RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 NDUFV3P56181 108 aaKnown RBP10.42□□□□□ -0.74
CHRNA3-206ENST00000559658 CDK2AP2O75956 126 aa10.42□□□□□ -0.74
CHRNA3-206ENST00000559658 A0A0G2JQZ4 141 aa10.39□□□□□ -0.75
CHRNA3-206ENST00000559658 SPRR1BP22528 89 aa10.39□□□□□ -0.75
CHRNA3-206ENST00000559658 PPDPFLQ8WWR9 84 aa10.39□□□□□ -0.75
CHRNA3-206ENST00000559658 LINC00483Q53H64 154 aa10.37□□□□□ -0.75
CHRNA3-206ENST00000559658 H3BQ85 93 aa10.36□□□□□ -0.75
CHRNA3-206ENST00000559658 GHRHP01286 108 aa10.35□□□□□ -0.75
CHRNA3-206ENST00000559658 RBM3P98179 157 aaKnown RBP10.34□□□□□ -0.75
CHRNA3-206ENST00000559658 JMJD7-PLA2G4BH0Y9G9 81 aa10.34□□□□□ -0.75
CHRNA3-206ENST00000559658 ZNF706Q9Y5V0 76 aaPredicted RBP10.34□□□□□ -0.75
CHRNA3-206ENST00000559658 IGLV9-49A0A0B4J1Y8 123 aa10.33□□□□□ -0.76
CHRNA3-206ENST00000559658 KRTAP1-4P0C5Y4 121 aa10.33□□□□□ -0.76
CHRNA3-206ENST00000559658 Q5VSD8 79 aa10.33□□□□□ -0.76
CHRNA3-206ENST00000559658 TRBV7-4A0A0J9YYF1 115 aa10.32□□□□□ -0.76
CHRNA3-206ENST00000559658 A0A087X002 238 aa10.31□□□□□ -0.76
CHRNA3-206ENST00000559658 Q6ZQT0 140 aa10.3□□□□□ -0.76
CHRNA3-206ENST00000559658 PKHD1L1Q86WI1 4243 aa10.29□□□□□ -0.76
CHRNA3-206ENST00000559658 F8WEM9 126 aa10.28□□□□□ -0.76
CHRNA3-206ENST00000559658 SPINK6Q6UWN8 80 aa10.28□□□□□ -0.76
CHRNA3-206ENST00000559658 DSCR8Q96T75 97 aa10.28□□□□□ -0.76
CHRNA3-206ENST00000559658 LOC110117498A0A087WWA1 95 aa10.27□□□□□ -0.76
CHRNA3-206ENST00000559658 IGFL1Q6UW32 110 aa10.27□□□□□ -0.76
CHRNA3-206ENST00000559658 FAM229AH3BQW9 127 aa10.27□□□□□ -0.77
CHRNA3-206ENST00000559658 MOBPQ13875 183 aa10.27□□□□□ -0.77
CHRNA3-206ENST00000559658 C9orf153Q5TBE3 101 aa10.27□□□□□ -0.77
CHRNA3-206ENST00000559658 IGLV8-61A0A075B6I0 122 aa10.26□□□□□ -0.77
CHRNA3-206ENST00000559658 VPS25Q9BRG1 176 aa10.26□□□□□ -0.77
CHRNA3-206ENST00000559658 KRTAP13-2Q52LG2 175 aa10.25□□□□□ -0.77
CHRNA3-206ENST00000559658 BIRC6Q9NR09 4857 aa10.25□□□□□ -0.77
CHRNA3-206ENST00000559658 A0A1W2PNM2 257 aa10.25□□□□□ -0.77
CHRNA3-206ENST00000559658 PLA2G1BP04054 148 aaKnown RBP10.25□□□□□ -0.77
CHRNA3-206ENST00000559658 CCKP06307 115 aa10.24□□□□□ -0.77
CHRNA3-206ENST00000559658 K7ERU9 68 aa10.22□□□□□ -0.77
CHRNA3-206ENST00000559658 Q8N1X5 172 aa10.21□□□□□ -0.77
CHRNA3-206ENST00000559658 LRP1Q07954 4544 aaKnown RBP10.21□□□□□ -0.78
CHRNA3-206ENST00000559658 Q8NBF4 154 aa10.19□□□□□ -0.78
CHRNA3-206ENST00000559658 J3QR89 54 aa10.18□□□□□ -0.78
CHRNA3-206ENST00000559658 FAM229BQ4G0N7 80 aa10.18□□□□□ -0.78
CHRNA3-206ENST00000559658 PRR26Q8N8Z3 221 aa10.18□□□□□ -0.78
CHRNA3-206ENST00000559658 KRTAP4-5Q9BYR2 181 aa10.18□□□□□ -0.78
CHRNA3-206ENST00000559658 LINC00846Q9NV44 126 aa10.17□□□□□ -0.78
CHRNA3-206ENST00000559658 HRCT1Q6UXD1 115 aa10.17□□□□□ -0.78
CHRNA3-206ENST00000559658 CRYGAP11844 174 aa10.16□□□□□ -0.78
CHRNA3-206ENST00000559658 PDE6GP18545 87 aa10.16□□□□□ -0.78
CHRNA3-206ENST00000559658 Q6JHZ5 121 aa10.15□□□□□ -0.78
CHRNA3-206ENST00000559658 CDIP1Q9H305 208 aa10.15□□□□□ -0.78
CHRNA3-206ENST00000559658 FLG2Q5D862 2391 aaPredicted RBP10.15□□□□□ -0.78
CHRNA3-206ENST00000559658 FAM240AA0A1B0GVK7 77 aa10.15□□□□□ -0.79
CHRNA3-206ENST00000559658 MYCBP2O75592 4640 aa10.15□□□□□ -0.79
CHRNA3-206ENST00000559658 HERC2O95714 4834 aa10.11□□□□□ -0.79
CHRNA3-206ENST00000559658 A0A087WSZ3 146 aa10.1□□□□□ -0.79
CHRNA3-206ENST00000559658 FAT3Q8TDW7 4589 aa10.1□□□□□ -0.79
CHRNA3-206ENST00000559658 ABCA13Q86UQ4 5058 aa10.09□□□□□ -0.79
CHRNA3-206ENST00000559658 TYMSOSQ8TAI1 123 aa10.08□□□□□ -0.8
CHRNA3-206ENST00000559658 ACYP1P07311 99 aa10.08□□□□□ -0.8
CHRNA3-206ENST00000559658 Q6Q795 121 aa10.07□□□□□ -0.8
CHRNA3-206ENST00000559658 SSBP3-AS1Q7Z2R9 100 aa10.07□□□□□ -0.8
CHRNA3-206ENST00000559658 TRBV7-7A0A0K0K1E9 115 aa10.06□□□□□ -0.8
CHRNA3-206ENST00000559658 TNXBP22105 4242 aa10.05□□□□□ -0.8
CHRNA3-206ENST00000559658 Q6ZVQ6 151 aa10.05□□□□□ -0.8
CHRNA3-206ENST00000559658 C21orf62-AS1Q17RA5 79 aa10□□□□□ -0.81
CHRNA3-206ENST00000559658 DEFB116Q30KQ4 102 aa10□□□□□ -0.81
CHRNA3-206ENST00000559658 UBL5Q9BZL1 73 aa10□□□□□ -0.81
CHRNA3-206ENST00000559658 MT-ATP8P03928 68 aa9.99□□□□□ -0.81
CHRNA3-206ENST00000559658 NREPQ16612 68 aa9.98□□□□□ -0.81
CHRNA3-206ENST00000559658 IGKV3D-7A0A0C4DH55 119 aa9.97□□□□□ -0.81
CHRNA3-206ENST00000559658 A0A1B0GW54 56 aa9.97□□□□□ -0.81
CHRNA3-206ENST00000559658 CD164Q04900 197 aa9.97□□□□□ -0.81
CHRNA3-206ENST00000559658 LINC00304Q8N9R0 145 aa9.97□□□□□ -0.81
CHRNA3-206ENST00000559658 KRTAP10-8P60410 259 aa9.96□□□□□ -0.82
CHRNA3-206ENST00000559658 Q96NJ1 140 aa9.96□□□□□ -0.82
CHRNA3-206ENST00000559658 LINC00643Q86TS7 51 aa9.95□□□□□ -0.82
CHRNA3-206ENST00000559658 MT1HL1P0DM35 61 aa9.93□□□□□ -0.82
CHRNA3-206ENST00000559658 LINC00472Q9H8W2 130 aa9.92□□□□□ -0.82
CHRNA3-206ENST00000559658 Q8N9L7 120 aa9.91□□□□□ -0.82
CHRNA3-206ENST00000559658 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
CHRNA3-206ENST00000559658 BPY2O14599 106 aa9.88□□□□□ -0.83
CHRNA3-206ENST00000559658 SPINK1P00995 79 aa9.88□□□□□ -0.83
CHRNA3-206ENST00000559658 SS18L2Q9UHA2 77 aa9.88□□□□□ -0.83
CHRNA3-206ENST00000559658 DSCR10P59022 87 aa9.87□□□□□ -0.83
CHRNA3-206ENST00000559658 SIGMAR1Q99720 223 aa9.85□□□□□ -0.83
CHRNA3-206ENST00000559658 Q5XG85 94 aa9.85□□□□□ -0.83
CHRNA3-206ENST00000559658 A0A087WVE0 104 aa9.84□□□□□ -0.83
CHRNA3-206ENST00000559658 C1orf195Q5TG92 126 aa9.84□□□□□ -0.83
CHRNA3-206ENST00000559658 PCLOQ9Y6V0 5065 aa9.84□□□□□ -0.83
CHRNA3-206ENST00000559658 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
CHRNA3-206ENST00000559658 K7EQZ3 153 aa9.83□□□□□ -0.84
CHRNA3-206ENST00000559658 CXCL6P80162 114 aa9.83□□□□□ -0.84
CHRNA3-206ENST00000559658 ATP5EP2Q5VTU8 51 aa9.83□□□□□ -0.84
CHRNA3-206ENST00000559658 SPAG11AQ6PDA7 123 aa9.83□□□□□ -0.84
CHRNA3-206ENST00000559658 IGKV4-1P06312 121 aa9.83□□□□□ -0.84
CHRNA3-206ENST00000559658 LIMD2Q9BT23 127 aa9.83□□□□□ -0.84
CHRNA3-206ENST00000559658 ASB16-AS1Q495Z4 193 aa9.82□□□□□ -0.84
CHRNA3-206ENST00000559658 RETNLBQ9BQ08 111 aa9.82□□□□□ -0.84
CHRNA3-206ENST00000559658 HIST1H4AP62805 103 aaKnown RBP9.81□□□□□ -0.84
CHRNA3-206ENST00000559658 RPS29P62273 56 aaKnown RBP9.8□□□□□ -0.84
CHRNA3-206ENST00000559658 OXTP01178 125 aa9.79□□□□□ -0.84
CHRNA3-206ENST00000559658 KRTAP29-1A8MX34 341 aaPredicted RBP9.76□□□□□ -0.85
CHRNA3-206ENST00000559658 A8MWP4 228 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms