RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 C1orf195Q5TG92 126 aa6.85□□□□□ -1.31
CSPG4P5-201ENST00000558731 Q9BRP9 147 aa6.85□□□□□ -1.31
CSPG4P5-201ENST00000558731 Q6ZRN7 208 aaPredicted RBP6.85□□□□□ -1.31
CSPG4P5-201ENST00000558731 SRRM2Q9UQ35 2752 aaKnown RBP6.85□□□□□ -1.31
CSPG4P5-201ENST00000558731 A0A0G2JQZ4 141 aa6.85□□□□□ -1.31
CSPG4P5-201ENST00000558731 TMEM254Q8TBM7 123 aa6.85□□□□□ -1.31
CSPG4P5-201ENST00000558731 DHRS4-AS1Q9P1J3 65 aa6.85□□□□□ -1.31
CSPG4P5-201ENST00000558731 KLKP1Q107X0 134 aa6.84□□□□□ -1.31
CSPG4P5-201ENST00000558731 LINC00476Q8WZB0 136 aa6.84□□□□□ -1.31
CSPG4P5-201ENST00000558731 NDUFC1O43677 76 aa6.83□□□□□ -1.32
CSPG4P5-201ENST00000558731 PDE6GP18545 87 aa6.83□□□□□ -1.32
CSPG4P5-201ENST00000558731 FP248Q71RG6 208 aaPredicted RBP6.83□□□□□ -1.32
CSPG4P5-201ENST00000558731 V9GYY9 64 aa6.83□□□□□ -1.32
CSPG4P5-201ENST00000558731 PLA2G2DQ9UNK4 145 aa6.82□□□□□ -1.32
CSPG4P5-201ENST00000558731 KRTAP11-1Q8IUC1 163 aa6.82□□□□□ -1.32
CSPG4P5-201ENST00000558731 Q8N377 158 aa6.81□□□□□ -1.32
CSPG4P5-201ENST00000558731 EPM2AB3EWF7 344 aa6.8□□□□□ -1.32
CSPG4P5-201ENST00000558731 CXCL6P80162 114 aa6.8□□□□□ -1.32
CSPG4P5-201ENST00000558731 PRR4Q16378 134 aa6.8□□□□□ -1.32
CSPG4P5-201ENST00000558731 IGLV5-37A0A075B6J1 123 aa6.79□□□□□ -1.32
CSPG4P5-201ENST00000558731 Q6ZR54 194 aa6.79□□□□□ -1.32
CSPG4P5-201ENST00000558731 LOC110117498A0A087WWA1 95 aa6.79□□□□□ -1.32
CSPG4P5-201ENST00000558731 ATP5EP56381 51 aaPredicted RBP6.78□□□□□ -1.32
CSPG4P5-201ENST00000558731 FAM30AQ9NZY2 134 aa6.78□□□□□ -1.32
CSPG4P5-201ENST00000558731 BCE1O60756 84 aa6.78□□□□□ -1.32
CSPG4P5-201ENST00000558731 C1orf137Q5JT78 98 aa6.78□□□□□ -1.32
CSPG4P5-201ENST00000558731 KMT2AQ03164 3969 aa6.77□□□□□ -1.33
CSPG4P5-201ENST00000558731 IGLV9-49A0A0B4J1Y8 123 aa6.76□□□□□ -1.33
CSPG4P5-201ENST00000558731 H3BQ85 93 aa6.76□□□□□ -1.33
CSPG4P5-201ENST00000558731 SPRR1AP35321 89 aa6.76□□□□□ -1.33
CSPG4P5-201ENST00000558731 KRTAP10-2P60368 255 aa6.76□□□□□ -1.33
CSPG4P5-201ENST00000558731 FAM229BQ4G0N7 80 aa6.76□□□□□ -1.33
CSPG4P5-201ENST00000558731 KRTAP4-16G5E9R7 235 aaPredicted RBP6.75□□□□□ -1.33
CSPG4P5-201ENST00000558731 SEC61GP60059 68 aa6.75□□□□□ -1.33
CSPG4P5-201ENST00000558731 KRTAP21-3Q3LHN1 58 aa6.75□□□□□ -1.33
CSPG4P5-201ENST00000558731 SPACA4Q8TDM5 124 aa6.74□□□□□ -1.33
CSPG4P5-201ENST00000558731 ANAPC11Q9NYG5 84 aa6.74□□□□□ -1.33
CSPG4P5-201ENST00000558731 TRBV7-4A0A0J9YYF1 115 aa6.74□□□□□ -1.33
CSPG4P5-201ENST00000558731 PSPHP1O15172 72 aa6.74□□□□□ -1.33
CSPG4P5-201ENST00000558731 DEFB116Q30KQ4 102 aa6.74□□□□□ -1.33
CSPG4P5-201ENST00000558731 DNAH1Q9P2D7 4330 aa6.73□□□□□ -1.33
CSPG4P5-201ENST00000558731 PSORS1C2Q9UIG4 136 aa6.72□□□□□ -1.33
CSPG4P5-201ENST00000558731 SMIM29Q86T20 159 aa6.7□□□□□ -1.34
CSPG4P5-201ENST00000558731 A0A087WSZ3 146 aa6.69□□□□□ -1.34
CSPG4P5-201ENST00000558731 A0A1W2PNM2 257 aa6.67□□□□□ -1.34
CSPG4P5-201ENST00000558731 IGKV4-1P06312 121 aa6.67□□□□□ -1.34
CSPG4P5-201ENST00000558731 CIRBP-AS1Q8TBR5 109 aa6.67□□□□□ -1.34
CSPG4P5-201ENST00000558731 VPS13DQ5THJ4 4388 aa6.67□□□□□ -1.34
CSPG4P5-201ENST00000558731 IGLV5-48A0A075B6I7 105 aa6.66□□□□□ -1.34
CSPG4P5-201ENST00000558731 IGFL1Q6UW32 110 aa6.66□□□□□ -1.34
CSPG4P5-201ENST00000558731 Q8NBF4 154 aa6.65□□□□□ -1.34
CSPG4P5-201ENST00000558731 KRTAP10-1P60331 282 aa6.65□□□□□ -1.35
CSPG4P5-201ENST00000558731 OCR1Q9BZK8 76 aa6.64□□□□□ -1.35
CSPG4P5-201ENST00000558731 PMAIP1Q13794 54 aa6.64□□□□□ -1.35
CSPG4P5-201ENST00000558731 MOBPQ13875 183 aa6.63□□□□□ -1.35
CSPG4P5-201ENST00000558731 WFDC13Q8IUB5 93 aa6.63□□□□□ -1.35
CSPG4P5-201ENST00000558731 C1orf64Q8NEQ6 169 aa6.62□□□□□ -1.35
CSPG4P5-201ENST00000558731 SPTSSBQ8NFR3 76 aa6.62□□□□□ -1.35
CSPG4P5-201ENST00000558731 PLAC8Q9NZF1 115 aa6.62□□□□□ -1.35
CSPG4P5-201ENST00000558731 DYNC2H1Q8NCM8 4307 aaKnown RBP6.62□□□□□ -1.35
CSPG4P5-201ENST00000558731 SMR3BP02814 79 aaPredicted RBP6.61□□□□□ -1.35
CSPG4P5-201ENST00000558731 DNAH2Q9P225 4427 aa6.6□□□□□ -1.35
CSPG4P5-201ENST00000558731 ZNF861PO60384 105 aa6.6□□□□□ -1.35
CSPG4P5-201ENST00000558731 RPL37AP61513 92 aaKnown RBP6.59□□□□□ -1.35
CSPG4P5-201ENST00000558731 MP68P56378 58 aa6.59□□□□□ -1.36
CSPG4P5-201ENST00000558731 SPRR4Q96PI1 79 aa6.59□□□□□ -1.36
CSPG4P5-201ENST00000558731 SPINK6Q6UWN8 80 aa6.58□□□□□ -1.36
CSPG4P5-201ENST00000558731 hDV103S1A0JD37 113 aa6.58□□□□□ -1.36
CSPG4P5-201ENST00000558731 A8MUN3 132 aa6.58□□□□□ -1.36
CSPG4P5-201ENST00000558731 H0Y9J4 135 aa6.58□□□□□ -1.36
CSPG4P5-201ENST00000558731 IGLV7-43P04211 117 aa6.58□□□□□ -1.36
CSPG4P5-201ENST00000558731 ZNF706Q9Y5V0 76 aaPredicted RBP6.58□□□□□ -1.36
CSPG4P5-201ENST00000558731 CHKB-CPT1BH3BT56 60 aa6.57□□□□□ -1.36
CSPG4P5-201ENST00000558731 LINC00208Q96KT6 92 aa6.57□□□□□ -1.36
CSPG4P5-201ENST00000558731 HYDINQ4G0P3 5121 aa6.57□□□□□ -1.36
CSPG4P5-201ENST00000558731 K7EQZ3 153 aa6.56□□□□□ -1.36
CSPG4P5-201ENST00000558731 TRAV22A0A0B4J277 110 aa6.56□□□□□ -1.36
CSPG4P5-201ENST00000558731 LCE6AA0A183 80 aa6.54□□□□□ -1.36
CSPG4P5-201ENST00000558731 DNAH11Q96DT5 4516 aa6.54□□□□□ -1.36
CSPG4P5-201ENST00000558731 KRTAP13-1Q8IUC0 172 aa6.53□□□□□ -1.36
CSPG4P5-201ENST00000558731 HCG22E2RYF7 251 aa6.52□□□□□ -1.37
CSPG4P5-201ENST00000558731 PRR15LQ9BU68 103 aa6.52□□□□□ -1.37
CSPG4P5-201ENST00000558731 DNAH6Q9C0G6 4158 aa6.51□□□□□ -1.37
CSPG4P5-201ENST00000558731 PRR15Q8IV56 129 aa6.51□□□□□ -1.37
CSPG4P5-201ENST00000558731 CDK2AP2O75956 126 aa6.51□□□□□ -1.37
CSPG4P5-201ENST00000558731 NDUFB1O75438 58 aa6.51□□□□□ -1.37
CSPG4P5-201ENST00000558731 A6NED7 52 aa6.5□□□□□ -1.37
CSPG4P5-201ENST00000558731 SPRR1BP22528 89 aa6.49□□□□□ -1.37
CSPG4P5-201ENST00000558731 Q1T7F1 81 aa6.49□□□□□ -1.37
CSPG4P5-201ENST00000558731 DSCR10P59022 87 aa6.48□□□□□ -1.37
CSPG4P5-201ENST00000558731 DNAH17Q9UFH2 4485 aa6.48□□□□□ -1.37
CSPG4P5-201ENST00000558731 HECTD4Q9Y4D8 3996 aa6.48□□□□□ -1.37
CSPG4P5-201ENST00000558731 FRAS1Q86XX4 4008 aa6.47□□□□□ -1.37
CSPG4P5-201ENST00000558731 A8MU10 97 aa6.47□□□□□ -1.37
CSPG4P5-201ENST00000558731 NDUFS5O43920 106 aa6.47□□□□□ -1.37
CSPG4P5-201ENST00000558731 IGHV6-1A0A0B4J1U7 121 aa6.46□□□□□ -1.37
CSPG4P5-201ENST00000558731 IGLV8-61A0A075B6I0 122 aa6.46□□□□□ -1.38
CSPG4P5-201ENST00000558731 H0Y9P7 68 aa6.46□□□□□ -1.38
CSPG4P5-201ENST00000558731 PLA2G1BP04054 148 aaKnown RBP6.46□□□□□ -1.38
CSPG4P5-201ENST00000558731 A0A087X002 238 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms