RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 PCOTHQ58A44 107 aa6.93□□□□□ -1.3
SEMA4B-204ENST00000558065 REG3GQ6UW15 175 aa6.93□□□□□ -1.3
SEMA4B-204ENST00000558065 HRNRQ86YZ3 2850 aaPredicted RBP6.93□□□□□ -1.3
SEMA4B-204ENST00000558065 A0A1B0GUV1 79 aa6.93□□□□□ -1.3
SEMA4B-204ENST00000558065 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
SEMA4B-204ENST00000558065 CYSRT1A8MQ03 144 aa6.92□□□□□ -1.3
SEMA4B-204ENST00000558065 TEP1Q99973 2627 aaKnown RBP6.91□□□□□ -1.3
SEMA4B-204ENST00000558065 INAFM1C9JVW0 142 aa6.91□□□□□ -1.3
SEMA4B-204ENST00000558065 ZNF861PO60384 105 aa6.9□□□□□ -1.3
SEMA4B-204ENST00000558065 ZANQ9Y493 2812 aa6.9□□□□□ -1.31
SEMA4B-204ENST00000558065 RPL37AP61513 92 aaKnown RBP6.89□□□□□ -1.31
SEMA4B-204ENST00000558065 DEFB135Q30KP9 77 aa6.89□□□□□ -1.31
SEMA4B-204ENST00000558065 X6R8D5 127 aa6.89□□□□□ -1.31
SEMA4B-204ENST00000558065 VPS13CQ709C8 3753 aa6.89□□□□□ -1.31
SEMA4B-204ENST00000558065 TEX15Q9BXT5 2789 aa6.88□□□□□ -1.31
SEMA4B-204ENST00000558065 NOTCH2NLQ7Z3S9 236 aa6.88□□□□□ -1.31
SEMA4B-204ENST00000558065 MGAM2Q2M2H8 2515 aa6.88□□□□□ -1.31
SEMA4B-204ENST00000558065 GVQW2A0A096LPI5 108 aaPredicted RBP6.87□□□□□ -1.31
SEMA4B-204ENST00000558065 C6orf48Q9UBA6 75 aa6.87□□□□□ -1.31
SEMA4B-204ENST00000558065 KRTAP25-1Q3LHN0 102 aa6.86□□□□□ -1.31
SEMA4B-204ENST00000558065 NF1P21359 2839 aa6.86□□□□□ -1.31
SEMA4B-204ENST00000558065 PRR34Q9NV39 138 aa6.84□□□□□ -1.31
SEMA4B-204ENST00000558065 MAST4O15021 2626 aa6.83□□□□□ -1.32
SEMA4B-204ENST00000558065 GCN1Q92616 2671 aaKnown RBP6.82□□□□□ -1.32
SEMA4B-204ENST00000558065 DEFB131BA0A096LNP1 70 aa6.82□□□□□ -1.32
SEMA4B-204ENST00000558065 A0A0G2JQZ4 141 aa6.82□□□□□ -1.32
SEMA4B-204ENST00000558065 A0A1W2PNN7 141 aa6.82□□□□□ -1.32
SEMA4B-204ENST00000558065 APCP25054 2843 aa6.81□□□□□ -1.32
SEMA4B-204ENST00000558065 UBR5O95071 2799 aaPredicted RBP6.81□□□□□ -1.32
SEMA4B-204ENST00000558065 SPART-AS1P0CW21 52 aa6.81□□□□□ -1.32
SEMA4B-204ENST00000558065 CSNK1G2-AS1Q8NCQ2 148 aa6.81□□□□□ -1.32
SEMA4B-204ENST00000558065 TENM2Q9NT68 2774 aa6.8□□□□□ -1.32
SEMA4B-204ENST00000558065 UTP20O75691 2785 aaKnown RBP6.8□□□□□ -1.32
SEMA4B-204ENST00000558065 IGKV2-24A0A0C4DH68 120 aa6.8□□□□□ -1.32
SEMA4B-204ENST00000558065 NBEAL2Q6ZNJ1 2754 aa6.8□□□□□ -1.32
SEMA4B-204ENST00000558065 A8MWP4 228 aa6.79□□□□□ -1.32
SEMA4B-204ENST00000558065 LINC00483Q53H64 154 aa6.79□□□□□ -1.32
SEMA4B-204ENST00000558065 UNC79Q9P2D8 2635 aa6.78□□□□□ -1.32
SEMA4B-204ENST00000558065 LELP1Q5T871 98 aa6.77□□□□□ -1.33
SEMA4B-204ENST00000558065 ITPR2Q14571 2701 aa6.77□□□□□ -1.33
SEMA4B-204ENST00000558065 RPL37AP8A6NKH3 93 aa6.77□□□□□ -1.33
SEMA4B-204ENST00000558065 IGLV5-52A0A0A0MRZ9 124 aa6.76□□□□□ -1.33
SEMA4B-204ENST00000558065 A0A1B0GU69 56 aa6.76□□□□□ -1.33
SEMA4B-204ENST00000558065 UQCR11O14957 56 aa6.76□□□□□ -1.33
SEMA4B-204ENST00000558065 A0A087WSZ3 146 aa6.75□□□□□ -1.33
SEMA4B-204ENST00000558065 MMP24-AS1A0A0U1RRL7 71 aa6.75□□□□□ -1.33
SEMA4B-204ENST00000558065 A8MUU9 505 aa6.75□□□□□ -1.33
SEMA4B-204ENST00000558065 EGFEM1PQ0D2K5 195 aa6.75□□□□□ -1.33
SEMA4B-204ENST00000558065 IGFL1Q6UW32 110 aa6.75□□□□□ -1.33
SEMA4B-204ENST00000558065 Q6ZRX8 168 aa6.75□□□□□ -1.33
SEMA4B-204ENST00000558065 DHRS4-AS1Q9P1J3 65 aa6.75□□□□□ -1.33
SEMA4B-204ENST00000558065 KRTAP4-16G5E9R7 235 aaPredicted RBP6.74□□□□□ -1.33
SEMA4B-204ENST00000558065 SETXQ7Z333 2677 aaKnown RBP6.74□□□□□ -1.33
SEMA4B-204ENST00000558065 CSMD3Q7Z407 3707 aa6.74□□□□□ -1.33
SEMA4B-204ENST00000558065 GIG44P09565 113 aaPredicted RBP6.73□□□□□ -1.33
SEMA4B-204ENST00000558065 NOTCH1P46531 2555 aa6.73□□□□□ -1.33
SEMA4B-204ENST00000558065 LINC00472Q9H8W2 130 aa6.72□□□□□ -1.33
SEMA4B-204ENST00000558065 KRTAP16-1A8MUX0 517 aa6.72□□□□□ -1.33
SEMA4B-204ENST00000558065 CDK2AP2O75956 126 aa6.71□□□□□ -1.34
SEMA4B-204ENST00000558065 FBN2P35556 2912 aa6.71□□□□□ -1.34
SEMA4B-204ENST00000558065 FAM168BA1KXE4 195 aa6.7□□□□□ -1.34
SEMA4B-204ENST00000558065 A0A096LNI7 61 aa6.7□□□□□ -1.34
SEMA4B-204ENST00000558065 STAB1Q9NY15 2570 aa6.69□□□□□ -1.34
SEMA4B-204ENST00000558065 DNAH10OSP0CZ25 163 aa6.68□□□□□ -1.34
SEMA4B-204ENST00000558065 TP53AIP1Q9HCN2 124 aa6.68□□□□□ -1.34
SEMA4B-204ENST00000558065 NBEAL1Q6ZS30 2694 aa6.67□□□□□ -1.34
SEMA4B-204ENST00000558065 COL6A5A8TX70 2615 aa6.67□□□□□ -1.34
SEMA4B-204ENST00000558065 SPRR1AP35321 89 aa6.66□□□□□ -1.34
SEMA4B-204ENST00000558065 NDUFAF8A1L188 74 aa6.65□□□□□ -1.34
SEMA4B-204ENST00000558065 UBE2DNLQ8IWF7 75 aa6.65□□□□□ -1.34
SEMA4B-204ENST00000558065 C20orf166-AS1Q96NR2 134 aa6.65□□□□□ -1.34
SEMA4B-204ENST00000558065 CASC10Q5T4H9 136 aa6.64□□□□□ -1.35
SEMA4B-204ENST00000558065 DMAC1Q96GE9 116 aa6.64□□□□□ -1.35
SEMA4B-204ENST00000558065 IGLV8-61A0A075B6I0 122 aa6.64□□□□□ -1.35
SEMA4B-204ENST00000558065 ACYP2P14621 99 aa6.64□□□□□ -1.35
SEMA4B-204ENST00000558065 LINC00304Q8N9R0 145 aa6.61□□□□□ -1.35
SEMA4B-204ENST00000558065 KRTAP26-1Q6PEX3 210 aa6.6□□□□□ -1.35
SEMA4B-204ENST00000558065 KRTAP1-3Q8IUG1 177 aa6.6□□□□□ -1.35
SEMA4B-204ENST00000558065 MXRA5Q9NR99 2828 aa6.59□□□□□ -1.36
SEMA4B-204ENST00000558065 NIPBLQ6KC79 2804 aaeCLIP6.57□□□□□ -1.36
SEMA4B-204ENST00000558065 IGLV7-43P04211 117 aa6.56□□□□□ -1.36
SEMA4B-204ENST00000558065 K7EIL1 84 aa6.56□□□□□ -1.36
SEMA4B-204ENST00000558065 C15orf56Q8N910 161 aa6.56□□□□□ -1.36
SEMA4B-204ENST00000558065 PRLHP81277 87 aa6.55□□□□□ -1.36
SEMA4B-204ENST00000558065 A0A087WTM6 91 aa6.54□□□□□ -1.36
SEMA4B-204ENST00000558065 NSD1Q96L73 2696 aaPredicted RBP6.53□□□□□ -1.36
SEMA4B-204ENST00000558065 KRTAP15-1Q3LI76 137 aa6.53□□□□□ -1.36
SEMA4B-204ENST00000558065 KRTAP7-1Q8IUC3 87 aa6.53□□□□□ -1.36
SEMA4B-204ENST00000558065 KRTAP10-3P60369 221 aa6.52□□□□□ -1.37
SEMA4B-204ENST00000558065 KRTAP1-1Q07627 177 aa6.52□□□□□ -1.37
SEMA4B-204ENST00000558065 KRTAP13-3Q3SY46 172 aa6.52□□□□□ -1.37
SEMA4B-204ENST00000558065 C8orf17Q9NRJ1 99 aa6.52□□□□□ -1.37
SEMA4B-204ENST00000558065 CRIPTQ9P021 101 aa6.52□□□□□ -1.37
SEMA4B-204ENST00000558065 PLA2G2DQ9UNK4 145 aa6.51□□□□□ -1.37
SEMA4B-204ENST00000558065 Q96NJ1 140 aa6.51□□□□□ -1.37
SEMA4B-204ENST00000558065 NUPR2A6NF83 97 aa6.49□□□□□ -1.37
SEMA4B-204ENST00000558065 HIVEP1P15822 2718 aa6.49□□□□□ -1.37
SEMA4B-204ENST00000558065 Q5W150 140 aa6.49□□□□□ -1.37
SEMA4B-204ENST00000558065 KMT2BQ9UMN6 2715 aaPredicted RBP6.48□□□□□ -1.37
SEMA4B-204ENST00000558065 IGLV9-49A0A0B4J1Y8 123 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms