RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 PRLHP81277 87 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 NMSQ5H8A3 153 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 RPL13AP3Q6NVV1 102 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 MUSTN1Q8IVN3 82 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 UBE2D4Q9Y2X8 147 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 RAPGEF2Q9Y4G8 1499 aa-0.62□□□□□ -2.51
FOXN3-216ENST00000557496 ATMQ13315 3056 aa-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 ZFYVE16Q7Z3T8 1539 aa-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 TMEM218A2RU14 115 aa-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 LEPROTL1O95214 131 aa-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 HMGN1P05114 100 aa-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 UQCRHP07919 91 aa-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 DEFB130BP0DP73 79 aa-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 DEFB130AP0DP74 79 aa-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 S100A12P80511 92 aa-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 COX6B2Q6YFQ2 88 aa-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 TMEM203Q969S6 136 aa-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 PMCHL2Q9BQD1 86 aa-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 AP4S1Q9Y587 144 aa-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 CLTCQ00610 1675 aaKnown RBP-0.63□□□□□ -2.51
FOXN3-216ENST00000557496 NWD1Q149M9 1564 aa-0.64□□□□□ -2.51
FOXN3-216ENST00000557496 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.64□□□□□ -2.51
FOXN3-216ENST00000557496 LRRC9Q6ZRR7 1453 aa-0.64□□□□□ -2.51
FOXN3-216ENST00000557496 ETDBQ3ZM63 59 aa-0.64□□□□□ -2.51
FOXN3-216ENST00000557496 SERP2Q8N6R1 65 aa-0.64□□□□□ -2.51
FOXN3-216ENST00000557496 C2orf88Q9BSF0 95 aa-0.64□□□□□ -2.51
FOXN3-216ENST00000557496 PRO3102Q9H379 93 aa-0.64□□□□□ -2.51
FOXN3-216ENST00000557496 TLN1Q9Y490 2541 aaKnown RBP-0.64□□□□□ -2.51
FOXN3-216ENST00000557496 TMEM131LA2VDJ0 1609 aa-0.64□□□□□ -2.51
FOXN3-216ENST00000557496 NEXMIFQ5QGS0 1516 aa-0.64□□□□□ -2.51
FOXN3-216ENST00000557496 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.65□□□□□ -2.51
FOXN3-216ENST00000557496 TRAV21A0A0B4J279 112 aa-0.65□□□□□ -2.51
FOXN3-216ENST00000557496 IQCF6A8MYZ5 107 aa-0.65□□□□□ -2.51
FOXN3-216ENST00000557496 NDUFC1O43677 76 aa-0.65□□□□□ -2.51
FOXN3-216ENST00000557496 MPC2O95563 127 aa-0.65□□□□□ -2.51
FOXN3-216ENST00000557496 GAFA1Q96PS6 74 aa-0.65□□□□□ -2.51
FOXN3-216ENST00000557496 GNG8Q9UK08 70 aa-0.65□□□□□ -2.51
FOXN3-216ENST00000557496 ABCC2Q92887 1545 aa-0.65□□□□□ -2.51
FOXN3-216ENST00000557496 ARFGEF2Q9Y6D5 1785 aa-0.65□□□□□ -2.51
FOXN3-216ENST00000557496 EIF4G3O43432 1585 aaKnown RBP-0.66□□□□□ -2.51
FOXN3-216ENST00000557496 ATP7BP35670 1465 aa-0.66□□□□□ -2.51
FOXN3-216ENST00000557496 TJP1Q07157 1748 aa-0.66□□□□□ -2.51
FOXN3-216ENST00000557496 DDX60LQ5H9U9 1706 aaKnown RBP-0.66□□□□□ -2.51
FOXN3-216ENST00000557496 LYNX1G3V0Z9 82 aa-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 K7EP34 96 aa-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 ATOX1O00244 68 aa-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 MT1EP04732 61 aa-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 C3orf79P0CE67 100 aa-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 MT1GP13640 62 aa-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 FAUP35544 74 aaKnown RBP-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 S100A10P60903 97 aa-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 HMGN3Q15651 99 aa-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 KRTAP19-6Q3LI70 58 aa-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 COL5A1-AS1Q5SY13 56 aa-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 ALKAL2Q6UX46 152 aa-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 GTF2H5Q6ZYL4 71 aa-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 DEFB106AQ8N104 65 aa-0.66□□□□□ -2.52
FOXN3-216ENST00000557496 CDC42BPAQ5VT25 1732 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 PARP4Q9UKK3 1724 aaKnown RBP-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 ANKRD26Q9UPS8 1709 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 DEPDC5O75140 1603 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 PLCH1Q4KWH8 1693 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 LCE6AA0A183 80 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 A0A1B0GUT8 65 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 IAPPP10997 89 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 MRPS10P82664 201 aaKnown RBP-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 ZNF720Q7Z2F6 126 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 KRTAP8-1Q8IUC2 63 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 MT1LQ93083 61 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 C14orf144Q96I85 54 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 C20orf78Q9BR46 151 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 CSMD2Q7Z408 3487 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 TOGARAM1Q9Y4F4 1720 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 NCOA2Q15596 1464 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 TEX14Q8IWB6 1497 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 MYO3AQ8NEV4 1616 aa-0.67□□□□□ -2.52
FOXN3-216ENST00000557496 CRYBG3Q68DQ2 2970 aa-0.68□□□□□ -2.52
FOXN3-216ENST00000557496 UQCRHLA0A096LP55 91 aa-0.68□□□□□ -2.52
FOXN3-216ENST00000557496 C20orf202A1L168 122 aa-0.68□□□□□ -2.52
FOXN3-216ENST00000557496 EFCAB10A6NFE3 127 aa-0.68□□□□□ -2.52
FOXN3-216ENST00000557496 HMGN2P05204 90 aaKnown RBP-0.68□□□□□ -2.52
FOXN3-216ENST00000557496 MT1HL1P0DM35 61 aa-0.68□□□□□ -2.52
FOXN3-216ENST00000557496 ITSN1Q15811 1721 aa-0.68□□□□□ -2.52
FOXN3-216ENST00000557496 NCMAPQ5T1S8 102 aa-0.68□□□□□ -2.52
FOXN3-216ENST00000557496 WFDC9Q8NEX5 89 aa-0.68□□□□□ -2.52
FOXN3-216ENST00000557496 DIP2BQ9P265 1576 aa-0.68□□□□□ -2.52
FOXN3-216ENST00000557496 AKAP12Q02952 1782 aa-0.68□□□□□ -2.52
FOXN3-216ENST00000557496 CFAP54Q96N23 3096 aa-0.68□□□□□ -2.52
FOXN3-216ENST00000557496 ITSN2Q9NZM3 1697 aa-0.69□□□□□ -2.52
FOXN3-216ENST00000557496 MAGI3Q5TCQ9 1506 aa-0.69□□□□□ -2.52
FOXN3-216ENST00000557496 LY75O60449 1722 aa-0.69□□□□□ -2.52
FOXN3-216ENST00000557496 ATP6V1G2-DDX39BF2Z307 99 aa-0.69□□□□□ -2.52
FOXN3-216ENST00000557496 ACYP1P07311 99 aa-0.69□□□□□ -2.52
FOXN3-216ENST00000557496 IFI6P09912 130 aa-0.69□□□□□ -2.52
FOXN3-216ENST00000557496 RPL38P63173 70 aaKnown RBP-0.69□□□□□ -2.52
FOXN3-216ENST00000557496 PLGLAQ15195 96 aa-0.69□□□□□ -2.52
FOXN3-216ENST00000557496 FANCAO15360 1455 aa-0.69□□□□□ -2.52
FOXN3-216ENST00000557496 ATP10BO94823 1461 aa-0.69□□□□□ -2.52
FOXN3-216ENST00000557496 FYCO1Q9BQS8 1478 aa-0.69□□□□□ -2.52
FOXN3-216ENST00000557496 ZC3H13Q5T200 1668 aaKnown RBP-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms