RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 C3orf22Q8N5N4 141 aa4.88□□□□□ -1.63
LRRC28-211ENST00000558890 PCLOQ9Y6V0 5065 aa4.88□□□□□ -1.63
LRRC28-211ENST00000558890 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.87□□□□□ -1.63
LRRC28-211ENST00000558890 EPM2AB3EWF7 344 aa4.87□□□□□ -1.63
LRRC28-211ENST00000558890 COX7CP15954 63 aa4.87□□□□□ -1.63
LRRC28-211ENST00000558890 KRTAP10-1P60331 282 aa4.87□□□□□ -1.63
LRRC28-211ENST00000558890 Q6ZRX8 168 aa4.87□□□□□ -1.63
LRRC28-211ENST00000558890 MRPL55Q7Z7F7 128 aaKnown RBP4.87□□□□□ -1.63
LRRC28-211ENST00000558890 IGLV1-50A0A075B6I6 118 aa4.86□□□□□ -1.63
LRRC28-211ENST00000558890 A0A087WVE0 104 aa4.86□□□□□ -1.63
LRRC28-211ENST00000558890 RPL37AP8A6NKH3 93 aa4.86□□□□□ -1.63
LRRC28-211ENST00000558890 SPRR1AP35321 89 aa4.86□□□□□ -1.63
LRRC28-211ENST00000558890 HAMPP81172 84 aa4.86□□□□□ -1.63
LRRC28-211ENST00000558890 Q6ZVQ6 151 aa4.86□□□□□ -1.63
LRRC28-211ENST00000558890 FAM168BA1KXE4 195 aa4.85□□□□□ -1.63
LRRC28-211ENST00000558890 UBE2BP63146 152 aa4.85□□□□□ -1.63
LRRC28-211ENST00000558890 CXCL6P80162 114 aa4.85□□□□□ -1.63
LRRC28-211ENST00000558890 DEFB105AQ8NG35 78 aa4.85□□□□□ -1.63
LRRC28-211ENST00000558890 CDK2AP2O75956 126 aa4.84□□□□□ -1.63
LRRC28-211ENST00000558890 LINC01547P58512 204 aaPredicted RBP4.84□□□□□ -1.63
LRRC28-211ENST00000558890 REG3GQ6UW15 175 aa4.84□□□□□ -1.63
LRRC28-211ENST00000558890 SERP2Q8N6R1 65 aa4.84□□□□□ -1.63
LRRC28-211ENST00000558890 SPACA4Q8TDM5 124 aa4.84□□□□□ -1.63
LRRC28-211ENST00000558890 FAM30AQ9NZY2 134 aa4.84□□□□□ -1.63
LRRC28-211ENST00000558890 SS18L2Q9UHA2 77 aa4.84□□□□□ -1.63
LRRC28-211ENST00000558890 KRTAP4-16G5E9R7 235 aaPredicted RBP4.83□□□□□ -1.64
LRRC28-211ENST00000558890 BCE1O60756 84 aa4.83□□□□□ -1.64
LRRC28-211ENST00000558890 FAM19A1Q7Z5A9 133 aa4.83□□□□□ -1.64
LRRC28-211ENST00000558890 KRTAP4-5Q9BYR2 181 aa4.83□□□□□ -1.64
LRRC28-211ENST00000558890 PLAC8Q9NZF1 115 aa4.83□□□□□ -1.64
LRRC28-211ENST00000558890 SRRM2Q9UQ35 2752 aaKnown RBP4.83□□□□□ -1.64
LRRC28-211ENST00000558890 IGLV5-48A0A075B6I7 105 aa4.82□□□□□ -1.64
LRRC28-211ENST00000558890 A0A096LNI7 61 aa4.82□□□□□ -1.64
LRRC28-211ENST00000558890 IGKV2-24A0A0C4DH68 120 aa4.82□□□□□ -1.64
LRRC28-211ENST00000558890 A0A1B0GW54 56 aa4.82□□□□□ -1.64
LRRC28-211ENST00000558890 F8WEM9 126 aa4.82□□□□□ -1.64
LRRC28-211ENST00000558890 Q8N377 158 aa4.82□□□□□ -1.64
LRRC28-211ENST00000558890 SMIM20Q8N5G0 67 aa4.82□□□□□ -1.64
LRRC28-211ENST00000558890 PKHD1L1Q86WI1 4243 aa4.82□□□□□ -1.64
LRRC28-211ENST00000558890 CRYGAP11844 174 aa4.81□□□□□ -1.64
LRRC28-211ENST00000558890 KRTAP7-1Q8IUC3 87 aa4.81□□□□□ -1.64
LRRC28-211ENST00000558890 Q9BRP9 147 aa4.81□□□□□ -1.64
LRRC28-211ENST00000558890 NREPQ16612 68 aa4.8□□□□□ -1.64
LRRC28-211ENST00000558890 MYCBP2O75592 4640 aa4.79□□□□□ -1.64
LRRC28-211ENST00000558890 C1orf137Q5JT78 98 aa4.79□□□□□ -1.64
LRRC28-211ENST00000558890 SCXQ7RTU7 201 aa4.79□□□□□ -1.64
LRRC28-211ENST00000558890 ST20-AS1Q8NBB2 130 aa4.79□□□□□ -1.64
LRRC28-211ENST00000558890 TRAV7A0A075B6U4 112 aa4.78□□□□□ -1.64
LRRC28-211ENST00000558890 Q8NBF4 154 aa4.78□□□□□ -1.64
LRRC28-211ENST00000558890 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-211ENST00000558890 FLG2Q5D862 2391 aaPredicted RBP4.78□□□□□ -1.64
LRRC28-211ENST00000558890 A0A1W2PNN7 141 aa4.77□□□□□ -1.65
LRRC28-211ENST00000558890 PANO1I0J062 215 aa4.77□□□□□ -1.65
LRRC28-211ENST00000558890 BPY2O14599 106 aa4.77□□□□□ -1.65
LRRC28-211ENST00000558890 ERC2-IT1O76042 136 aa4.77□□□□□ -1.65
LRRC28-211ENST00000558890 XP32Q5T750 250 aa4.77□□□□□ -1.65
LRRC28-211ENST00000558890 Q8N1X5 172 aa4.77□□□□□ -1.65
LRRC28-211ENST00000558890 FAT3Q8TDW7 4589 aa4.76□□□□□ -1.65
LRRC28-211ENST00000558890 LRP1Q07954 4544 aaKnown RBP4.76□□□□□ -1.65
LRRC28-211ENST00000558890 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
LRRC28-211ENST00000558890 TMEM258P61165 79 aa4.76□□□□□ -1.65
LRRC28-211ENST00000558890 PRLHP81277 87 aa4.76□□□□□ -1.65
LRRC28-211ENST00000558890 CIRBP-AS1Q8TBR5 109 aa4.76□□□□□ -1.65
LRRC28-211ENST00000558890 HIGD2AQ9BW72 106 aa4.76□□□□□ -1.65
LRRC28-211ENST00000558890 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
LRRC28-211ENST00000558890 A0A1W2PNM2 257 aa4.75□□□□□ -1.65
LRRC28-211ENST00000558890 CHTF8P0CG12 524 aa4.75□□□□□ -1.65
LRRC28-211ENST00000558890 UBE2AP49459 152 aa4.75□□□□□ -1.65
LRRC28-211ENST00000558890 KRTAP10-4P60372 401 aaPredicted RBP4.75□□□□□ -1.65
LRRC28-211ENST00000558890 PHF5AQ7RTV0 110 aaKnown RBP4.75□□□□□ -1.65
LRRC28-211ENST00000558890 H0Y9J4 135 aa4.74□□□□□ -1.65
LRRC28-211ENST00000558890 SPRR4Q96PI1 79 aa4.74□□□□□ -1.65
LRRC28-211ENST00000558890 SMR3BP02814 79 aaPredicted RBP4.73□□□□□ -1.65
LRRC28-211ENST00000558890 IGKV4-1P06312 121 aa4.73□□□□□ -1.65
LRRC28-211ENST00000558890 DPH3Q96FX2 82 aa4.73□□□□□ -1.65
LRRC28-211ENST00000558890 IGLV8-61A0A075B6I0 122 aa4.72□□□□□ -1.65
LRRC28-211ENST00000558890 SMIM29Q86T20 159 aa4.72□□□□□ -1.65
LRRC28-211ENST00000558890 C20orf197Q8N268 126 aa4.72□□□□□ -1.65
LRRC28-211ENST00000558890 HERC1Q15751 4861 aa4.72□□□□□ -1.65
LRRC28-211ENST00000558890 TNXBP22105 4242 aa4.71□□□□□ -1.66
LRRC28-211ENST00000558890 J3KT08 172 aa4.71□□□□□ -1.66
LRRC28-211ENST00000558890 SPRR1BP22528 89 aa4.71□□□□□ -1.66
LRRC28-211ENST00000558890 IGFL1Q6UW32 110 aa4.71□□□□□ -1.66
LRRC28-211ENST00000558890 Q8N9L7 120 aa4.71□□□□□ -1.66
LRRC28-211ENST00000558890 NDUFC1O43677 76 aa4.69□□□□□ -1.66
LRRC28-211ENST00000558890 PLA2G1BP04054 148 aaKnown RBP4.69□□□□□ -1.66
LRRC28-211ENST00000558890 FAM236DA0A1B0GTK5 79 aa4.68□□□□□ -1.66
LRRC28-211ENST00000558890 FAM236CP0DP71 79 aa4.68□□□□□ -1.66
LRRC28-211ENST00000558890 KLKP1Q107X0 134 aa4.68□□□□□ -1.66
LRRC28-211ENST00000558890 Q5VSD8 79 aa4.68□□□□□ -1.66
LRRC28-211ENST00000558890 CYSTM1Q9H1C7 97 aa4.68□□□□□ -1.66
LRRC28-211ENST00000558890 ZNF706Q9Y5V0 76 aaPredicted RBP4.68□□□□□ -1.66
LRRC28-211ENST00000558890 A0A087WSZ3 146 aa4.67□□□□□ -1.66
LRRC28-211ENST00000558890 KRTAP11-1Q8IUC1 163 aa4.67□□□□□ -1.66
LRRC28-211ENST00000558890 PSORS1C2Q9UIG4 136 aa4.67□□□□□ -1.66
LRRC28-211ENST00000558890 DMBT1Q9UGM3 2413 aaPredicted RBP4.67□□□□□ -1.66
LRRC28-211ENST00000558890 RPL37AP61513 92 aaKnown RBP4.66□□□□□ -1.66
LRRC28-211ENST00000558890 RPS28P62857 69 aaKnown RBP4.66□□□□□ -1.66
LRRC28-211ENST00000558890 KRTAP13-1Q8IUC0 172 aa4.66□□□□□ -1.66
LRRC28-211ENST00000558890 HCG22E2RYF7 251 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms