.56
HERC1-209ENST00000560519 CFC1P0CG37 223 aa5.32□□□□□ -1.56
HERC1-209ENST00000560519 Q9BRP9 147 aa5.32□□□□□ -1.56
HERC1-209ENST00000560519 PRO1933Q9H354 126 aa5.32□□□□□ -1.56
HERC1-209ENST00000560519 NHP2Q9NX24 153 aaKnown RBP5.32□□□□□ -1.56
HERC1-209ENST00000560519 TSTD3H0UI37 97 aa5.31□□□□□ -1.56
HERC1-209ENST00000560519 FXYD2P54710 66 aa5.3□□□□□ -1.56
HERC1-209ENST00000560519 MT1HP80294 61 aa5.3□□□□□ -1.56
HERC1-209ENST00000560519 BVES-AS1Q5T3Y7 98 aa5.3□□□□□ -1.56
HERC1-209ENST00000560519 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
HERC1-209ENST00000560519 PRO1854Q9UHT4 67 aa5.3□□□□□ -1.56
HERC1-209ENST00000560519 H7C2G1 150 aa5.29□□□□□ -1.56
HERC1-209ENST00000560519 ERC2-IT1O76042 136 aa5.29□□□□□ -1.56
HERC1-209ENST00000560519 Q1RN00 199 aa5.29□□□□□ -1.56
HERC1-209ENST00000560519 M0R143 59 aa5.28□□□□□ -1.56
HERC1-209ENST00000560519 SNCGO76070 127 aa5.28□□□□□ -1.56
HERC1-209ENST00000560519 IGLV8-61A0A075B6I0 122 aa5.27□□□□□ -1.57
HERC1-209ENST00000560519 H0YGX0 51 aa5.26□□□□□ -1.57
HERC1-209ENST00000560519 PCOTHQ58A44 107 aa5.26□□□□□ -1.57
HERC1-209ENST00000560519 LINC00575Q6W349 94 aa5.26□□□□□ -1.57
HERC1-209ENST00000560519 hADV29S1A0JD25 119 aa5.25□□□□□ -1.57
HERC1-209ENST00000560519 SPRR1BP22528 89 aa5.25□□□□□ -1.57
HERC1-209ENST00000560519 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
HERC1-209ENST00000560519 ST20-AS1Q8NBB2 130 aa5.25□□□□□ -1.57
HERC1-209ENST00000560519 TEX49A0A1B0GTD5 131 aa5.24□□□□□ -1.57
HERC1-209ENST00000560519 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.24□□□□□ -1.57
HERC1-209ENST00000560519 K7ERJ3 54 aa5.24□□□□□ -1.57
HERC1-209ENST00000560519 COX6CP09669 75 aa5.24□□□□□ -1.57
HERC1-209ENST00000560519 LAMTOR3Q9UHA4 124 aa5.24□□□□□ -1.57
HERC1-209ENST00000560519 M0R2T5 61 aa5.23□□□□□ -1.57
HERC1-209ENST00000560519 PSMB2P49721 201 aa5.23□□□□□ -1.57
HERC1-209ENST00000560519 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.23□□□□□ -1.57
HERC1-209ENST00000560519 DEFB105AQ8NG35 78 aa5.23□□□□□ -1.57
HERC1-209ENST00000560519 IGLV5-48A0A075B6I7 105 aa5.22□□□□□ -1.57
HERC1-209ENST00000560519 A0A1B0GX51 115 aa5.22□□□□□ -1.57
HERC1-209ENST00000560519 C9orf92A6NGG3 77 aa5.22□□□□□ -1.57
HERC1-209ENST00000560519 KRTAP10-6P60371 365 aaPredicted RBP5.22□□□□□ -1.57
HERC1-209ENST00000560519 TRIAP1O43715 76 aa5.21□□□□□ -1.58
HERC1-209ENST00000560519 OCIAD2Q56VL3 154 aa5.21□□□□□ -1.58
HERC1-209ENST00000560519 COX6B2Q6YFQ2 88 aa5.21□□□□□ -1.58
HERC1-209ENST00000560519 Q6ZQY7 126 aa5.21□□□□□ -1.58
HERC1-209ENST00000560519 PPDPFLQ8WWR9 84 aa5.21□□□□□ -1.58
HERC1-209ENST00000560519 CD164Q04900 197 aa5.2□□□□□ -1.58
HERC1-209ENST00000560519 F8WEM9 126 aa5.19□□□□□ -1.58
HERC1-209ENST00000560519 SCGB1C2P0DMR2 95 aa5.19□□□□□ -1.58
HERC1-209ENST00000560519 HRCT1Q6UXD1 115 aa5.19□□□□□ -1.58
HERC1-209ENST00000560519 DNAL4O96015 105 aa5.18□□□□□ -1.58
HERC1-209ENST00000560519 BATFQ16520 125 aa5.18□□□□□ -1.58
HERC1-209ENST00000560519 SNHG12Q9BXW3 62 aa5.18□□□□□ -1.58
HERC1-209ENST00000560519 H3BQ85 93 aa5.17□□□□□ -1.58
HERC1-209ENST00000560519 RPL37P61927 97 aaKnown RBP5.17□□□□□ -1.58
HERC1-209ENST00000560519 FAM218AQ96MZ4 157 aa5.17□□□□□ -1.58
HERC1-209ENST00000560519 LYRM7Q5U5X0 104 aa5.16□□□□□ -1.58
HERC1-209ENST00000560519 Q5XG85 94 aa5.16□□□□□ -1.58
HERC1-209ENST00000560519 SMIM29Q86T20 159 aa5.16□□□□□ -1.58
HERC1-209ENST00000560519 CLEC2BQ92478 149 aa5.16□□□□□ -1.58
HERC1-209ENST00000560519 TRACP01848 142 aa5.14□□□□□ -1.59
HERC1-209ENST00000560519 Q6JHZ5 121 aa5.14□□□□□ -1.59
HERC1-209ENST00000560519 ORMDL1Q9P0S3 153 aa5.14□□□□□ -1.59
HERC1-209ENST00000560519 LST1O00453 97 aa5.13□□□□□ -1.59
HERC1-209ENST00000560519 FABP2P12104 132 aa5.13□□□□□ -1.59
HERC1-209ENST00000560519 TMEM256-PLSCR3K7ERE1 68 aa5.12□□□□□ -1.59
HERC1-209ENST00000560519 ATXN8Q156A1 80 aa5.12□□□□□ -1.59
HERC1-209ENST00000560519 TRBV20-1A0A075B6N2 111 aa5.11□□□□□ -1.59
HERC1-209ENST00000560519 NDUFV3P56181 108 aaKnown RBP5.11□□□□□ -1.59
HERC1-209ENST00000560519 C1orf195Q5TG92 126 aa5.11□□□□□ -1.59
HERC1-209ENST00000560519 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
HERC1-209ENST00000560519 H3BUT2 72 aa5.1□□□□□ -1.59
HERC1-209ENST00000560519 TCL1BO95988 128 aa5.1□□□□□ -1.59
HERC1-209ENST00000560519 NAA38Q9BRA0 125 aaKnown RBP5.1□□□□□ -1.59
HERC1-209ENST00000560519 H3BMG7 143 aa5.09□□□□□ -1.59
HERC1-209ENST00000560519 UBE2V1Q13404 147 aa5.09□□□□□ -1.59
HERC1-209ENST00000560519 COL5A1-AS1Q5SY13 56 aa5.09□□□□□ -1.59
HERC1-209ENST00000560519 PCP4L1A6NKN8 68 aa5.08□□□□□ -1.6
HERC1-209ENST00000560519 TAX1BP3O14907 124 aa5.08□□□□□ -1.6
HERC1-209ENST00000560519 IGFL1Q6UW32 110 aa5.08□□□□□ -1.6
HERC1-209ENST00000560519 A0A1W2PPM0 123 aa5.07□□□□□ -1.6
HERC1-209ENST00000560519 KRTAP9-7A8MTY7 169 aa5.07□□□□□ -1.6
HERC1-209ENST00000560519 BAALC-AS2P0C853 105 aa5.07□□□□□ -1.6
HERC1-209ENST00000560519 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
HERC1-209ENST00000560519 A0A0G2JQZ4 141 aa5.05□□□□□ -1.6
HERC1-209ENST00000560519 TRBV7-7A0A0K0K1E9 115 aa5.05□□□□□ -1.6
HERC1-209ENST00000560519 Q6Q795 121 aa5.05□□□□□ -1.6
HERC1-209ENST00000560519 ATP11AUNQ6ZP68 121 aa5.05□□□□□ -1.6
HERC1-209ENST00000560519 ANKRD29Q8N6D5 301 aa5.05□□□□□ -1.6
HERC1-209ENST00000560519 TEN1Q86WV5 123 aa5.04□□□□□ -1.6
HERC1-209ENST00000560519 C9JAW5 83 aa5.03□□□□□ -1.6
HERC1-209ENST00000560519 RBM3P98179 157 aaKnown RBP5.03□□□□□ -1.6
HERC1-209ENST00000560519 Q75L30 129 aa5.03□□□□□ -1.6
HERC1-209ENST00000560519 SS18L2Q9UHA2 77 aa5.03□□□□□ -1.6
HERC1-209ENST00000560519 A0A1B0GV72 72 aa5.02□□□□□ -1.61
HERC1-209ENST00000560519 JMJD7-PLA2G4BH0Y9G9 81 aa5.02□□□□□ -1.61
HERC1-209ENST00000560519 DSCR8Q96T75 97 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms