RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 DEFB116Q30KQ4 102 aa7.12□□□□□ -1.27
PCAT29-201ENST00000558411 COA5Q86WW8 74 aa7.12□□□□□ -1.27
PCAT29-201ENST00000558411 MTORP42345 2549 aa7.12□□□□□ -1.27
PCAT29-201ENST00000558411 NIPBLQ6KC79 2804 aaeCLIP7.12□□□□□ -1.27
PCAT29-201ENST00000558411 IGLV7-46A0A075B6I9 117 aa7.12□□□□□ -1.27
PCAT29-201ENST00000558411 C7orf65Q6ZTY9 151 aa7.11□□□□□ -1.27
PCAT29-201ENST00000558411 ANK3Q12955 4377 aaKnown RBP7.1□□□□□ -1.27
PCAT29-201ENST00000558411 LINC01556Q5JQF7 62 aa7.1□□□□□ -1.27
PCAT29-201ENST00000558411 A0A087WSZ3 146 aa7.09□□□□□ -1.27
PCAT29-201ENST00000558411 SMR3AQ99954 134 aa7.09□□□□□ -1.27
PCAT29-201ENST00000558411 PLAC8Q9NZF1 115 aa7.09□□□□□ -1.27
PCAT29-201ENST00000558411 LINC01558Q9Y6Z2 57 aa7.09□□□□□ -1.27
PCAT29-201ENST00000558411 KRTAP1-1Q07627 177 aa7.09□□□□□ -1.28
PCAT29-201ENST00000558411 FAM168BA1KXE4 195 aa7.08□□□□□ -1.28
PCAT29-201ENST00000558411 KRTAP10-3P60369 221 aa7.08□□□□□ -1.28
PCAT29-201ENST00000558411 CNBPP62633 177 aaKnown RBP7.08□□□□□ -1.28
PCAT29-201ENST00000558411 A8MWP4 228 aa7.07□□□□□ -1.28
PCAT29-201ENST00000558411 REG3GQ6UW15 175 aa7.07□□□□□ -1.28
PCAT29-201ENST00000558411 KRTAP7-1Q8IUC3 87 aa7.07□□□□□ -1.28
PCAT29-201ENST00000558411 NBEAL2Q6ZNJ1 2754 aa7.07□□□□□ -1.28
PCAT29-201ENST00000558411 MAST4O15021 2626 aa7.07□□□□□ -1.28
PCAT29-201ENST00000558411 NSD1Q96L73 2696 aaPredicted RBP7.07□□□□□ -1.28
PCAT29-201ENST00000558411 RPL37AP61513 92 aaKnown RBP7.07□□□□□ -1.28
PCAT29-201ENST00000558411 TEP1Q99973 2627 aaKnown RBP7.07□□□□□ -1.28
PCAT29-201ENST00000558411 MOBPQ13875 183 aa7.05□□□□□ -1.28
PCAT29-201ENST00000558411 F8P00451 2351 aa7.05□□□□□ -1.28
PCAT29-201ENST00000558411 A0A0G2JQZ4 141 aa7.04□□□□□ -1.28
PCAT29-201ENST00000558411 A0A1W2PNN7 141 aa7.04□□□□□ -1.28
PCAT29-201ENST00000558411 LINC00472Q9H8W2 130 aa7.03□□□□□ -1.28
PCAT29-201ENST00000558411 HIVEP2P31629 2446 aa7.02□□□□□ -1.29
PCAT29-201ENST00000558411 DNAH10OSP0CZ25 163 aa7□□□□□ -1.29
PCAT29-201ENST00000558411 TP53AIP1Q9HCN2 124 aa7□□□□□ -1.29
PCAT29-201ENST00000558411 SETD2Q9BYW2 2564 aaPredicted RBP7□□□□□ -1.29
PCAT29-201ENST00000558411 MMP24-AS1A0A0U1RRL7 71 aa7□□□□□ -1.29
PCAT29-201ENST00000558411 SPAG11AQ6PDA7 123 aa6.98□□□□□ -1.29
PCAT29-201ENST00000558411 SPRR1BP22528 89 aa6.98□□□□□ -1.29
PCAT29-201ENST00000558411 Q6ZR54 194 aa6.97□□□□□ -1.29
PCAT29-201ENST00000558411 ASB16-AS1Q495Z4 193 aa6.96□□□□□ -1.3
PCAT29-201ENST00000558411 INAFM1C9JVW0 142 aa6.95□□□□□ -1.3
PCAT29-201ENST00000558411 SPINK7P58062 85 aa6.95□□□□□ -1.3
PCAT29-201ENST00000558411 KRTAP21-3Q3LHN1 58 aa6.95□□□□□ -1.3
PCAT29-201ENST00000558411 PRLHP81277 87 aa6.95□□□□□ -1.3
PCAT29-201ENST00000558411 PCOTHQ58A44 107 aa6.94□□□□□ -1.3
PCAT29-201ENST00000558411 H0Y9J4 135 aa6.94□□□□□ -1.3
PCAT29-201ENST00000558411 HRES1P13985 223 aa6.93□□□□□ -1.3
PCAT29-201ENST00000558411 TENM1Q9UKZ4 2725 aa6.93□□□□□ -1.3
PCAT29-201ENST00000558411 C8orf87E5RJ46 101 aa6.92□□□□□ -1.3
PCAT29-201ENST00000558411 DEFB131BA0A096LNP1 70 aa6.91□□□□□ -1.3
PCAT29-201ENST00000558411 IGKV2-24A0A0C4DH68 120 aa6.91□□□□□ -1.3
PCAT29-201ENST00000558411 CASC10Q5T4H9 136 aa6.91□□□□□ -1.3
PCAT29-201ENST00000558411 FBN1P35555 2871 aaKnown RBP6.9□□□□□ -1.3
PCAT29-201ENST00000558411 C11orf45Q8TAV5 145 aa6.9□□□□□ -1.3
PCAT29-201ENST00000558411 ATRQ13535 2644 aa6.88□□□□□ -1.31
PCAT29-201ENST00000558411 C4orf48Q5BLP8 95 aa6.88□□□□□ -1.31
PCAT29-201ENST00000558411 A0A087X002 238 aa6.88□□□□□ -1.31
PCAT29-201ENST00000558411 LINC00313P59037 77 aa6.88□□□□□ -1.31
PCAT29-201ENST00000558411 C8orf17Q9NRJ1 99 aa6.86□□□□□ -1.31
PCAT29-201ENST00000558411 VWFP04275 2813 aa6.86□□□□□ -1.31
PCAT29-201ENST00000558411 PLA2G1BP04054 148 aaKnown RBP6.86□□□□□ -1.31
PCAT29-201ENST00000558411 A0A096LNI7 61 aa6.85□□□□□ -1.31
PCAT29-201ENST00000558411 Q96NJ1 140 aa6.85□□□□□ -1.31
PCAT29-201ENST00000558411 TRRAPQ9Y4A5 3859 aa6.82□□□□□ -1.32
PCAT29-201ENST00000558411 A0A1B0GVX0 72 aa6.8□□□□□ -1.32
PCAT29-201ENST00000558411 MRPL34Q9BQ48 92 aaKnown RBP6.8□□□□□ -1.32
PCAT29-201ENST00000558411 STAB1Q9NY15 2570 aa6.8□□□□□ -1.32
PCAT29-201ENST00000558411 LINC01554Q52M75 96 aa6.8□□□□□ -1.32
PCAT29-201ENST00000558411 PRAC1Q96KF2 57 aa6.79□□□□□ -1.32
PCAT29-201ENST00000558411 COL6A5A8TX70 2615 aa6.78□□□□□ -1.32
PCAT29-201ENST00000558411 ACYP2P14621 99 aa6.78□□□□□ -1.32
PCAT29-201ENST00000558411 PRR26Q8N8Z3 221 aa6.78□□□□□ -1.32
PCAT29-201ENST00000558411 DNAH1Q9P2D7 4330 aa6.78□□□□□ -1.32
PCAT29-201ENST00000558411 KRTAP11-1Q8IUC1 163 aa6.77□□□□□ -1.33
PCAT29-201ENST00000558411 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
PCAT29-201ENST00000558411 MDFIQ99750 246 aa6.77□□□□□ -1.33
PCAT29-201ENST00000558411 PKD1L1Q8TDX9 2849 aa6.76□□□□□ -1.33
PCAT29-201ENST00000558411 IGHV6-1A0A0B4J1U7 121 aa6.76□□□□□ -1.33
PCAT29-201ENST00000558411 RTL8CO15255 209 aa6.76□□□□□ -1.33
PCAT29-201ENST00000558411 CDK2AP2O75956 126 aa6.76□□□□□ -1.33
PCAT29-201ENST00000558411 SPATA8Q6RVD6 105 aa6.76□□□□□ -1.33
PCAT29-201ENST00000558411 TENM2Q9NT68 2774 aa6.75□□□□□ -1.33
PCAT29-201ENST00000558411 KRTAP13-1Q8IUC0 172 aa6.74□□□□□ -1.33
PCAT29-201ENST00000558411 KRTAP10-11P60412 298 aa6.73□□□□□ -1.33
PCAT29-201ENST00000558411 KRTAP24-1Q3LI83 254 aa6.73□□□□□ -1.33
PCAT29-201ENST00000558411 KRTAP13-3Q3SY46 172 aa6.73□□□□□ -1.33
PCAT29-201ENST00000558411 ADM2Q7Z4H4 148 aa6.73□□□□□ -1.33
PCAT29-201ENST00000558411 DMAC1Q96GE9 116 aa6.71□□□□□ -1.33
PCAT29-201ENST00000558411 A0A1B0GU69 56 aa6.71□□□□□ -1.34
PCAT29-201ENST00000558411 C14orf177Q52M58 125 aa6.71□□□□□ -1.34
PCAT29-201ENST00000558411 LINC00483Q53H64 154 aa6.71□□□□□ -1.34
PCAT29-201ENST00000558411 ALMS1Q8TCU4 4167 aa6.7□□□□□ -1.34
PCAT29-201ENST00000558411 ANK2Q01484 3957 aa6.69□□□□□ -1.34
PCAT29-201ENST00000558411 CMYA5Q8N3K9 4069 aa6.69□□□□□ -1.34
PCAT29-201ENST00000558411 IGLV9-49A0A0B4J1Y8 123 aa6.69□□□□□ -1.34
PCAT29-201ENST00000558411 CHTF8P0CG12 524 aa6.69□□□□□ -1.34
PCAT29-201ENST00000558411 OXLD1Q5BKU9 147 aa6.69□□□□□ -1.34
PCAT29-201ENST00000558411 Q5W150 140 aa6.67□□□□□ -1.34
PCAT29-201ENST00000558411 H3BS24 57 aa6.67□□□□□ -1.34
PCAT29-201ENST00000558411 K7EIL1 84 aa6.66□□□□□ -1.34
PCAT29-201ENST00000558411 UQCR11O14957 56 aa6.66□□□□□ -1.34
PCAT29-201ENST00000558411 MIR22HGQ0VDD5 57 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms