RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 ACYP1P07311 99 aa6.67□□□□□ -1.34
SNRPA1-211ENST00000560433 RYR3Q15413 4870 aa6.67□□□□□ -1.34
SNRPA1-211ENST00000560433 H3BQ85 93 aa6.66□□□□□ -1.34
SNRPA1-211ENST00000560433 VPS13BQ7Z7G8 4022 aa6.66□□□□□ -1.34
SNRPA1-211ENST00000560433 LOC110117498A0A087WWA1 95 aa6.66□□□□□ -1.34
SNRPA1-211ENST00000560433 KRTAP13-1Q8IUC0 172 aa6.66□□□□□ -1.34
SNRPA1-211ENST00000560433 ANAPC11Q9NYG5 84 aa6.65□□□□□ -1.34
SNRPA1-211ENST00000560433 DYNC1H1Q14204 4646 aaKnown RBP6.65□□□□□ -1.35
SNRPA1-211ENST00000560433 IGKV3D-7A0A0C4DH55 119 aa6.64□□□□□ -1.35
SNRPA1-211ENST00000560433 H0Y9J4 135 aa6.64□□□□□ -1.35
SNRPA1-211ENST00000560433 Q6ZSA8 131 aa6.62□□□□□ -1.35
SNRPA1-211ENST00000560433 A0A1W2PNM2 257 aa6.6□□□□□ -1.35
SNRPA1-211ENST00000560433 LINC00643Q86TS7 51 aa6.6□□□□□ -1.35
SNRPA1-211ENST00000560433 IGLV9-49A0A0B4J1Y8 123 aa6.6□□□□□ -1.35
SNRPA1-211ENST00000560433 F8WEM9 126 aa6.6□□□□□ -1.35
SNRPA1-211ENST00000560433 ZNF861PO60384 105 aa6.59□□□□□ -1.35
SNRPA1-211ENST00000560433 PDE6GP18545 87 aa6.59□□□□□ -1.35
SNRPA1-211ENST00000560433 IGFL1Q6UW32 110 aa6.59□□□□□ -1.35
SNRPA1-211ENST00000560433 UBL5Q9BZL1 73 aa6.59□□□□□ -1.35
SNRPA1-211ENST00000560433 IGLV7-43P04211 117 aa6.58□□□□□ -1.36
SNRPA1-211ENST00000560433 Q6ZVQ6 151 aa6.58□□□□□ -1.36
SNRPA1-211ENST00000560433 FAT1Q14517 4588 aa6.58□□□□□ -1.36
SNRPA1-211ENST00000560433 A0A087WVE0 104 aa6.57□□□□□ -1.36
SNRPA1-211ENST00000560433 SPRR4Q96PI1 79 aa6.57□□□□□ -1.36
SNRPA1-211ENST00000560433 A0A1B0GVY2 172 aa6.57□□□□□ -1.36
SNRPA1-211ENST00000560433 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
SNRPA1-211ENST00000560433 LINC00336Q6ZUF6 198 aa6.57□□□□□ -1.36
SNRPA1-211ENST00000560433 APOBP04114 4563 aaKnown RBP6.56□□□□□ -1.36
SNRPA1-211ENST00000560433 SPRR1BP22528 89 aa6.55□□□□□ -1.36
SNRPA1-211ENST00000560433 C9orf153Q5TBE3 101 aa6.55□□□□□ -1.36
SNRPA1-211ENST00000560433 SEC61GP60059 68 aa6.55□□□□□ -1.36
SNRPA1-211ENST00000560433 HIST1H4AP62805 103 aaKnown RBP6.55□□□□□ -1.36
SNRPA1-211ENST00000560433 Q8NBF4 154 aa6.55□□□□□ -1.36
SNRPA1-211ENST00000560433 HRCT1Q6UXD1 115 aa6.54□□□□□ -1.36
SNRPA1-211ENST00000560433 TRBV7-7A0A0K0K1E9 115 aa6.54□□□□□ -1.36
SNRPA1-211ENST00000560433 Q6JHZ5 121 aa6.54□□□□□ -1.36
SNRPA1-211ENST00000560433 NREPQ16612 68 aa6.52□□□□□ -1.36
SNRPA1-211ENST00000560433 DEFB116Q30KQ4 102 aa6.52□□□□□ -1.36
SNRPA1-211ENST00000560433 Q8N9L7 120 aa6.52□□□□□ -1.36
SNRPA1-211ENST00000560433 A0A087WSZ3 146 aa6.52□□□□□ -1.37
SNRPA1-211ENST00000560433 MOBPQ13875 183 aa6.51□□□□□ -1.37
SNRPA1-211ENST00000560433 IGLV8-61A0A075B6I0 122 aa6.51□□□□□ -1.37
SNRPA1-211ENST00000560433 FAM236AA0A1B0GUQ0 79 aa6.51□□□□□ -1.37
SNRPA1-211ENST00000560433 FAM236BA0A1B0GV22 79 aa6.51□□□□□ -1.37
SNRPA1-211ENST00000560433 LINC00483Q53H64 154 aa6.5□□□□□ -1.37
SNRPA1-211ENST00000560433 CRYGAP11844 174 aa6.49□□□□□ -1.37
SNRPA1-211ENST00000560433 Q6Q795 121 aa6.49□□□□□ -1.37
SNRPA1-211ENST00000560433 ZNF706Q9Y5V0 76 aaPredicted RBP6.49□□□□□ -1.37
SNRPA1-211ENST00000560433 SCGB1A1P11684 91 aa6.49□□□□□ -1.37
SNRPA1-211ENST00000560433 IMUPQ9GZP8 106 aa6.47□□□□□ -1.37
SNRPA1-211ENST00000560433 A0A087X002 238 aa6.47□□□□□ -1.37
SNRPA1-211ENST00000560433 BPY2O14599 106 aa6.47□□□□□ -1.37
SNRPA1-211ENST00000560433 ATP5EP2Q5VTU8 51 aa6.45□□□□□ -1.38
SNRPA1-211ENST00000560433 ANAPC13Q9BS18 74 aa6.45□□□□□ -1.38
SNRPA1-211ENST00000560433 EPPK1P58107 5090 aaKnown RBP6.44□□□□□ -1.38
SNRPA1-211ENST00000560433 RPL37AP61513 92 aaKnown RBP6.44□□□□□ -1.38
SNRPA1-211ENST00000560433 C5orf47Q569G3 176 aa6.44□□□□□ -1.38
SNRPA1-211ENST00000560433 CXCL6P80162 114 aa6.44□□□□□ -1.38
SNRPA1-211ENST00000560433 KRTAP13-2Q52LG2 175 aa6.42□□□□□ -1.38
SNRPA1-211ENST00000560433 KRTAP1-4P0C5Y4 121 aa6.41□□□□□ -1.38
SNRPA1-211ENST00000560433 DSCR10P59022 87 aa6.41□□□□□ -1.38
SNRPA1-211ENST00000560433 HSPG2P98160 4391 aa6.41□□□□□ -1.38
SNRPA1-211ENST00000560433 A0A1B0GW54 56 aa6.4□□□□□ -1.38
SNRPA1-211ENST00000560433 K7EQZ3 153 aa6.4□□□□□ -1.38
SNRPA1-211ENST00000560433 IGKV4-1P06312 121 aa6.4□□□□□ -1.38
SNRPA1-211ENST00000560433 PLA2G1BP04054 148 aaKnown RBP6.39□□□□□ -1.39
SNRPA1-211ENST00000560433 KIAA1109Q2LD37 5005 aa6.38□□□□□ -1.39
SNRPA1-211ENST00000560433 CCDC179H3BU77 68 aa6.36□□□□□ -1.39
SNRPA1-211ENST00000560433 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
SNRPA1-211ENST00000560433 LINC00472Q9H8W2 130 aa6.36□□□□□ -1.39
SNRPA1-211ENST00000560433 PRR26Q8N8Z3 221 aa6.35□□□□□ -1.39
SNRPA1-211ENST00000560433 SPINK6Q6UWN8 80 aa6.35□□□□□ -1.39
SNRPA1-211ENST00000560433 Q96NJ1 140 aa6.35□□□□□ -1.39
SNRPA1-211ENST00000560433 RYR1P21817 5038 aa6.34□□□□□ -1.39
SNRPA1-211ENST00000560433 LRP1Q07954 4544 aaKnown RBP6.34□□□□□ -1.39
SNRPA1-211ENST00000560433 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.4
SNRPA1-211ENST00000560433 ATOX1O00244 68 aa6.33□□□□□ -1.4
SNRPA1-211ENST00000560433 SSBP3-AS1Q7Z2R9 100 aa6.33□□□□□ -1.4
SNRPA1-211ENST00000560433 WFDC13Q8IUB5 93 aa6.32□□□□□ -1.4
SNRPA1-211ENST00000560433 TYMSOSQ8TAI1 123 aa6.32□□□□□ -1.4
SNRPA1-211ENST00000560433 FAM229BQ4G0N7 80 aa6.31□□□□□ -1.4
SNRPA1-211ENST00000560433 PKHD1L1Q86WI1 4243 aa6.31□□□□□ -1.4
SNRPA1-211ENST00000560433 SS18L2Q9UHA2 77 aa6.29□□□□□ -1.4
SNRPA1-211ENST00000560433 A8MWP4 228 aa6.28□□□□□ -1.4
SNRPA1-211ENST00000560433 Q5VSD8 79 aa6.28□□□□□ -1.4
SNRPA1-211ENST00000560433 PRR15Q8IV56 129 aa6.28□□□□□ -1.4
SNRPA1-211ENST00000560433 HCG22E2RYF7 251 aa6.27□□□□□ -1.41
SNRPA1-211ENST00000560433 SERP2Q8N6R1 65 aa6.27□□□□□ -1.41
SNRPA1-211ENST00000560433 IGHV6-1A0A0B4J1U7 121 aa6.27□□□□□ -1.41
SNRPA1-211ENST00000560433 FAM229AH3BQW9 127 aa6.27□□□□□ -1.41
SNRPA1-211ENST00000560433 COX7CP15954 63 aa6.27□□□□□ -1.41
SNRPA1-211ENST00000560433 FLG2Q5D862 2391 aaPredicted RBP6.27□□□□□ -1.41
SNRPA1-211ENST00000560433 NOTCH2NLQ7Z3S9 236 aa6.26□□□□□ -1.41
SNRPA1-211ENST00000560433 CYSTM1Q9H1C7 97 aa6.26□□□□□ -1.41
SNRPA1-211ENST00000560433 MYCBP2O75592 4640 aa6.25□□□□□ -1.41
SNRPA1-211ENST00000560433 CD164Q04900 197 aa6.25□□□□□ -1.41
SNRPA1-211ENST00000560433 NDUFB1O75438 58 aa6.24□□□□□ -1.41
SNRPA1-211ENST00000560433 UQCRQO14949 82 aa6.24□□□□□ -1.41
SNRPA1-211ENST00000560433 CDK2AP2O75956 126 aa6.24□□□□□ -1.41
SNRPA1-211ENST00000560433 J3KT08 172 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms