RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 LINC00483Q53H64 154 aa7.33□□□□□ -1.24
HERC1-205ENST00000559886 SMIM29Q86T20 159 aa7.33□□□□□ -1.24
HERC1-205ENST00000559886 TEN1Q86WV5 123 aa7.33□□□□□ -1.24
HERC1-205ENST00000559886 SPINK6Q6UWN8 80 aa7.33□□□□□ -1.24
HERC1-205ENST00000559886 C3orf22Q8N5N4 141 aa7.33□□□□□ -1.24
HERC1-205ENST00000559886 LAMTOR3Q9UHA4 124 aa7.33□□□□□ -1.24
HERC1-205ENST00000559886 OBSCN-AS1Q96MR7 158 aa7.32□□□□□ -1.24
HERC1-205ENST00000559886 Q5VSD8 79 aa7.3□□□□□ -1.24
HERC1-205ENST00000559886 JMJD7-PLA2G4BH0Y9G9 81 aa7.3□□□□□ -1.24
HERC1-205ENST00000559886 KRTAP17-1Q9BYP8 105 aa7.29□□□□□ -1.24
HERC1-205ENST00000559886 A0A1B0GV72 72 aa7.28□□□□□ -1.24
HERC1-205ENST00000559886 ANAPC11Q9NYG5 84 aa7.28□□□□□ -1.24
HERC1-205ENST00000559886 PKHD1L1Q86WI1 4243 aa7.28□□□□□ -1.24
HERC1-205ENST00000559886 RBM3P98179 157 aaKnown RBP7.28□□□□□ -1.24
HERC1-205ENST00000559886 Q8N1X5 172 aa7.28□□□□□ -1.24
HERC1-205ENST00000559886 KRTAP1-4P0C5Y4 121 aa7.27□□□□□ -1.24
HERC1-205ENST00000559886 F8WEM9 126 aa7.26□□□□□ -1.25
HERC1-205ENST00000559886 IGLV8-61A0A075B6I0 122 aa7.26□□□□□ -1.25
HERC1-205ENST00000559886 C14orf132Q9NPU4 83 aa7.26□□□□□ -1.25
HERC1-205ENST00000559886 FAM229BQ4G0N7 80 aa7.25□□□□□ -1.25
HERC1-205ENST00000559886 TRBV7-4A0A0J9YYF1 115 aa7.24□□□□□ -1.25
HERC1-205ENST00000559886 DSCR8Q96T75 97 aa7.24□□□□□ -1.25
HERC1-205ENST00000559886 LOC110117498A0A087WWA1 95 aa7.23□□□□□ -1.25
HERC1-205ENST00000559886 IGLV9-49A0A0B4J1Y8 123 aa7.23□□□□□ -1.25
HERC1-205ENST00000559886 BIRC6Q9NR09 4857 aa7.23□□□□□ -1.25
HERC1-205ENST00000559886 A0A087X002 238 aa7.22□□□□□ -1.25
HERC1-205ENST00000559886 PDE6GP18545 87 aa7.22□□□□□ -1.25
HERC1-205ENST00000559886 C9orf153Q5TBE3 101 aa7.21□□□□□ -1.25
HERC1-205ENST00000559886 Q6ZQT0 140 aa7.21□□□□□ -1.25
HERC1-205ENST00000559886 CRYGAP11844 174 aa7.21□□□□□ -1.26
HERC1-205ENST00000559886 MOBPQ13875 183 aa7.21□□□□□ -1.26
HERC1-205ENST00000559886 Q6JHZ5 121 aa7.21□□□□□ -1.26
HERC1-205ENST00000559886 IGFL1Q6UW32 110 aa7.21□□□□□ -1.26
HERC1-205ENST00000559886 Q8NBF4 154 aa7.2□□□□□ -1.26
HERC1-205ENST00000559886 KRTAP13-2Q52LG2 175 aa7.2□□□□□ -1.26
HERC1-205ENST00000559886 CCKP06307 115 aa7.19□□□□□ -1.26
HERC1-205ENST00000559886 A0A0G2JQZ4 141 aa7.19□□□□□ -1.26
HERC1-205ENST00000559886 SSBP3-AS1Q7Z2R9 100 aa7.18□□□□□ -1.26
HERC1-205ENST00000559886 C21orf62-AS1Q17RA5 79 aa7.17□□□□□ -1.26
HERC1-205ENST00000559886 A0A1W2PNM2 257 aa7.17□□□□□ -1.26
HERC1-205ENST00000559886 J3QR89 54 aa7.16□□□□□ -1.26
HERC1-205ENST00000559886 PRR26Q8N8Z3 221 aa7.16□□□□□ -1.26
HERC1-205ENST00000559886 VPS25Q9BRG1 176 aa7.16□□□□□ -1.26
HERC1-205ENST00000559886 K7ERU9 68 aa7.14□□□□□ -1.27
HERC1-205ENST00000559886 KRTAP4-5Q9BYR2 181 aa7.14□□□□□ -1.27
HERC1-205ENST00000559886 Q6Q795 121 aa7.13□□□□□ -1.27
HERC1-205ENST00000559886 TYMSOSQ8TAI1 123 aa7.13□□□□□ -1.27
HERC1-205ENST00000559886 FAM240AA0A1B0GVK7 77 aa7.13□□□□□ -1.27
HERC1-205ENST00000559886 FLG2Q5D862 2391 aaPredicted RBP7.12□□□□□ -1.27
HERC1-205ENST00000559886 A0A1B0GW54 56 aa7.11□□□□□ -1.27
HERC1-205ENST00000559886 ACYP1P07311 99 aa7.11□□□□□ -1.27
HERC1-205ENST00000559886 HERC2O95714 4834 aa7.11□□□□□ -1.27
HERC1-205ENST00000559886 LRP1Q07954 4544 aaKnown RBP7.11□□□□□ -1.27
HERC1-205ENST00000559886 CD164Q04900 197 aa7.1□□□□□ -1.27
HERC1-205ENST00000559886 FAT3Q8TDW7 4589 aa7.1□□□□□ -1.27
HERC1-205ENST00000559886 TRBV7-7A0A0K0K1E9 115 aa7.09□□□□□ -1.27
HERC1-205ENST00000559886 HRCT1Q6UXD1 115 aa7.09□□□□□ -1.27
HERC1-205ENST00000559886 LINC00846Q9NV44 126 aa7.09□□□□□ -1.27
HERC1-205ENST00000559886 TNXBP22105 4242 aa7.08□□□□□ -1.28
HERC1-205ENST00000559886 A0A087WSZ3 146 aa7.07□□□□□ -1.28
HERC1-205ENST00000559886 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
HERC1-205ENST00000559886 MYCBP2O75592 4640 aa7.06□□□□□ -1.28
HERC1-205ENST00000559886 LINC00304Q8N9R0 145 aa7.06□□□□□ -1.28
HERC1-205ENST00000559886 C4orf48Q5BLP8 95 aa7.05□□□□□ -1.28
HERC1-205ENST00000559886 SPAG11AQ6PDA7 123 aa7.04□□□□□ -1.28
HERC1-205ENST00000559886 SPINK1P00995 79 aa7.04□□□□□ -1.28
HERC1-205ENST00000559886 OXTP01178 125 aa7.03□□□□□ -1.28
HERC1-205ENST00000559886 UBL5Q9BZL1 73 aa7.03□□□□□ -1.28
HERC1-205ENST00000559886 CDIP1Q9H305 208 aa7.03□□□□□ -1.28
HERC1-205ENST00000559886 Q6ZVQ6 151 aa7.03□□□□□ -1.28
HERC1-205ENST00000559886 NREPQ16612 68 aa7.02□□□□□ -1.29
HERC1-205ENST00000559886 SS18L2Q9UHA2 77 aa7.02□□□□□ -1.29
HERC1-205ENST00000559886 MT1HL1P0DM35 61 aa7.02□□□□□ -1.29
HERC1-205ENST00000559886 Q5XG85 94 aa7.01□□□□□ -1.29
HERC1-205ENST00000559886 ABCA13Q86UQ4 5058 aa7.01□□□□□ -1.29
HERC1-205ENST00000559886 RPS29P62273 56 aaKnown RBP7.01□□□□□ -1.29
HERC1-205ENST00000559886 LIMD2Q9BT23 127 aa6.99□□□□□ -1.29
HERC1-205ENST00000559886 KRTAP29-1A8MX34 341 aaPredicted RBP6.99□□□□□ -1.29
HERC1-205ENST00000559886 ASB16-AS1Q495Z4 193 aa6.99□□□□□ -1.29
HERC1-205ENST00000559886 LINC00643Q86TS7 51 aa6.98□□□□□ -1.29
HERC1-205ENST00000559886 LINC00472Q9H8W2 130 aa6.98□□□□□ -1.29
HERC1-205ENST00000559886 Q96NJ1 140 aa6.97□□□□□ -1.29
HERC1-205ENST00000559886 DMBT1Q9UGM3 2413 aaPredicted RBP6.96□□□□□ -1.29
HERC1-205ENST00000559886 DEFB116Q30KQ4 102 aa6.94□□□□□ -1.3
HERC1-205ENST00000559886 BPY2O14599 106 aa6.94□□□□□ -1.3
HERC1-205ENST00000559886 CXCL6P80162 114 aa6.93□□□□□ -1.3
HERC1-205ENST00000559886 C1orf195Q5TG92 126 aa6.93□□□□□ -1.3
HERC1-205ENST00000559886 ATP5EP2Q5VTU8 51 aa6.93□□□□□ -1.3
HERC1-205ENST00000559886 SIGMAR1Q99720 223 aa6.93□□□□□ -1.3
HERC1-205ENST00000559886 IGKV3D-7A0A0C4DH55 119 aa6.91□□□□□ -1.3
HERC1-205ENST00000559886 J3KT08 172 aa6.91□□□□□ -1.3
HERC1-205ENST00000559886 IGKV4-1P06312 121 aa6.91□□□□□ -1.3
HERC1-205ENST00000559886 DSCR10P59022 87 aa6.9□□□□□ -1.3
HERC1-205ENST00000559886 MT-ATP8P03928 68 aa6.9□□□□□ -1.31
HERC1-205ENST00000559886 A8MWP4 228 aa6.87□□□□□ -1.31
HERC1-205ENST00000559886 J3QL48 77 aa6.87□□□□□ -1.31
HERC1-205ENST00000559886 Q8N9L7 120 aa6.86□□□□□ -1.31
HERC1-205ENST00000559886 K7EQZ3 153 aa6.86□□□□□ -1.31
HERC1-205ENST00000559886 PCLOQ9Y6V0 5065 aa6.85□□□□□ -1.31
HERC1-205ENST00000559886 RETNLBQ9BQ08 111 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms