RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SLC25A20O43772 301 aa2.87□□□□□ -1.95
SPG11-208ENST00000558155 SMIM13P0DJ93 91 aa2.87□□□□□ -1.95
SPG11-208ENST00000558155 NMUP48645 174 aa2.87□□□□□ -1.95
SPG11-208ENST00000558155 ORMDL2Q53FV1 153 aa2.87□□□□□ -1.95
SPG11-208ENST00000558155 BAGE3Q86Y29 109 aa2.87□□□□□ -1.95
SPG11-208ENST00000558155 PRELID3AQ96N28 172 aa2.87□□□□□ -1.95
SPG11-208ENST00000558155 TRAPPC1Q9Y5R8 145 aa2.87□□□□□ -1.95
SPG11-208ENST00000558155 IGLV8-61A0A075B6I0 122 aa2.86□□□□□ -1.95
SPG11-208ENST00000558155 SMIM26A0A096LP01 95 aa2.86□□□□□ -1.95
SPG11-208ENST00000558155 IGIPA6NJ69 53 aa2.86□□□□□ -1.95
SPG11-208ENST00000558155 K7EMI3 77 aa2.86□□□□□ -1.95
SPG11-208ENST00000558155 M0R378 163 aa2.86□□□□□ -1.95
SPG11-208ENST00000558155 SRP19P09132 144 aaKnown RBP2.86□□□□□ -1.95
SPG11-208ENST00000558155 RPS29P62273 56 aaKnown RBP2.86□□□□□ -1.95
SPG11-208ENST00000558155 KRTAP19-2Q3LHN2 52 aa2.86□□□□□ -1.95
SPG11-208ENST00000558155 KRTAP15-1Q3LI76 137 aa2.86□□□□□ -1.95
SPG11-208ENST00000558155 LINC01545Q5VT33 79 aa2.86□□□□□ -1.95
SPG11-208ENST00000558155 SSBP3-AS1Q7Z2R9 100 aa2.86□□□□□ -1.95
SPG11-208ENST00000558155 Q8N8P6 123 aa2.86□□□□□ -1.95
SPG11-208ENST00000558155 BRK1Q8WUW1 75 aa2.86□□□□□ -1.95
SPG11-208ENST00000558155 SMIM1B2RUZ4 78 aa2.85□□□□□ -1.95
SPG11-208ENST00000558155 C9JQL5 133 aa2.85□□□□□ -1.95
SPG11-208ENST00000558155 NPC2P61916 151 aa2.85□□□□□ -1.95
SPG11-208ENST00000558155 RPL23P62829 140 aaKnown RBP2.85□□□□□ -1.95
SPG11-208ENST00000558155 ETDBQ3ZM63 59 aa2.85□□□□□ -1.95
SPG11-208ENST00000558155 PCOTHQ58A44 107 aa2.85□□□□□ -1.95
SPG11-208ENST00000558155 PRR15Q8IV56 129 aa2.85□□□□□ -1.95
SPG11-208ENST00000558155 Q8N377 158 aa2.85□□□□□ -1.95
SPG11-208ENST00000558155 SERP1Q9Y6X1 66 aa2.85□□□□□ -1.95
SPG11-208ENST00000558155 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
SPG11-208ENST00000558155 TRBV7-6A0A0J9YX20 115 aa2.84□□□□□ -1.95
SPG11-208ENST00000558155 A0A1B0GXF2 115 aa2.84□□□□□ -1.95
SPG11-208ENST00000558155 ATOX1O00244 68 aa2.84□□□□□ -1.95
SPG11-208ENST00000558155 TRIAP1O43715 76 aa2.84□□□□□ -1.95
SPG11-208ENST00000558155 NDUFS5O43920 106 aa2.84□□□□□ -1.95
SPG11-208ENST00000558155 COX7CP15954 63 aa2.84□□□□□ -1.95
SPG11-208ENST00000558155 COX17Q14061 63 aa2.84□□□□□ -1.95
SPG11-208ENST00000558155 TEN1Q86WV5 123 aa2.84□□□□□ -1.95
SPG11-208ENST00000558155 SMCR5Q8TEV8 140 aa2.84□□□□□ -1.95
SPG11-208ENST00000558155 TIMM17AQ99595 171 aa2.84□□□□□ -1.95
SPG11-208ENST00000558155 SND1-IT1Q9HBX3 110 aa2.84□□□□□ -1.95
SPG11-208ENST00000558155 IGLV5-45A0A087WSX0 123 aa2.83□□□□□ -1.96
SPG11-208ENST00000558155 TRBV7-7A0A0K0K1E9 115 aa2.83□□□□□ -1.96
SPG11-208ENST00000558155 PSMB2P49721 201 aa2.83□□□□□ -1.96
SPG11-208ENST00000558155 ATP5L2Q7Z4Y8 100 aa2.83□□□□□ -1.96
SPG11-208ENST00000558155 SCGB3A1Q96QR1 104 aa2.83□□□□□ -1.96
SPG11-208ENST00000558155 NXT2Q9NPJ8 142 aaKnown RBP2.83□□□□□ -1.96
SPG11-208ENST00000558155 IGLV9-49A0A0B4J1Y8 123 aa2.82□□□□□ -1.96
SPG11-208ENST00000558155 H3BT86 120 aa2.82□□□□□ -1.96
SPG11-208ENST00000558155 SERF1AO75920 110 aa2.82□□□□□ -1.96
SPG11-208ENST00000558155 C3orf79P0CE67 100 aa2.82□□□□□ -1.96
SPG11-208ENST00000558155 SCGB1C2P0DMR2 95 aa2.82□□□□□ -1.96
SPG11-208ENST00000558155 LGALS3P17931 250 aaKnown RBP2.82□□□□□ -1.96
SPG11-208ENST00000558155 ATP5EP56381 51 aaPredicted RBP2.82□□□□□ -1.96
SPG11-208ENST00000558155 MOBPQ13875 183 aa2.82□□□□□ -1.96
SPG11-208ENST00000558155 LINC00483Q53H64 154 aa2.82□□□□□ -1.96
SPG11-208ENST00000558155 COX6B2Q6YFQ2 88 aa2.82□□□□□ -1.96
SPG11-208ENST00000558155 TOMM6Q96B49 74 aa2.82□□□□□ -1.96
SPG11-208ENST00000558155 ETDCA0A1B0GVM5 59 aa2.81□□□□□ -1.96
SPG11-208ENST00000558155 LINC01549A6NIU2 74 aa2.81□□□□□ -1.96
SPG11-208ENST00000558155 E9PLD3 99 aa2.81□□□□□ -1.96
SPG11-208ENST00000558155 PRYO14603 147 aa2.81□□□□□ -1.96
SPG11-208ENST00000558155 COX8AP10176 69 aa2.81□□□□□ -1.96
SPG11-208ENST00000558155 KTN1-AS1Q86SY8 53 aa2.81□□□□□ -1.96
SPG11-208ENST00000558155 IGKCP01834 107 aa2.8□□□□□ -1.96
SPG11-208ENST00000558155 ACYP1P07311 99 aa2.8□□□□□ -1.96
SPG11-208ENST00000558155 LINC00158P58513 81 aa2.8□□□□□ -1.96
SPG11-208ENST00000558155 SFTA2Q6UW10 78 aa2.8□□□□□ -1.96
SPG11-208ENST00000558155 CEND1Q8N111 149 aa2.8□□□□□ -1.96
SPG11-208ENST00000558155 ZNF625Q96I27 306 aaPredicted RBP2.8□□□□□ -1.96
SPG11-208ENST00000558155 KCNQ1DNQ9H478 68 aa2.8□□□□□ -1.96
SPG11-208ENST00000558155 RBM12B-AS1Q9P1G2 102 aa2.8□□□□□ -1.96
SPG11-208ENST00000558155 IGLV5-39A0A0G2JS06 123 aa2.79□□□□□ -1.96
SPG11-208ENST00000558155 C9orf92A6NGG3 77 aa2.79□□□□□ -1.96
SPG11-208ENST00000558155 C8orf87E5RJ46 101 aa2.79□□□□□ -1.96
SPG11-208ENST00000558155 SPRR1AP35321 89 aa2.79□□□□□ -1.96
SPG11-208ENST00000558155 Q8NDZ9 215 aa2.79□□□□□ -1.96
SPG11-208ENST00000558155 KRTAP4-16G5E9R7 235 aaPredicted RBP2.78□□□□□ -1.96
SPG11-208ENST00000558155 CFC1P0CG37 223 aa2.78□□□□□ -1.96
SPG11-208ENST00000558155 LIMD2Q9BT23 127 aa2.78□□□□□ -1.96
SPG11-208ENST00000558155 HIGD1BQ9P298 99 aa2.78□□□□□ -1.96
SPG11-208ENST00000558155 PRO0461Q9UI25 63 aa2.78□□□□□ -1.96
SPG11-208ENST00000558155 ERC2-IT1O76042 136 aa2.77□□□□□ -1.97
SPG11-208ENST00000558155 IGLV6-57P01721 117 aa2.77□□□□□ -1.97
SPG11-208ENST00000558155 TMEM170BQ5T4T1 132 aa2.77□□□□□ -1.97
SPG11-208ENST00000558155 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
SPG11-208ENST00000558155 SERP2Q8N6R1 65 aa2.77□□□□□ -1.97
SPG11-208ENST00000558155 DSCR8Q96T75 97 aa2.77□□□□□ -1.97
SPG11-208ENST00000558155 TRBV10-3A0A0K0K1G6 114 aa2.76□□□□□ -1.97
SPG11-208ENST00000558155 NCR3O14931 201 aa2.76□□□□□ -1.97
SPG11-208ENST00000558155 TCL1BO95988 128 aa2.76□□□□□ -1.97
SPG11-208ENST00000558155 ZNF22P17026 224 aaPredicted RBP2.76□□□□□ -1.97
SPG11-208ENST00000558155 MP68P56378 58 aa2.76□□□□□ -1.97
SPG11-208ENST00000558155 HERVK_113P61574 105 aa2.76□□□□□ -1.97
SPG11-208ENST00000558155 C2orf91Q6ZV80 131 aa2.76□□□□□ -1.97
SPG11-208ENST00000558155 CHCHD1Q96BP2 118 aaKnown RBP2.76□□□□□ -1.97
SPG11-208ENST00000558155 hADV29S1A0JD25 119 aa2.75□□□□□ -1.97
SPG11-208ENST00000558155 LINC01546A6NGU7 62 aa2.75□□□□□ -1.97
SPG11-208ENST00000558155 NDUFC1O43677 76 aa2.75□□□□□ -1.97
SPG11-208ENST00000558155 Q6ZVQ6 151 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms