RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 Q6ZRX8 168 aa7.11□□□□□ -1.27
CCDC85C-207ENST00000557769 LINC00612Q8N6U2 182 aa7.11□□□□□ -1.27
CCDC85C-207ENST00000557769 B9D2Q9BPU9 175 aa7.11□□□□□ -1.27
CCDC85C-207ENST00000557769 IGLV9-49A0A0B4J1Y8 123 aa7.11□□□□□ -1.27
CCDC85C-207ENST00000557769 CASC10Q5T4H9 136 aa7.11□□□□□ -1.27
CCDC85C-207ENST00000557769 NDUFB1O75438 58 aa7.1□□□□□ -1.27
CCDC85C-207ENST00000557769 REG3GQ6UW15 175 aa7.1□□□□□ -1.27
CCDC85C-207ENST00000557769 GVQW2A0A096LPI5 108 aaPredicted RBP7.09□□□□□ -1.27
CCDC85C-207ENST00000557769 Q9BRP9 147 aa7.09□□□□□ -1.27
CCDC85C-207ENST00000557769 SPINK6Q6UWN8 80 aa7.09□□□□□ -1.27
CCDC85C-207ENST00000557769 C4orf48Q5BLP8 95 aa7.08□□□□□ -1.28
CCDC85C-207ENST00000557769 hDV103S1A0JD37 113 aa7.08□□□□□ -1.28
CCDC85C-207ENST00000557769 SPAG11AQ6PDA7 123 aa7.07□□□□□ -1.28
CCDC85C-207ENST00000557769 PRKDCP78527 4128 aaKnown RBP7.06□□□□□ -1.28
CCDC85C-207ENST00000557769 MEGF8Q7Z7M0 2845 aa7.06□□□□□ -1.28
CCDC85C-207ENST00000557769 TENM3Q9P273 2699 aa7.06□□□□□ -1.28
CCDC85C-207ENST00000557769 CHTF8P0CG12 524 aa7.05□□□□□ -1.28
CCDC85C-207ENST00000557769 DSCR10P59022 87 aa7.05□□□□□ -1.28
CCDC85C-207ENST00000557769 KCNQ1DNQ9H478 68 aa7.05□□□□□ -1.28
CCDC85C-207ENST00000557769 A8MU10 97 aa7.03□□□□□ -1.28
CCDC85C-207ENST00000557769 IGHV6-1A0A0B4J1U7 121 aa7.03□□□□□ -1.28
CCDC85C-207ENST00000557769 IGFL1Q6UW32 110 aa7.03□□□□□ -1.28
CCDC85C-207ENST00000557769 RETNLBQ9BQ08 111 aa7.02□□□□□ -1.29
CCDC85C-207ENST00000557769 DNAH9Q9NYC9 4486 aa7.02□□□□□ -1.29
CCDC85C-207ENST00000557769 IGLV1-50A0A075B6I6 118 aa7.01□□□□□ -1.29
CCDC85C-207ENST00000557769 COL7A1Q02388 2944 aa7□□□□□ -1.29
CCDC85C-207ENST00000557769 PHF5AQ7RTV0 110 aaKnown RBP7□□□□□ -1.29
CCDC85C-207ENST00000557769 LINC01556Q5JQF7 62 aa7□□□□□ -1.29
CCDC85C-207ENST00000557769 HUWE1Q7Z6Z7 4374 aaKnown RBP7□□□□□ -1.29
CCDC85C-207ENST00000557769 KRTAP10-11P60412 298 aa6.99□□□□□ -1.29
CCDC85C-207ENST00000557769 H3BS24 57 aa6.99□□□□□ -1.29
CCDC85C-207ENST00000557769 STAB2Q8WWQ8 2551 aa6.99□□□□□ -1.29
CCDC85C-207ENST00000557769 IGLV5-48A0A075B6I7 105 aa6.98□□□□□ -1.29
CCDC85C-207ENST00000557769 LINC00588Q9Y4M8 146 aa6.97□□□□□ -1.29
CCDC85C-207ENST00000557769 COA5Q86WW8 74 aa6.95□□□□□ -1.3
CCDC85C-207ENST00000557769 SRRM2Q9UQ35 2752 aaKnown RBP6.95□□□□□ -1.3
CCDC85C-207ENST00000557769 LIMD2Q9BT23 127 aa6.93□□□□□ -1.3
CCDC85C-207ENST00000557769 DNAH7Q8WXX0 4024 aa6.93□□□□□ -1.3
CCDC85C-207ENST00000557769 CD164Q04900 197 aa6.92□□□□□ -1.3
CCDC85C-207ENST00000557769 Q1T7F1 81 aa6.91□□□□□ -1.3
CCDC85C-207ENST00000557769 PRR15Q8IV56 129 aa6.91□□□□□ -1.3
CCDC85C-207ENST00000557769 ANAPC11Q9NYG5 84 aa6.91□□□□□ -1.3
CCDC85C-207ENST00000557769 FBN3Q75N90 2809 aa6.89□□□□□ -1.31
CCDC85C-207ENST00000557769 KRTAP26-1Q6PEX3 210 aa6.89□□□□□ -1.31
CCDC85C-207ENST00000557769 CSMD3Q7Z407 3707 aa6.88□□□□□ -1.31
CCDC85C-207ENST00000557769 Q5VV11 94 aa6.88□□□□□ -1.31
CCDC85C-207ENST00000557769 K7EIL1 84 aa6.87□□□□□ -1.31
CCDC85C-207ENST00000557769 TENM2Q9NT68 2774 aa6.87□□□□□ -1.31
CCDC85C-207ENST00000557769 SPRR4Q96PI1 79 aa6.87□□□□□ -1.31
CCDC85C-207ENST00000557769 A8MWP4 228 aa6.86□□□□□ -1.31
CCDC85C-207ENST00000557769 DYNC2H1Q8NCM8 4307 aaKnown RBP6.86□□□□□ -1.31
CCDC85C-207ENST00000557769 C16orf90A8MZG2 172 aa6.86□□□□□ -1.31
CCDC85C-207ENST00000557769 DNAH10OSP0CZ25 163 aa6.86□□□□□ -1.31
CCDC85C-207ENST00000557769 Q8N9P0 234 aaPredicted RBP6.86□□□□□ -1.31
CCDC85C-207ENST00000557769 CIRBP-AS1Q8TBR5 109 aa6.86□□□□□ -1.31
CCDC85C-207ENST00000557769 MOBPQ13875 183 aa6.85□□□□□ -1.31
CCDC85C-207ENST00000557769 A0A1B0GW54 56 aa6.85□□□□□ -1.31
CCDC85C-207ENST00000557769 RBM12B-AS1Q9P1G2 102 aa6.85□□□□□ -1.31
CCDC85C-207ENST00000557769 IGLV8-61A0A075B6I0 122 aa6.84□□□□□ -1.31
CCDC85C-207ENST00000557769 PRR26Q8N8Z3 221 aa6.84□□□□□ -1.31
CCDC85C-207ENST00000557769 H3BNG1 76 aa6.84□□□□□ -1.32
CCDC85C-207ENST00000557769 CNBPP62633 177 aaKnown RBP6.84□□□□□ -1.32
CCDC85C-207ENST00000557769 SPINK1P00995 79 aa6.82□□□□□ -1.32
CCDC85C-207ENST00000557769 CYP4F30PQ9H0H9 118 aa6.82□□□□□ -1.32
CCDC85C-207ENST00000557769 LOC101927531A0A1B0GV80 90 aa6.82□□□□□ -1.32
CCDC85C-207ENST00000557769 LYSTQ99698 3801 aa6.81□□□□□ -1.32
CCDC85C-207ENST00000557769 TNP2Q05952 138 aa6.81□□□□□ -1.32
CCDC85C-207ENST00000557769 KTN1-AS1Q86SY8 53 aa6.81□□□□□ -1.32
CCDC85C-207ENST00000557769 ZCCHC13Q8WW36 166 aaKnown RBP6.81□□□□□ -1.32
CCDC85C-207ENST00000557769 KRTAP7-1Q8IUC3 87 aa6.79□□□□□ -1.32
CCDC85C-207ENST00000557769 TLX1NBP0CAT3 122 aa6.79□□□□□ -1.32
CCDC85C-207ENST00000557769 STARD9Q9P2P6 4700 aa6.79□□□□□ -1.32
CCDC85C-207ENST00000557769 SPRR1AP35321 89 aa6.78□□□□□ -1.32
CCDC85C-207ENST00000557769 PRAC1Q96KF2 57 aa6.78□□□□□ -1.32
CCDC85C-207ENST00000557769 C14orf177Q52M58 125 aa6.78□□□□□ -1.32
CCDC85C-207ENST00000557769 KRTAP4-16G5E9R7 235 aaPredicted RBP6.78□□□□□ -1.32
CCDC85C-207ENST00000557769 DMBT1Q9UGM3 2413 aaPredicted RBP6.77□□□□□ -1.32
CCDC85C-207ENST00000557769 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
CCDC85C-207ENST00000557769 SPINK7P58062 85 aa6.77□□□□□ -1.33
CCDC85C-207ENST00000557769 LCA10Q71F78 164 aa6.76□□□□□ -1.33
CCDC85C-207ENST00000557769 C8orf17Q9NRJ1 99 aa6.76□□□□□ -1.33
CCDC85C-207ENST00000557769 PLA2G2DQ9UNK4 145 aa6.76□□□□□ -1.33
CCDC85C-207ENST00000557769 H3BPC8 53 aa6.75□□□□□ -1.33
CCDC85C-207ENST00000557769 DNAH1Q9P2D7 4330 aa6.74□□□□□ -1.33
CCDC85C-207ENST00000557769 PLECQ15149 4684 aaKnown RBP6.74□□□□□ -1.33
CCDC85C-207ENST00000557769 IGKV2D-30A0A075B6S6 120 aa6.74□□□□□ -1.33
CCDC85C-207ENST00000557769 IGKV2-30P06310 120 aa6.74□□□□□ -1.33
CCDC85C-207ENST00000557769 TGP01266 2768 aa6.73□□□□□ -1.33
CCDC85C-207ENST00000557769 KRTAP11-1Q8IUC1 163 aa6.73□□□□□ -1.33
CCDC85C-207ENST00000557769 SPANXA2-OT1Q8N9U9 137 aa6.72□□□□□ -1.33
CCDC85C-207ENST00000557769 MMP24-AS1A0A0U1RRL7 71 aa6.72□□□□□ -1.33
CCDC85C-207ENST00000557769 KRTAP1-5Q9BYS1 174 aa6.72□□□□□ -1.33
CCDC85C-207ENST00000557769 IGLV5-37A0A075B6J1 123 aa6.71□□□□□ -1.33
CCDC85C-207ENST00000557769 A0A1B0GU69 56 aa6.71□□□□□ -1.33
CCDC85C-207ENST00000557769 MRPL34Q9BQ48 92 aaKnown RBP6.71□□□□□ -1.34
CCDC85C-207ENST00000557769 TP53AIP1Q9HCN2 124 aa6.71□□□□□ -1.34
CCDC85C-207ENST00000557769 FLG2Q5D862 2391 aaPredicted RBP6.71□□□□□ -1.34
CCDC85C-207ENST00000557769 CDC42SE1Q9NRR8 79 aa6.7□□□□□ -1.34
CCDC85C-207ENST00000557769 LINC00472Q9H8W2 130 aa6.7□□□□□ -1.34
CCDC85C-207ENST00000557769 C7orf65Q6ZTY9 151 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms