RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 TEN1Q86WV5 123 aa6.55□□□□□ -1.36
TGFB3-207ENST00000557493 SMCR5Q8TEV8 140 aa6.55□□□□□ -1.36
TGFB3-207ENST00000557493 PPDPFLQ8WWR9 84 aa6.55□□□□□ -1.36
TGFB3-207ENST00000557493 C1orf137Q5JT78 98 aa6.54□□□□□ -1.36
TGFB3-207ENST00000557493 HIGD2AQ9BW72 106 aa6.54□□□□□ -1.36
TGFB3-207ENST00000557493 RNF213Q63HN8 5207 aa6.53□□□□□ -1.36
TGFB3-207ENST00000557493 LRP1Q07954 4544 aaKnown RBP6.53□□□□□ -1.36
TGFB3-207ENST00000557493 ETDBQ3ZM63 59 aa6.53□□□□□ -1.36
TGFB3-207ENST00000557493 KRTAP13-1Q8IUC0 172 aa6.53□□□□□ -1.36
TGFB3-207ENST00000557493 HAMPP81172 84 aa6.52□□□□□ -1.37
TGFB3-207ENST00000557493 IGLV5-48A0A075B6I7 105 aa6.51□□□□□ -1.37
TGFB3-207ENST00000557493 ERC2-IT1O76042 136 aa6.51□□□□□ -1.37
TGFB3-207ENST00000557493 FAT3Q8TDW7 4589 aa6.51□□□□□ -1.37
TGFB3-207ENST00000557493 JMJD7-PLA2G4BH0Y9G9 81 aa6.5□□□□□ -1.37
TGFB3-207ENST00000557493 ZNF861PO60384 105 aa6.5□□□□□ -1.37
TGFB3-207ENST00000557493 PLA2G1BP04054 148 aaKnown RBP6.5□□□□□ -1.37
TGFB3-207ENST00000557493 IGLV7-43P04211 117 aa6.5□□□□□ -1.37
TGFB3-207ENST00000557493 ZNF706Q9Y5V0 76 aaPredicted RBP6.5□□□□□ -1.37
TGFB3-207ENST00000557493 TEX49A0A1B0GTD5 131 aa6.49□□□□□ -1.37
TGFB3-207ENST00000557493 ST20-AS1Q8NBB2 130 aa6.49□□□□□ -1.37
TGFB3-207ENST00000557493 DEFB105AQ8NG35 78 aa6.49□□□□□ -1.37
TGFB3-207ENST00000557493 LAMTOR3Q9UHA4 124 aa6.49□□□□□ -1.37
TGFB3-207ENST00000557493 J3QR89 54 aa6.48□□□□□ -1.37
TGFB3-207ENST00000557493 LINC01547P58512 204 aaPredicted RBP6.48□□□□□ -1.37
TGFB3-207ENST00000557493 NDUFV3P56181 108 aaKnown RBP6.47□□□□□ -1.37
TGFB3-207ENST00000557493 Q8N377 158 aa6.47□□□□□ -1.37
TGFB3-207ENST00000557493 SPRR1BP22528 89 aa6.46□□□□□ -1.38
TGFB3-207ENST00000557493 RPL37AP61513 92 aaKnown RBP6.46□□□□□ -1.38
TGFB3-207ENST00000557493 OBSCN-AS1Q96MR7 158 aa6.46□□□□□ -1.38
TGFB3-207ENST00000557493 F8WEM9 126 aa6.45□□□□□ -1.38
TGFB3-207ENST00000557493 K7ERU9 68 aa6.45□□□□□ -1.38
TGFB3-207ENST00000557493 C21orf62-AS1Q17RA5 79 aa6.45□□□□□ -1.38
TGFB3-207ENST00000557493 PKHD1L1Q86WI1 4243 aa6.45□□□□□ -1.38
TGFB3-207ENST00000557493 OXTP01178 125 aa6.44□□□□□ -1.38
TGFB3-207ENST00000557493 RBM3P98179 157 aaKnown RBP6.44□□□□□ -1.38
TGFB3-207ENST00000557493 GAGE2AQ6NT46 116 aa6.44□□□□□ -1.38
TGFB3-207ENST00000557493 SPRR4Q96PI1 79 aa6.44□□□□□ -1.38
TGFB3-207ENST00000557493 LRP2P98164 4655 aa6.43□□□□□ -1.38
TGFB3-207ENST00000557493 A0A1B0GV72 72 aa6.43□□□□□ -1.38
TGFB3-207ENST00000557493 PDE6GP18545 87 aa6.43□□□□□ -1.38
TGFB3-207ENST00000557493 DSCR8Q96T75 97 aa6.43□□□□□ -1.38
TGFB3-207ENST00000557493 C14orf132Q9NPU4 83 aa6.43□□□□□ -1.38
TGFB3-207ENST00000557493 LINC00483Q53H64 154 aa6.42□□□□□ -1.38
TGFB3-207ENST00000557493 LOC110117498A0A087WWA1 95 aa6.41□□□□□ -1.38
TGFB3-207ENST00000557493 SMIM29Q86T20 159 aa6.41□□□□□ -1.38
TGFB3-207ENST00000557493 C3orf22Q8N5N4 141 aa6.41□□□□□ -1.38
TGFB3-207ENST00000557493 TRBV7-4A0A0J9YYF1 115 aa6.4□□□□□ -1.38
TGFB3-207ENST00000557493 FAM240AA0A1B0GVK7 77 aa6.39□□□□□ -1.39
TGFB3-207ENST00000557493 IGLV8-61A0A075B6I0 122 aa6.38□□□□□ -1.39
TGFB3-207ENST00000557493 CCKP06307 115 aa6.38□□□□□ -1.39
TGFB3-207ENST00000557493 ACYP1P07311 99 aa6.38□□□□□ -1.39
TGFB3-207ENST00000557493 SPINK6Q6UWN8 80 aa6.38□□□□□ -1.39
TGFB3-207ENST00000557493 Q6ZQT0 140 aa6.38□□□□□ -1.39
TGFB3-207ENST00000557493 Q6JHZ5 121 aa6.37□□□□□ -1.39
TGFB3-207ENST00000557493 C9orf153Q5TBE3 101 aa6.36□□□□□ -1.39
TGFB3-207ENST00000557493 FAM229BQ4G0N7 80 aa6.35□□□□□ -1.39
TGFB3-207ENST00000557493 Q8NBF4 154 aa6.35□□□□□ -1.39
TGFB3-207ENST00000557493 IGLV9-49A0A0B4J1Y8 123 aa6.34□□□□□ -1.39
TGFB3-207ENST00000557493 VPS25Q9BRG1 176 aa6.34□□□□□ -1.39
TGFB3-207ENST00000557493 TNXBP22105 4242 aa6.34□□□□□ -1.39
TGFB3-207ENST00000557493 A0A1B0GW54 56 aa6.33□□□□□ -1.4
TGFB3-207ENST00000557493 KRTAP10-4P60372 401 aaPredicted RBP6.33□□□□□ -1.4
TGFB3-207ENST00000557493 IGFL1Q6UW32 110 aa6.33□□□□□ -1.4
TGFB3-207ENST00000557493 MOBPQ13875 183 aa6.32□□□□□ -1.4
TGFB3-207ENST00000557493 ANAPC11Q9NYG5 84 aa6.31□□□□□ -1.4
TGFB3-207ENST00000557493 A0A1W2PNM2 257 aa6.3□□□□□ -1.4
TGFB3-207ENST00000557493 KRTAP1-4P0C5Y4 121 aa6.3□□□□□ -1.4
TGFB3-207ENST00000557493 CRYGAP11844 174 aa6.3□□□□□ -1.4
TGFB3-207ENST00000557493 Q6Q795 121 aa6.29□□□□□ -1.4
TGFB3-207ENST00000557493 SSBP3-AS1Q7Z2R9 100 aa6.29□□□□□ -1.4
TGFB3-207ENST00000557493 UBL5Q9BZL1 73 aa6.28□□□□□ -1.4
TGFB3-207ENST00000557493 LINC00846Q9NV44 126 aa6.28□□□□□ -1.4
TGFB3-207ENST00000557493 A0A087X002 238 aa6.27□□□□□ -1.41
TGFB3-207ENST00000557493 CDIP1Q9H305 208 aa6.27□□□□□ -1.41
TGFB3-207ENST00000557493 MT1HL1P0DM35 61 aa6.26□□□□□ -1.41
TGFB3-207ENST00000557493 A0A0G2JQZ4 141 aa6.25□□□□□ -1.41
TGFB3-207ENST00000557493 KRTAP13-2Q52LG2 175 aa6.25□□□□□ -1.41
TGFB3-207ENST00000557493 LINC00643Q86TS7 51 aa6.25□□□□□ -1.41
TGFB3-207ENST00000557493 KRTAP9-2Q9BYQ4 174 aa6.25□□□□□ -1.41
TGFB3-207ENST00000557493 TRBV7-7A0A0K0K1E9 115 aa6.24□□□□□ -1.41
TGFB3-207ENST00000557493 CD164Q04900 197 aa6.24□□□□□ -1.41
TGFB3-207ENST00000557493 A0A087WSZ3 146 aa6.23□□□□□ -1.41
TGFB3-207ENST00000557493 ATP5EP2Q5VTU8 51 aa6.23□□□□□ -1.41
TGFB3-207ENST00000557493 Q6ZVQ6 151 aa6.23□□□□□ -1.41
TGFB3-207ENST00000557493 TYMSOSQ8TAI1 123 aa6.23□□□□□ -1.41
TGFB3-207ENST00000557493 SS18L2Q9UHA2 77 aa6.23□□□□□ -1.41
TGFB3-207ENST00000557493 NREPQ16612 68 aa6.22□□□□□ -1.41
TGFB3-207ENST00000557493 PRR26Q8N8Z3 221 aa6.21□□□□□ -1.42
TGFB3-207ENST00000557493 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
TGFB3-207ENST00000557493 HRCT1Q6UXD1 115 aa6.2□□□□□ -1.42
TGFB3-207ENST00000557493 SIGMAR1Q99720 223 aa6.18□□□□□ -1.42
TGFB3-207ENST00000557493 LIMD2Q9BT23 127 aa6.18□□□□□ -1.42
TGFB3-207ENST00000557493 BPY2O14599 106 aa6.17□□□□□ -1.42
TGFB3-207ENST00000557493 MT-ATP8P03928 68 aa6.17□□□□□ -1.42
TGFB3-207ENST00000557493 CXCL6P80162 114 aa6.17□□□□□ -1.42
TGFB3-207ENST00000557493 SPAG11AQ6PDA7 123 aa6.17□□□□□ -1.42
TGFB3-207ENST00000557493 LINC00304Q8N9R0 145 aa6.17□□□□□ -1.42
TGFB3-207ENST00000557493 FAT4Q6V0I7 4981 aa6.16□□□□□ -1.42
TGFB3-207ENST00000557493 SVIPQ8NHG7 77 aa6.16□□□□□ -1.42
TGFB3-207ENST00000557493 IGKV3D-7A0A0C4DH55 119 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms