RNA–Protein interactions for RNA: ENST00000558139.1

LHX4-202, Transcript of LIM homeobox 4, humanhuman

TSL 3

Gene LHX4, Length 721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-202ENST00000558139 CLEC2BQ92478 149 aa8.28□□□□□ -1.08
LHX4-202ENST00000558139 A0A0J9YXY3 114 aa8.25□□□□□ -1.09
LHX4-202ENST00000558139 LINC00308Q8TCZ7 52 aa8.25□□□□□ -1.09
LHX4-202ENST00000558139 KRTAP2-2Q9BYT5 123 aa8.25□□□□□ -1.09
LHX4-202ENST00000558139 KRTAP2-1Q9BYU5 128 aa8.25□□□□□ -1.09
LHX4-202ENST00000558139 ZNF815PA8K554 130 aa8.24□□□□□ -1.09
LHX4-202ENST00000558139 HERVK_113P61574 105 aa8.24□□□□□ -1.09
LHX4-202ENST00000558139 LINC00518Q8N0U6 118 aa8.24□□□□□ -1.09
LHX4-202ENST00000558139 GPR98Q8WXG9 6306 aa8.23□□□□□ -1.09
LHX4-202ENST00000558139 NHP2Q9NX24 153 aaKnown RBP8.22□□□□□ -1.09
LHX4-202ENST00000558139 GHRHP01286 108 aa8.21□□□□□ -1.1
LHX4-202ENST00000558139 DSCR10P59022 87 aa8.21□□□□□ -1.1
LHX4-202ENST00000558139 A4D1N5 150 aa8.2□□□□□ -1.1
LHX4-202ENST00000558139 H0Y8G0 127 aa8.2□□□□□ -1.1
LHX4-202ENST00000558139 YPEL4Q96NS1 127 aa8.2□□□□□ -1.1
LHX4-202ENST00000558139 TRAV13-2A0A0B4J235 113 aa8.19□□□□□ -1.1
LHX4-202ENST00000558139 PLNP26678 52 aa8.18□□□□□ -1.1
LHX4-202ENST00000558139 TRAPPC1Q9Y5R8 145 aa8.18□□□□□ -1.1
LHX4-202ENST00000558139 COLCA2A8K830 154 aa8.16□□□□□ -1.1
LHX4-202ENST00000558139 OCIAD2Q56VL3 154 aa8.16□□□□□ -1.1
LHX4-202ENST00000558139 SS18L2Q9UHA2 77 aa8.16□□□□□ -1.1
LHX4-202ENST00000558139 CHCHD1Q96BP2 118 aaKnown RBP8.15□□□□□ -1.1
LHX4-202ENST00000558139 LITAFQ99732 161 aa8.13□□□□□ -1.11
LHX4-202ENST00000558139 DPM2O94777 84 aa8.11□□□□□ -1.11
LHX4-202ENST00000558139 LINC00313P59037 77 aa8.11□□□□□ -1.11
LHX4-202ENST00000558139 TIMM17BO60830 172 aa8.1□□□□□ -1.11
LHX4-202ENST00000558139 SPRR2EP22531 72 aa8.1□□□□□ -1.11
LHX4-202ENST00000558139 SPRR2BP35325 72 aa8.1□□□□□ -1.11
LHX4-202ENST00000558139 SPRR2AP35326 72 aa8.1□□□□□ -1.11
LHX4-202ENST00000558139 ANKRD39Q53RE8 183 aa8.1□□□□□ -1.11
LHX4-202ENST00000558139 A6NDN8 102 aa8.08□□□□□ -1.12
LHX4-202ENST00000558139 SERF1AO75920 110 aa8.07□□□□□ -1.12
LHX4-202ENST00000558139 IGKCP01834 107 aa8.07□□□□□ -1.12
LHX4-202ENST00000558139 KRTAP10-5P60370 271 aa8.05□□□□□ -1.12
LHX4-202ENST00000558139 E9PLD3 99 aa8.04□□□□□ -1.12
LHX4-202ENST00000558139 HSBP1O75506 76 aa8.04□□□□□ -1.12
LHX4-202ENST00000558139 PMCHL2Q9BQD1 86 aa8.04□□□□□ -1.12
LHX4-202ENST00000558139 Q6ZQY7 126 aa8.03□□□□□ -1.12
LHX4-202ENST00000558139 TRGC2P03986 189 aa8.02□□□□□ -1.13
LHX4-202ENST00000558139 MT1BP07438 61 aa8.02□□□□□ -1.13
LHX4-202ENST00000558139 SPINK7P58062 85 aa8.02□□□□□ -1.13
LHX4-202ENST00000558139 SIGMAR1Q99720 223 aa8.02□□□□□ -1.13
LHX4-202ENST00000558139 LEPROTL1O95214 131 aa8.01□□□□□ -1.13
LHX4-202ENST00000558139 SCGB1D1O95968 90 aa8.01□□□□□ -1.13
LHX4-202ENST00000558139 Q5VV11 94 aa8.01□□□□□ -1.13
LHX4-202ENST00000558139 TMEM238LA0A1B0GVL6 79 aa8□□□□□ -1.13
LHX4-202ENST00000558139 H3BUT2 72 aa8□□□□□ -1.13
LHX4-202ENST00000558139 FAM218AQ96MZ4 157 aa8□□□□□ -1.13
LHX4-202ENST00000558139 A0A1W2PNM2 257 aa7.99□□□□□ -1.13
LHX4-202ENST00000558139 VAMP3Q15836 100 aa7.99□□□□□ -1.13
LHX4-202ENST00000558139 SPRR2FQ96RM1 72 aa7.99□□□□□ -1.13
LHX4-202ENST00000558139 SNHG12Q9BXW3 62 aa7.99□□□□□ -1.13
LHX4-202ENST00000558139 HIST1H2BKO60814 126 aa7.98□□□□□ -1.13
LHX4-202ENST00000558139 HIST1H2BJP06899 126 aa7.98□□□□□ -1.13
LHX4-202ENST00000558139 HIST1H2BOP23527 126 aa7.98□□□□□ -1.13
LHX4-202ENST00000558139 HIST1H2BBP33778 126 aa7.98□□□□□ -1.13
LHX4-202ENST00000558139 HIST1H2BDP58876 126 aa7.98□□□□□ -1.13
LHX4-202ENST00000558139 HIST1H2BCP62807 126 aa7.98□□□□□ -1.13
LHX4-202ENST00000558139 HIST2H2BEQ16778 126 aa7.98□□□□□ -1.13
LHX4-202ENST00000558139 COA6Q5JTJ3 125 aaKnown RBP7.98□□□□□ -1.13
LHX4-202ENST00000558139 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.98□□□□□ -1.13
LHX4-202ENST00000558139 LINC00575Q6W349 94 aa7.98□□□□□ -1.13
LHX4-202ENST00000558139 HIST1H2BHQ93079 126 aa7.98□□□□□ -1.13
LHX4-202ENST00000558139 HIST1H2BNQ99877 126 aa7.98□□□□□ -1.13
LHX4-202ENST00000558139 HIST1H2BMQ99879 126 aa7.98□□□□□ -1.13
LHX4-202ENST00000558139 A0A087WSZ3 146 aa7.97□□□□□ -1.13
LHX4-202ENST00000558139 hADV29S1A0JD25 119 aa7.97□□□□□ -1.13
LHX4-202ENST00000558139 TEN1Q86WV5 123 aa7.97□□□□□ -1.13
LHX4-202ENST00000558139 SMIM11BQ8TCY0 68 aa7.97□□□□□ -1.13
LHX4-202ENST00000558139 S100A6P06703 90 aa7.95□□□□□ -1.14
LHX4-202ENST00000558139 C21orf62-AS1Q17RA5 79 aa7.95□□□□□ -1.14
LHX4-202ENST00000558139 COPS9Q8WXC6 57 aa7.95□□□□□ -1.14
LHX4-202ENST00000558139 WFDC13Q8IUB5 93 aa7.93□□□□□ -1.14
LHX4-202ENST00000558139 PPDPFLQ8WWR9 84 aa7.93□□□□□ -1.14
LHX4-202ENST00000558139 HSPB8Q9UJY1 196 aa7.93□□□□□ -1.14
LHX4-202ENST00000558139 IGKV4-1P06312 121 aa7.9□□□□□ -1.14
LHX4-202ENST00000558139 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.89□□□□□ -1.15
LHX4-202ENST00000558139 ZCCHC13Q8WW36 166 aaKnown RBP7.89□□□□□ -1.15
LHX4-202ENST00000558139 IFITM1P13164 125 aa7.88□□□□□ -1.15
LHX4-202ENST00000558139 FABP4P15090 132 aa7.88□□□□□ -1.15
LHX4-202ENST00000558139 KRTAP19-8Q3LI54 63 aa7.87□□□□□ -1.15
LHX4-202ENST00000558139 LINC00310P59036 64 aa7.86□□□□□ -1.15
LHX4-202ENST00000558139 SNRPEP62304 92 aaKnown RBP7.86□□□□□ -1.15
LHX4-202ENST00000558139 SPRR2DP22532 72 aa7.85□□□□□ -1.15
LHX4-202ENST00000558139 LCE1AQ5T7P2 110 aa7.85□□□□□ -1.15
LHX4-202ENST00000558139 HIST3H2BBQ8N257 126 aa7.85□□□□□ -1.15
LHX4-202ENST00000558139 S100A2P29034 98 aa7.84□□□□□ -1.15
LHX4-202ENST00000558139 H1FX-AS1Q4G0G2 97 aa7.84□□□□□ -1.15
LHX4-202ENST00000558139 TTTY13Q9BZ97 58 aa7.84□□□□□ -1.15
LHX4-202ENST00000558139 IGHV6-1A0A0B4J1U7 121 aa7.83□□□□□ -1.16
LHX4-202ENST00000558139 SCGB1D4Q6XE38 83 aa7.83□□□□□ -1.16
LHX4-202ENST00000558139 MUSTN1Q8IVN3 82 aa7.82□□□□□ -1.16
LHX4-202ENST00000558139 C3orf79P0CE67 100 aa7.81□□□□□ -1.16
LHX4-202ENST00000558139 HIST1H2BLQ99880 126 aa7.81□□□□□ -1.16
LHX4-202ENST00000558139 LOC105371267A0A1B0GV96 52 aa7.79□□□□□ -1.16
LHX4-202ENST00000558139 IMUPQ9GZP8 106 aa7.79□□□□□ -1.16
LHX4-202ENST00000558139 FAM236AA0A1B0GUQ0 79 aa7.78□□□□□ -1.16
LHX4-202ENST00000558139 FAM236BA0A1B0GV22 79 aa7.78□□□□□ -1.16
LHX4-202ENST00000558139 SPRR2GQ9BYE4 73 aa7.77□□□□□ -1.17
LHX4-202ENST00000558139 KRTAP3-3Q9BYR6 98 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 260.2 ms