RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 FAT4Q6V0I7 4981 aa12.46□□□□□ -0.41
PSEN1-225ENST00000560005 H0Y9J4 135 aa12.46□□□□□ -0.41
PSEN1-225ENST00000560005 TEN1Q86WV5 123 aa12.45□□□□□ -0.42
PSEN1-225ENST00000560005 FAM19A1Q7Z5A9 133 aa12.44□□□□□ -0.42
PSEN1-225ENST00000560005 ETDBQ3ZM63 59 aa12.43□□□□□ -0.42
PSEN1-225ENST00000560005 BCE1O60756 84 aa12.41□□□□□ -0.42
PSEN1-225ENST00000560005 Q6ZQY7 126 aa12.41□□□□□ -0.42
PSEN1-225ENST00000560005 PPDPFLQ8WWR9 84 aa12.41□□□□□ -0.42
PSEN1-225ENST00000560005 KRTAP9-6A0A140TA67 174 aa12.39□□□□□ -0.43
PSEN1-225ENST00000560005 UBE2AP49459 152 aa12.39□□□□□ -0.43
PSEN1-225ENST00000560005 J3QR89 54 aa12.38□□□□□ -0.43
PSEN1-225ENST00000560005 A0A0U1RQV1 116 aa12.37□□□□□ -0.43
PSEN1-225ENST00000560005 Q9BRP9 147 aa12.37□□□□□ -0.43
PSEN1-225ENST00000560005 PSORS1C2Q9UIG4 136 aa12.36□□□□□ -0.43
PSEN1-225ENST00000560005 JMJD7-PLA2G4BH0Y9G9 81 aa12.35□□□□□ -0.43
PSEN1-225ENST00000560005 KRTAP11-1Q8IUC1 163 aa12.35□□□□□ -0.43
PSEN1-225ENST00000560005 PRR26Q8N8Z3 221 aa12.34□□□□□ -0.43
PSEN1-225ENST00000560005 K7ERU9 68 aa12.33□□□□□ -0.44
PSEN1-225ENST00000560005 PRLHP81277 87 aa12.32□□□□□ -0.44
PSEN1-225ENST00000560005 SMCR5Q8TEV8 140 aa12.32□□□□□ -0.44
PSEN1-225ENST00000560005 HIGD2AQ9BW72 106 aa12.31□□□□□ -0.44
PSEN1-225ENST00000560005 C1orf137Q5JT78 98 aa12.3□□□□□ -0.44
PSEN1-225ENST00000560005 LAMTOR3Q9UHA4 124 aa12.3□□□□□ -0.44
PSEN1-225ENST00000560005 IGLV5-48A0A075B6I7 105 aa12.29□□□□□ -0.44
PSEN1-225ENST00000560005 KRTAP13-1Q8IUC0 172 aa12.29□□□□□ -0.44
PSEN1-225ENST00000560005 TEX49A0A1B0GTD5 131 aa12.28□□□□□ -0.44
PSEN1-225ENST00000560005 PRR4Q16378 134 aa12.28□□□□□ -0.44
PSEN1-225ENST00000560005 C21orf62-AS1Q17RA5 79 aa12.28□□□□□ -0.44
PSEN1-225ENST00000560005 OBSCN-AS1Q96MR7 158 aa12.28□□□□□ -0.44
PSEN1-225ENST00000560005 ZNF861PO60384 105 aa12.26□□□□□ -0.45
PSEN1-225ENST00000560005 ERC2-IT1O76042 136 aa12.26□□□□□ -0.45
PSEN1-225ENST00000560005 LCE2AQ5TA79 106 aaPredicted RBP12.26□□□□□ -0.45
PSEN1-225ENST00000560005 DEFB105AQ8NG35 78 aa12.26□□□□□ -0.45
PSEN1-225ENST00000560005 NDUFV3P56181 108 aaKnown RBP12.25□□□□□ -0.45
PSEN1-225ENST00000560005 RBM3P98179 157 aaKnown RBP12.25□□□□□ -0.45
PSEN1-225ENST00000560005 ZNF706Q9Y5V0 76 aaPredicted RBP12.25□□□□□ -0.45
PSEN1-225ENST00000560005 PDE6GP18545 87 aa12.24□□□□□ -0.45
PSEN1-225ENST00000560005 Q8N377 158 aa12.24□□□□□ -0.45
PSEN1-225ENST00000560005 IGLV7-43P04211 117 aa12.23□□□□□ -0.45
PSEN1-225ENST00000560005 LINC01547P58512 204 aaPredicted RBP12.23□□□□□ -0.45
PSEN1-225ENST00000560005 ST20-AS1Q8NBB2 130 aa12.22□□□□□ -0.45
PSEN1-225ENST00000560005 SPRR1BP22528 89 aa12.2□□□□□ -0.46
PSEN1-225ENST00000560005 DSCR8Q96T75 97 aa12.2□□□□□ -0.46
PSEN1-225ENST00000560005 F8WEM9 126 aa12.18□□□□□ -0.46
PSEN1-225ENST00000560005 ACYP1P07311 99 aa12.17□□□□□ -0.46
PSEN1-225ENST00000560005 C14orf132Q9NPU4 83 aa12.17□□□□□ -0.46
PSEN1-225ENST00000560005 LOC110117498A0A087WWA1 95 aa12.16□□□□□ -0.46
PSEN1-225ENST00000560005 FAM240AA0A1B0GVK7 77 aa12.14□□□□□ -0.47
PSEN1-225ENST00000560005 KRTAP1-4P0C5Y4 121 aa12.14□□□□□ -0.47
PSEN1-225ENST00000560005 GAGE2AQ6NT46 116 aa12.14□□□□□ -0.47
PSEN1-225ENST00000560005 SPRR4Q96PI1 79 aa12.13□□□□□ -0.47
PSEN1-225ENST00000560005 CCKP06307 115 aa12.12□□□□□ -0.47
PSEN1-225ENST00000560005 TRBV7-4A0A0J9YYF1 115 aa12.11□□□□□ -0.47
PSEN1-225ENST00000560005 LINC00483Q53H64 154 aa12.1□□□□□ -0.47
PSEN1-225ENST00000560005 SMIM29Q86T20 159 aa12.1□□□□□ -0.47
PSEN1-225ENST00000560005 A0A1B0GV72 72 aa12.09□□□□□ -0.47
PSEN1-225ENST00000560005 Q6ZQT0 140 aa12.08□□□□□ -0.48
PSEN1-225ENST00000560005 IGLV8-61A0A075B6I0 122 aa12.07□□□□□ -0.48
PSEN1-225ENST00000560005 Q6JHZ5 121 aa12.07□□□□□ -0.48
PSEN1-225ENST00000560005 A0A1B0GW54 56 aa12.06□□□□□ -0.48
PSEN1-225ENST00000560005 C3orf22Q8N5N4 141 aa12.06□□□□□ -0.48
PSEN1-225ENST00000560005 MUC17Q685J3 4493 aa12.05□□□□□ -0.48
PSEN1-225ENST00000560005 VPS25Q9BRG1 176 aa12□□□□□ -0.49
PSEN1-225ENST00000560005 FAM229BQ4G0N7 80 aa11.97□□□□□ -0.49
PSEN1-225ENST00000560005 FSIP2Q5CZC0 6907 aa11.95□□□□□ -0.5
PSEN1-225ENST00000560005 Q8NBF4 154 aa11.95□□□□□ -0.5
PSEN1-225ENST00000560005 C9orf153Q5TBE3 101 aa11.94□□□□□ -0.5
PSEN1-225ENST00000560005 IGFL1Q6UW32 110 aa11.94□□□□□ -0.5
PSEN1-225ENST00000560005 UBL5Q9BZL1 73 aa11.93□□□□□ -0.5
PSEN1-225ENST00000560005 IGLV9-49A0A0B4J1Y8 123 aa11.92□□□□□ -0.5
PSEN1-225ENST00000560005 CDIP1Q9H305 208 aa11.92□□□□□ -0.5
PSEN1-225ENST00000560005 Q6Q795 121 aa11.91□□□□□ -0.5
PSEN1-225ENST00000560005 SSBP3-AS1Q7Z2R9 100 aa11.91□□□□□ -0.5
PSEN1-225ENST00000560005 A0A1W2PNM2 257 aa11.9□□□□□ -0.5
PSEN1-225ENST00000560005 CRYGAP11844 174 aa11.9□□□□□ -0.5
PSEN1-225ENST00000560005 LINC00846Q9NV44 126 aa11.9□□□□□ -0.5
PSEN1-225ENST00000560005 LINC00643Q86TS7 51 aa11.89□□□□□ -0.51
PSEN1-225ENST00000560005 A0A087X002 238 aa11.88□□□□□ -0.51
PSEN1-225ENST00000560005 MOBPQ13875 183 aa11.86□□□□□ -0.51
PSEN1-225ENST00000560005 ANAPC11Q9NYG5 84 aa11.86□□□□□ -0.51
PSEN1-225ENST00000560005 SIGMAR1Q99720 223 aa11.85□□□□□ -0.51
PSEN1-225ENST00000560005 RETNLBQ9BQ08 111 aa11.85□□□□□ -0.51
PSEN1-225ENST00000560005 TYMSOSQ8TAI1 123 aa11.84□□□□□ -0.51
PSEN1-225ENST00000560005 NREPQ16612 68 aa11.83□□□□□ -0.52
PSEN1-225ENST00000560005 TRBV7-7A0A0K0K1E9 115 aa11.82□□□□□ -0.52
PSEN1-225ENST00000560005 ATP5EP2Q5VTU8 51 aa11.82□□□□□ -0.52
PSEN1-225ENST00000560005 CD164Q04900 197 aa11.81□□□□□ -0.52
PSEN1-225ENST00000560005 Q6ZVQ6 151 aa11.79□□□□□ -0.52
PSEN1-225ENST00000560005 CRCT1Q9UGL9 99 aa11.79□□□□□ -0.52
PSEN1-225ENST00000560005 TPRXLQ17RH7 258 aa11.78□□□□□ -0.52
PSEN1-225ENST00000560005 LCE2DQ5TA82 110 aaPredicted RBP11.78□□□□□ -0.52
PSEN1-225ENST00000560005 SS18L2Q9UHA2 77 aa11.77□□□□□ -0.53
PSEN1-225ENST00000560005 A0A0G2JQZ4 141 aa11.76□□□□□ -0.53
PSEN1-225ENST00000560005 A0A087WSZ3 146 aa11.75□□□□□ -0.53
PSEN1-225ENST00000560005 IMUPQ9GZP8 106 aa11.74□□□□□ -0.53
PSEN1-225ENST00000560005 IGLV7-46A0A075B6I9 117 aa11.73□□□□□ -0.53
PSEN1-225ENST00000560005 CXCL6P80162 114 aa11.73□□□□□ -0.53
PSEN1-225ENST00000560005 KRTAP13-2Q52LG2 175 aa11.73□□□□□ -0.53
PSEN1-225ENST00000560005 MT-ATP8P03928 68 aa11.72□□□□□ -0.53
PSEN1-225ENST00000560005 C4orf48Q5BLP8 95 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms