RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 SPRR1AP35321 89 aa9.59□□□□□ -0.87
CDC42BPB-203ENST00000558867 hADV29S1A0JD25 119 aa9.58□□□□□ -0.88
CDC42BPB-203ENST00000558867 KRTAP1-4P0C5Y4 121 aa9.58□□□□□ -0.88
CDC42BPB-203ENST00000558867 KRTAP4-16G5E9R7 235 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPB-203ENST00000558867 ORMDL1Q9P0S3 153 aa9.57□□□□□ -0.88
CDC42BPB-203ENST00000558867 GHRHP01286 108 aa9.55□□□□□ -0.88
CDC42BPB-203ENST00000558867 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.54□□□□□ -0.88
CDC42BPB-203ENST00000558867 TMEM256-PLSCR3K7ERE1 68 aa9.53□□□□□ -0.88
CDC42BPB-203ENST00000558867 KRTAP11-1Q8IUC1 163 aa9.53□□□□□ -0.88
CDC42BPB-203ENST00000558867 ZNF861PO60384 105 aa9.52□□□□□ -0.89
CDC42BPB-203ENST00000558867 OBSCN-AS1Q96MR7 158 aa9.52□□□□□ -0.89
CDC42BPB-203ENST00000558867 Q6ZRX8 168 aa9.51□□□□□ -0.89
CDC42BPB-203ENST00000558867 DHRS4-AS1Q9P1J3 65 aa9.51□□□□□ -0.89
CDC42BPB-203ENST00000558867 TEX49A0A1B0GTD5 131 aa9.5□□□□□ -0.89
CDC42BPB-203ENST00000558867 B5MCH6 92 aa9.5□□□□□ -0.89
CDC42BPB-203ENST00000558867 FAT4Q6V0I7 4981 aa9.49□□□□□ -0.89
CDC42BPB-203ENST00000558867 KRTAP9-6A0A140TA67 174 aa9.49□□□□□ -0.89
CDC42BPB-203ENST00000558867 RPL37AP8A6NKH3 93 aa9.49□□□□□ -0.89
CDC42BPB-203ENST00000558867 ETDCA0A1B0GVM5 59 aa9.48□□□□□ -0.89
CDC42BPB-203ENST00000558867 Q6ZQY7 126 aa9.48□□□□□ -0.89
CDC42BPB-203ENST00000558867 JMJD7-PLA2G4BH0Y9G9 81 aa9.47□□□□□ -0.89
CDC42BPB-203ENST00000558867 FAM240AA0A1B0GVK7 77 aa9.46□□□□□ -0.9
CDC42BPB-203ENST00000558867 LCE2AQ5TA79 106 aaPredicted RBP9.46□□□□□ -0.9
CDC42BPB-203ENST00000558867 TYMSOSQ8TAI1 123 aa9.46□□□□□ -0.9
CDC42BPB-203ENST00000558867 CRYGAP11844 174 aa9.45□□□□□ -0.9
CDC42BPB-203ENST00000558867 Q9BRP9 147 aa9.43□□□□□ -0.9
CDC42BPB-203ENST00000558867 ACYP1P07311 99 aa9.41□□□□□ -0.9
CDC42BPB-203ENST00000558867 C21orf62-AS1Q17RA5 79 aa9.41□□□□□ -0.9
CDC42BPB-203ENST00000558867 CDIP1Q9H305 208 aa9.41□□□□□ -0.9
CDC42BPB-203ENST00000558867 IGLV5-48A0A075B6I7 105 aa9.4□□□□□ -0.9
CDC42BPB-203ENST00000558867 A0A087X002 238 aa9.38□□□□□ -0.91
CDC42BPB-203ENST00000558867 BCE1O60756 84 aa9.38□□□□□ -0.91
CDC42BPB-203ENST00000558867 LINC01547P58512 204 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPB-203ENST00000558867 SMCR5Q8TEV8 140 aa9.38□□□□□ -0.91
CDC42BPB-203ENST00000558867 VPS25Q9BRG1 176 aa9.38□□□□□ -0.91
CDC42BPB-203ENST00000558867 PDE6GP18545 87 aa9.37□□□□□ -0.91
CDC42BPB-203ENST00000558867 FAM19A1Q7Z5A9 133 aa9.37□□□□□ -0.91
CDC42BPB-203ENST00000558867 LOC110117498A0A087WWA1 95 aa9.36□□□□□ -0.91
CDC42BPB-203ENST00000558867 RBM3P98179 157 aaKnown RBP9.36□□□□□ -0.91
CDC42BPB-203ENST00000558867 NDUFV3P56181 108 aaKnown RBP9.35□□□□□ -0.91
CDC42BPB-203ENST00000558867 KRTAP13-1Q8IUC0 172 aa9.35□□□□□ -0.91
CDC42BPB-203ENST00000558867 Q8N377 158 aa9.35□□□□□ -0.91
CDC42BPB-203ENST00000558867 C14orf132Q9NPU4 83 aa9.35□□□□□ -0.91
CDC42BPB-203ENST00000558867 LAMTOR3Q9UHA4 124 aa9.35□□□□□ -0.91
CDC42BPB-203ENST00000558867 TPRXLQ17RH7 258 aa9.34□□□□□ -0.91
CDC42BPB-203ENST00000558867 CCKP06307 115 aa9.33□□□□□ -0.92
CDC42BPB-203ENST00000558867 LINC00304Q8N9R0 145 aa9.33□□□□□ -0.92
CDC42BPB-203ENST00000558867 TRBV7-4A0A0J9YYF1 115 aa9.32□□□□□ -0.92
CDC42BPB-203ENST00000558867 ERC2-IT1O76042 136 aa9.32□□□□□ -0.92
CDC42BPB-203ENST00000558867 FAM229BQ4G0N7 80 aa9.32□□□□□ -0.92
CDC42BPB-203ENST00000558867 RETNLBQ9BQ08 111 aa9.32□□□□□ -0.92
CDC42BPB-203ENST00000558867 IGLV7-46A0A075B6I9 117 aa9.31□□□□□ -0.92
CDC42BPB-203ENST00000558867 UBE2AP49459 152 aa9.31□□□□□ -0.92
CDC42BPB-203ENST00000558867 PRLHP81277 87 aa9.31□□□□□ -0.92
CDC42BPB-203ENST00000558867 Q6ZQT0 140 aa9.31□□□□□ -0.92
CDC42BPB-203ENST00000558867 SPRR1BP22528 89 aa9.3□□□□□ -0.92
CDC42BPB-203ENST00000558867 DSCR8Q96T75 97 aa9.3□□□□□ -0.92
CDC42BPB-203ENST00000558867 GAGE2AQ6NT46 116 aa9.29□□□□□ -0.92
CDC42BPB-203ENST00000558867 ST20-AS1Q8NBB2 130 aa9.28□□□□□ -0.92
CDC42BPB-203ENST00000558867 ANAPC11Q9NYG5 84 aa9.28□□□□□ -0.92
CDC42BPB-203ENST00000558867 MUC17Q685J3 4493 aa9.27□□□□□ -0.93
CDC42BPB-203ENST00000558867 HIGD2AQ9BW72 106 aa9.27□□□□□ -0.93
CDC42BPB-203ENST00000558867 KRTAP13-2Q52LG2 175 aa9.26□□□□□ -0.93
CDC42BPB-203ENST00000558867 IGLV8-61A0A075B6I0 122 aa9.25□□□□□ -0.93
CDC42BPB-203ENST00000558867 SMIM29Q86T20 159 aa9.25□□□□□ -0.93
CDC42BPB-203ENST00000558867 DEFB105AQ8NG35 78 aa9.25□□□□□ -0.93
CDC42BPB-203ENST00000558867 SIGMAR1Q99720 223 aa9.25□□□□□ -0.93
CDC42BPB-203ENST00000558867 A0A1B0GW54 56 aa9.24□□□□□ -0.93
CDC42BPB-203ENST00000558867 A0A1B0GV72 72 aa9.22□□□□□ -0.93
CDC42BPB-203ENST00000558867 LINC00643Q86TS7 51 aa9.22□□□□□ -0.93
CDC42BPB-203ENST00000558867 SPAG11AQ6PDA7 123 aa9.21□□□□□ -0.94
CDC42BPB-203ENST00000558867 ZNF706Q9Y5V0 76 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPB-203ENST00000558867 LINC00846Q9NV44 126 aa9.2□□□□□ -0.94
CDC42BPB-203ENST00000558867 F8WEM9 126 aa9.19□□□□□ -0.94
CDC42BPB-203ENST00000558867 LINC00483Q53H64 154 aa9.19□□□□□ -0.94
CDC42BPB-203ENST00000558867 C4orf48Q5BLP8 95 aa9.18□□□□□ -0.94
CDC42BPB-203ENST00000558867 FP248Q71RG6 208 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPB-203ENST00000558867 C3orf22Q8N5N4 141 aa9.18□□□□□ -0.94
CDC42BPB-203ENST00000558867 MT-ATP8P03928 68 aa9.17□□□□□ -0.94
CDC42BPB-203ENST00000558867 Q6JHZ5 121 aa9.17□□□□□ -0.94
CDC42BPB-203ENST00000558867 SPRR4Q96PI1 79 aa9.17□□□□□ -0.94
CDC42BPB-203ENST00000558867 Q6Q795 121 aa9.16□□□□□ -0.94
CDC42BPB-203ENST00000558867 TRBV7-7A0A0K0K1E9 115 aa9.15□□□□□ -0.94
CDC42BPB-203ENST00000558867 SCGB1A1P11684 91 aa9.15□□□□□ -0.94
CDC42BPB-203ENST00000558867 LCE2DQ5TA82 110 aaPredicted RBP9.15□□□□□ -0.94
CDC42BPB-203ENST00000558867 UBL5Q9BZL1 73 aa9.15□□□□□ -0.94
CDC42BPB-203ENST00000558867 IMUPQ9GZP8 106 aa9.15□□□□□ -0.94
CDC42BPB-203ENST00000558867 ATP5EP2Q5VTU8 51 aa9.14□□□□□ -0.95
CDC42BPB-203ENST00000558867 Q8NBF4 154 aa9.14□□□□□ -0.95
CDC42BPB-203ENST00000558867 SEC61BP60468 96 aaKnown RBP9.12□□□□□ -0.95
CDC42BPB-203ENST00000558867 A0A1W2PNM2 257 aa9.11□□□□□ -0.95
CDC42BPB-203ENST00000558867 ASB16-AS1Q495Z4 193 aa9.11□□□□□ -0.95
CDC42BPB-203ENST00000558867 IGFL1Q6UW32 110 aa9.1□□□□□ -0.95
CDC42BPB-203ENST00000558867 CRCT1Q9UGL9 99 aa9.09□□□□□ -0.95
CDC42BPB-203ENST00000558867 FSIP2Q5CZC0 6907 aa9.08□□□□□ -0.96
CDC42BPB-203ENST00000558867 Q6ZVQ6 151 aa9.08□□□□□ -0.96
CDC42BPB-203ENST00000558867 KRTAP13-3Q3SY46 172 aa9.06□□□□□ -0.96
CDC42BPB-203ENST00000558867 CXCL6P80162 114 aa9.05□□□□□ -0.96
CDC42BPB-203ENST00000558867 SPINK1P00995 79 aa9.04□□□□□ -0.96
CDC42BPB-203ENST00000558867 NREPQ16612 68 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 192.9 ms