RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 C3orf22Q8N5N4 141 aa6.25□□□□□ -1.41
TPM1-221ENST00000559831 H3BQ85 93 aa6.24□□□□□ -1.41
TPM1-221ENST00000559831 TMEM256-PLSCR3K7ERE1 68 aa6.24□□□□□ -1.41
TPM1-221ENST00000559831 SPRR1BP22528 89 aa6.24□□□□□ -1.41
TPM1-221ENST00000559831 LINC00483Q53H64 154 aa6.24□□□□□ -1.41
TPM1-221ENST00000559831 A0A1B0GV72 72 aa6.23□□□□□ -1.41
TPM1-221ENST00000559831 KRTAP1-4P0C5Y4 121 aa6.23□□□□□ -1.41
TPM1-221ENST00000559831 UBE2V1Q13404 147 aa6.23□□□□□ -1.41
TPM1-221ENST00000559831 PPDPFLQ8WWR9 84 aa6.23□□□□□ -1.41
TPM1-221ENST00000559831 KRTAP4-5Q9BYR2 181 aa6.23□□□□□ -1.41
TPM1-221ENST00000559831 LAMTOR3Q9UHA4 124 aa6.23□□□□□ -1.41
TPM1-221ENST00000559831 IGLV9-49A0A0B4J1Y8 123 aa6.22□□□□□ -1.41
TPM1-221ENST00000559831 F8WEM9 126 aa6.22□□□□□ -1.41
TPM1-221ENST00000559831 H3BT86 120 aa6.22□□□□□ -1.41
TPM1-221ENST00000559831 SMIM29Q86T20 159 aa6.22□□□□□ -1.41
TPM1-221ENST00000559831 ANKRD29Q8N6D5 301 aa6.22□□□□□ -1.41
TPM1-221ENST00000559831 PRO0461Q9UI25 63 aa6.22□□□□□ -1.41
TPM1-221ENST00000559831 PKHD1L1Q86WI1 4243 aa6.22□□□□□ -1.41
TPM1-221ENST00000559831 SRRM2Q9UQ35 2752 aaKnown RBP6.21□□□□□ -1.42
TPM1-221ENST00000559831 NDUFV3P56181 108 aaKnown RBP6.21□□□□□ -1.42
TPM1-221ENST00000559831 C9orf153Q5TBE3 101 aa6.21□□□□□ -1.42
TPM1-221ENST00000559831 A0A087X002 238 aa6.2□□□□□ -1.42
TPM1-221ENST00000559831 CRYGAP11844 174 aa6.2□□□□□ -1.42
TPM1-221ENST00000559831 FAM229BQ4G0N7 80 aa6.2□□□□□ -1.42
TPM1-221ENST00000559831 MOBPQ13875 183 aa6.19□□□□□ -1.42
TPM1-221ENST00000559831 PRR26Q8N8Z3 221 aa6.19□□□□□ -1.42
TPM1-221ENST00000559831 F8W1H4 67 aa6.18□□□□□ -1.42
TPM1-221ENST00000559831 KRTAP13-2Q52LG2 175 aa6.17□□□□□ -1.42
TPM1-221ENST00000559831 Q8NBF4 154 aa6.17□□□□□ -1.42
TPM1-221ENST00000559831 FLG2Q5D862 2391 aaPredicted RBP6.16□□□□□ -1.42
TPM1-221ENST00000559831 RBM3P98179 157 aaKnown RBP6.15□□□□□ -1.42
TPM1-221ENST00000559831 TYMSOSQ8TAI1 123 aa6.15□□□□□ -1.42
TPM1-221ENST00000559831 LINC01600Q96MT4 127 aa6.15□□□□□ -1.42
TPM1-221ENST00000559831 A0A0G2JQZ4 141 aa6.14□□□□□ -1.43
TPM1-221ENST00000559831 JMJD7-PLA2G4BH0Y9G9 81 aa6.14□□□□□ -1.43
TPM1-221ENST00000559831 IGLV8-61A0A075B6I0 122 aa6.13□□□□□ -1.43
TPM1-221ENST00000559831 ETDBQ3ZM63 59 aa6.13□□□□□ -1.43
TPM1-221ENST00000559831 Q6JHZ5 121 aa6.13□□□□□ -1.43
TPM1-221ENST00000559831 IGFL1Q6UW32 110 aa6.13□□□□□ -1.43
TPM1-221ENST00000559831 TEN1Q86WV5 123 aa6.13□□□□□ -1.43
TPM1-221ENST00000559831 DSCR8Q96T75 97 aa6.13□□□□□ -1.43
TPM1-221ENST00000559831 C14orf132Q9NPU4 83 aa6.13□□□□□ -1.43
TPM1-221ENST00000559831 SSBP3-AS1Q7Z2R9 100 aa6.12□□□□□ -1.43
TPM1-221ENST00000559831 OBSCN-AS1Q96MR7 158 aa6.12□□□□□ -1.43
TPM1-221ENST00000559831 PCLOQ9Y6V0 5065 aa6.12□□□□□ -1.43
TPM1-221ENST00000559831 HRCT1Q6UXD1 115 aa6.11□□□□□ -1.43
TPM1-221ENST00000559831 VPS25Q9BRG1 176 aa6.11□□□□□ -1.43
TPM1-221ENST00000559831 TRBV7-4A0A0J9YYF1 115 aa6.1□□□□□ -1.43
TPM1-221ENST00000559831 OXTP01178 125 aa6.1□□□□□ -1.43
TPM1-221ENST00000559831 LINC00304Q8N9R0 145 aa6.09□□□□□ -1.43
TPM1-221ENST00000559831 LOC110117498A0A087WWA1 95 aa6.08□□□□□ -1.44
TPM1-221ENST00000559831 CCKP06307 115 aa6.08□□□□□ -1.44
TPM1-221ENST00000559831 KRTAP10-8P60410 259 aa6.08□□□□□ -1.44
TPM1-221ENST00000559831 Q6ZQT0 140 aa6.08□□□□□ -1.44
TPM1-221ENST00000559831 A0A1W2PNM2 257 aa6.07□□□□□ -1.44
TPM1-221ENST00000559831 PDE6GP18545 87 aa6.07□□□□□ -1.44
TPM1-221ENST00000559831 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
TPM1-221ENST00000559831 FAT3Q8TDW7 4589 aa6.06□□□□□ -1.44
TPM1-221ENST00000559831 KRTAP29-1A8MX34 341 aaPredicted RBP6.06□□□□□ -1.44
TPM1-221ENST00000559831 MT1HL1P0DM35 61 aa6.06□□□□□ -1.44
TPM1-221ENST00000559831 ABCA13Q86UQ4 5058 aa6.05□□□□□ -1.44
TPM1-221ENST00000559831 TRBV7-7A0A0K0K1E9 115 aa6.04□□□□□ -1.44
TPM1-221ENST00000559831 CD164Q04900 197 aa6.04□□□□□ -1.44
TPM1-221ENST00000559831 SPAG11AQ6PDA7 123 aa6.04□□□□□ -1.44
TPM1-221ENST00000559831 C21orf62-AS1Q17RA5 79 aa6.03□□□□□ -1.44
TPM1-221ENST00000559831 Q6Q795 121 aa6.03□□□□□ -1.44
TPM1-221ENST00000559831 A0A087WSZ3 146 aa6.02□□□□□ -1.45
TPM1-221ENST00000559831 SPINK1P00995 79 aa6.01□□□□□ -1.45
TPM1-221ENST00000559831 TNXBP22105 4242 aa6.01□□□□□ -1.45
TPM1-221ENST00000559831 LIMD2Q9BT23 127 aa6□□□□□ -1.45
TPM1-221ENST00000559831 MYCBP2O75592 4640 aa6□□□□□ -1.45
TPM1-221ENST00000559831 SS18L2Q9UHA2 77 aa5.98□□□□□ -1.45
TPM1-221ENST00000559831 DMBT1Q9UGM3 2413 aaPredicted RBP5.97□□□□□ -1.45
TPM1-221ENST00000559831 A0A1B0GW54 56 aa5.97□□□□□ -1.45
TPM1-221ENST00000559831 J3QR89 54 aa5.97□□□□□ -1.45
TPM1-221ENST00000559831 RPS29P62273 56 aaKnown RBP5.97□□□□□ -1.45
TPM1-221ENST00000559831 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
TPM1-221ENST00000559831 RETNLBQ9BQ08 111 aa5.95□□□□□ -1.46
TPM1-221ENST00000559831 LINC00846Q9NV44 126 aa5.95□□□□□ -1.46
TPM1-221ENST00000559831 ACYP1P07311 99 aa5.94□□□□□ -1.46
TPM1-221ENST00000559831 NREPQ16612 68 aa5.94□□□□□ -1.46
TPM1-221ENST00000559831 Q5XG85 94 aa5.94□□□□□ -1.46
TPM1-221ENST00000559831 FAM240AA0A1B0GVK7 77 aa5.93□□□□□ -1.46
TPM1-221ENST00000559831 K7ERU9 68 aa5.93□□□□□ -1.46
TPM1-221ENST00000559831 UBL5Q9BZL1 73 aa5.93□□□□□ -1.46
TPM1-221ENST00000559831 DEFB116Q30KQ4 102 aa5.92□□□□□ -1.46
TPM1-221ENST00000559831 ASB16-AS1Q495Z4 193 aa5.92□□□□□ -1.46
TPM1-221ENST00000559831 C1orf195Q5TG92 126 aa5.92□□□□□ -1.46
TPM1-221ENST00000559831 Q6ZVQ6 151 aa5.92□□□□□ -1.46
TPM1-221ENST00000559831 Q96NJ1 140 aa5.91□□□□□ -1.46
TPM1-221ENST00000559831 SIGMAR1Q99720 223 aa5.9□□□□□ -1.46
TPM1-221ENST00000559831 LINC00472Q9H8W2 130 aa5.9□□□□□ -1.46
TPM1-221ENST00000559831 IGKV4-1P06312 121 aa5.89□□□□□ -1.47
TPM1-221ENST00000559831 BPY2O14599 106 aa5.87□□□□□ -1.47
TPM1-221ENST00000559831 PRR4Q16378 134 aa5.87□□□□□ -1.47
TPM1-221ENST00000559831 J3KT08 172 aa5.86□□□□□ -1.47
TPM1-221ENST00000559831 LCE2AQ5TA79 106 aaPredicted RBP5.86□□□□□ -1.47
TPM1-221ENST00000559831 HERC1Q15751 4861 aa5.85□□□□□ -1.47
TPM1-221ENST00000559831 IGKV3D-7A0A0C4DH55 119 aa5.84□□□□□ -1.47
TPM1-221ENST00000559831 FP248Q71RG6 208 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms