RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 ZNF861PO60384 105 aa8.85□□□□□ -0.99
ZEB1-218ENST00000560196 SMIM29Q86T20 159 aa8.85□□□□□ -0.99
ZEB1-218ENST00000560196 IGLV7-43P04211 117 aa8.83□□□□□ -1
ZEB1-218ENST00000560196 IGLV8-61A0A075B6I0 122 aa8.82□□□□□ -1
ZEB1-218ENST00000560196 C3orf22Q8N5N4 141 aa8.82□□□□□ -1
ZEB1-218ENST00000560196 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
ZEB1-218ENST00000560196 F8WEM9 126 aa8.8□□□□□ -1
ZEB1-218ENST00000560196 LINC00483Q53H64 154 aa8.8□□□□□ -1
ZEB1-218ENST00000560196 SPRR4Q96PI1 79 aa8.8□□□□□ -1
ZEB1-218ENST00000560196 RYR2Q92736 4967 aa8.78□□□□□ -1
ZEB1-218ENST00000560196 SIGMAR1Q99720 223 aa8.78□□□□□ -1
ZEB1-218ENST00000560196 LINC00846Q9NV44 126 aa8.78□□□□□ -1
ZEB1-218ENST00000560196 A0A1B0GW54 56 aa8.77□□□□□ -1.01
ZEB1-218ENST00000560196 XGP55808 180 aa8.77□□□□□ -1.01
ZEB1-218ENST00000560196 LINC00643Q86TS7 51 aa8.76□□□□□ -1.01
ZEB1-218ENST00000560196 HAMPP81172 84 aa8.75□□□□□ -1.01
ZEB1-218ENST00000560196 Q6JHZ5 121 aa8.75□□□□□ -1.01
ZEB1-218ENST00000560196 A0A1W2PNM2 257 aa8.73□□□□□ -1.01
ZEB1-218ENST00000560196 MT-ATP8P03928 68 aa8.73□□□□□ -1.01
ZEB1-218ENST00000560196 Q8NBF4 154 aa8.73□□□□□ -1.01
ZEB1-218ENST00000560196 RPL37AP61513 92 aaKnown RBP8.72□□□□□ -1.01
ZEB1-218ENST00000560196 UBL5Q9BZL1 73 aa8.72□□□□□ -1.01
ZEB1-218ENST00000560196 IGFL1Q6UW32 110 aa8.71□□□□□ -1.02
ZEB1-218ENST00000560196 CRYGAP11844 174 aa8.69□□□□□ -1.02
ZEB1-218ENST00000560196 Q6Q795 121 aa8.69□□□□□ -1.02
ZEB1-218ENST00000560196 DYNC1H1Q14204 4646 aaKnown RBP8.69□□□□□ -1.02
ZEB1-218ENST00000560196 LRP1BQ9NZR2 4599 aa8.68□□□□□ -1.02
ZEB1-218ENST00000560196 ATP5EP2Q5VTU8 51 aa8.68□□□□□ -1.02
ZEB1-218ENST00000560196 KMT2CQ8NEZ4 4911 aaKnown RBP8.68□□□□□ -1.02
ZEB1-218ENST00000560196 TRBV7-7A0A0K0K1E9 115 aa8.67□□□□□ -1.02
ZEB1-218ENST00000560196 Q6ZVQ6 151 aa8.67□□□□□ -1.02
ZEB1-218ENST00000560196 IMUPQ9GZP8 106 aa8.66□□□□□ -1.02
ZEB1-218ENST00000560196 SCGB1A1P11684 91 aa8.64□□□□□ -1.03
ZEB1-218ENST00000560196 FAM229BQ4G0N7 80 aa8.64□□□□□ -1.03
ZEB1-218ENST00000560196 IGLV9-49A0A0B4J1Y8 123 aa8.63□□□□□ -1.03
ZEB1-218ENST00000560196 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
ZEB1-218ENST00000560196 NREPQ16612 68 aa8.62□□□□□ -1.03
ZEB1-218ENST00000560196 A0A0G2JQZ4 141 aa8.61□□□□□ -1.03
ZEB1-218ENST00000560196 LCE2AQ5TA79 106 aaPredicted RBP8.61□□□□□ -1.03
ZEB1-218ENST00000560196 SPINK6Q6UWN8 80 aa8.61□□□□□ -1.03
ZEB1-218ENST00000560196 ANAPC11Q9NYG5 84 aa8.61□□□□□ -1.03
ZEB1-218ENST00000560196 PKHD1P08F94 4074 aa8.61□□□□□ -1.03
ZEB1-218ENST00000560196 CXCL6P80162 114 aa8.6□□□□□ -1.03
ZEB1-218ENST00000560196 MOBPQ13875 183 aa8.6□□□□□ -1.03
ZEB1-218ENST00000560196 SSBP3-AS1Q7Z2R9 100 aa8.6□□□□□ -1.03
ZEB1-218ENST00000560196 IGKV3D-7A0A0C4DH55 119 aa8.59□□□□□ -1.03
ZEB1-218ENST00000560196 SMR3BP02814 79 aaPredicted RBP8.58□□□□□ -1.04
ZEB1-218ENST00000560196 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
ZEB1-218ENST00000560196 KRTAP10-4P60372 401 aaPredicted RBP8.58□□□□□ -1.04
ZEB1-218ENST00000560196 CDK2AP2O75956 126 aa8.57□□□□□ -1.04
ZEB1-218ENST00000560196 SRRM2Q9UQ35 2752 aaKnown RBP8.57□□□□□ -1.04
ZEB1-218ENST00000560196 A0A087WSZ3 146 aa8.56□□□□□ -1.04
ZEB1-218ENST00000560196 APOBP04114 4563 aaKnown RBP8.56□□□□□ -1.04
ZEB1-218ENST00000560196 CD164Q04900 197 aa8.55□□□□□ -1.04
ZEB1-218ENST00000560196 LCE2CQ5TA81 110 aa8.54□□□□□ -1.04
ZEB1-218ENST00000560196 BPY2O14599 106 aa8.53□□□□□ -1.04
ZEB1-218ENST00000560196 KRTAP13-2Q52LG2 175 aa8.53□□□□□ -1.04
ZEB1-218ENST00000560196 A0A087X002 238 aa8.52□□□□□ -1.05
ZEB1-218ENST00000560196 PLA2G1BP04054 148 aaKnown RBP8.51□□□□□ -1.05
ZEB1-218ENST00000560196 VPS13BQ7Z7G8 4022 aa8.51□□□□□ -1.05
ZEB1-218ENST00000560196 SS18L2Q9UHA2 77 aa8.5□□□□□ -1.05
ZEB1-218ENST00000560196 FAM229AH3BQW9 127 aa8.49□□□□□ -1.05
ZEB1-218ENST00000560196 RYR3Q15413 4870 aa8.48□□□□□ -1.05
ZEB1-218ENST00000560196 HIST1H4AP62805 103 aaKnown RBP8.48□□□□□ -1.05
ZEB1-218ENST00000560196 LINC00472Q9H8W2 130 aa8.48□□□□□ -1.05
ZEB1-218ENST00000560196 HRCT1Q6UXD1 115 aa8.46□□□□□ -1.06
ZEB1-218ENST00000560196 A0A087WVE0 104 aa8.45□□□□□ -1.06
ZEB1-218ENST00000560196 FAM236AA0A1B0GUQ0 79 aa8.45□□□□□ -1.06
ZEB1-218ENST00000560196 FAM236BA0A1B0GV22 79 aa8.45□□□□□ -1.06
ZEB1-218ENST00000560196 J3KT08 172 aa8.45□□□□□ -1.06
ZEB1-218ENST00000560196 IGKV4-1P06312 121 aa8.45□□□□□ -1.06
ZEB1-218ENST00000560196 DSCR10P59022 87 aa8.45□□□□□ -1.06
ZEB1-218ENST00000560196 ASB16-AS1Q495Z4 193 aa8.44□□□□□ -1.06
ZEB1-218ENST00000560196 Q5XG85 94 aa8.43□□□□□ -1.06
ZEB1-218ENST00000560196 TYMSOSQ8TAI1 123 aa8.43□□□□□ -1.06
ZEB1-218ENST00000560196 Q96NJ1 140 aa8.42□□□□□ -1.06
ZEB1-218ENST00000560196 PCP4P48539 62 aa8.41□□□□□ -1.06
ZEB1-218ENST00000560196 Q5VSD8 79 aa8.4□□□□□ -1.06
ZEB1-218ENST00000560196 Q8N9L7 120 aa8.4□□□□□ -1.06
ZEB1-218ENST00000560196 A8MWP4 228 aa8.39□□□□□ -1.07
ZEB1-218ENST00000560196 ATOX1O00244 68 aa8.39□□□□□ -1.07
ZEB1-218ENST00000560196 PRR26Q8N8Z3 221 aa8.39□□□□□ -1.07
ZEB1-218ENST00000560196 FAT1Q14517 4588 aa8.39□□□□□ -1.07
ZEB1-218ENST00000560196 K7EQZ3 153 aa8.38□□□□□ -1.07
ZEB1-218ENST00000560196 DEFB116Q30KQ4 102 aa8.38□□□□□ -1.07
ZEB1-218ENST00000560196 SPAG11AQ6PDA7 123 aa8.37□□□□□ -1.07
ZEB1-218ENST00000560196 SPINK1P00995 79 aa8.36□□□□□ -1.07
ZEB1-218ENST00000560196 RPS29P62273 56 aaKnown RBP8.36□□□□□ -1.07
ZEB1-218ENST00000560196 PRR15Q8IV56 129 aa8.36□□□□□ -1.07
ZEB1-218ENST00000560196 ANAPC13Q9BS18 74 aa8.36□□□□□ -1.07
ZEB1-218ENST00000560196 LIMD2Q9BT23 127 aa8.36□□□□□ -1.07
ZEB1-218ENST00000560196 PKHD1L1Q86WI1 4243 aa8.36□□□□□ -1.07
ZEB1-218ENST00000560196 Q8N1X5 172 aa8.35□□□□□ -1.07
ZEB1-218ENST00000560196 HSPG2P98160 4391 aa8.35□□□□□ -1.07
ZEB1-218ENST00000560196 NDUFB1O75438 58 aa8.34□□□□□ -1.07
ZEB1-218ENST00000560196 LORP23490 312 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-218ENST00000560196 LINC00304Q8N9R0 145 aa8.34□□□□□ -1.07
ZEB1-218ENST00000560196 SMIM20Q8N5G0 67 aa8.31□□□□□ -1.08
ZEB1-218ENST00000560196 RYR1P21817 5038 aa8.31□□□□□ -1.08
ZEB1-218ENST00000560196 HCG22E2RYF7 251 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms