RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 UBL5Q9BZL1 73 aa2.38□□□□□ -2.03
PRPF39-212ENST00000557477 TMEM14BQ9NUH8 114 aa2.38□□□□□ -2.03
PRPF39-212ENST00000557477 RYR2Q92736 4967 aa2.38□□□□□ -2.03
PRPF39-212ENST00000557477 PPP1R17O96001 155 aa2.37□□□□□ -2.03
PRPF39-212ENST00000557477 IGLV3-1P01715 115 aa2.37□□□□□ -2.03
PRPF39-212ENST00000557477 PRB4P10163 310 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-212ENST00000557477 ENHOQ6UWT2 76 aa2.37□□□□□ -2.03
PRPF39-212ENST00000557477 LINC00304Q8N9R0 145 aa2.37□□□□□ -2.03
PRPF39-212ENST00000557477 OBSCN-AS1Q96MR7 158 aa2.37□□□□□ -2.03
PRPF39-212ENST00000557477 WFDC10AQ9H1F0 79 aa2.37□□□□□ -2.03
PRPF39-212ENST00000557477 TMEM14CQ9P0S9 112 aa2.37□□□□□ -2.03
PRPF39-212ENST00000557477 DNAH9Q9NYC9 4486 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 TRBV6-8A0A0A6YYG3 113 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 TRAV12-3A0A0B4J271 114 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 IGKV1-12A0A0C4DH73 117 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 A0A1B0GW54 56 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 PSCAO43653 123 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 IGKV1D-12P01611 117 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 IGLV1-51P01701 117 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 APELAP0DMC3 54 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 NREPQ16612 68 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 DEFB135Q30KP9 77 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 PIGYQ3MUY2 71 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 LYZL1Q6UWQ5 148 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 ZNF833PQ6ZTB9 187 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 UBE2DNLQ8IWF7 75 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 AMELXQ99217 191 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 RETNLBQ9BQ08 111 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 DYNC2H1Q8NCM8 4307 aaKnown RBP2.36□□□□□ -2.03
PRPF39-212ENST00000557477 DNAH3Q8TD57 4116 aa2.36□□□□□ -2.03
PRPF39-212ENST00000557477 A6NED7 52 aa2.35□□□□□ -2.03
PRPF39-212ENST00000557477 RPL27AP46776 148 aaKnown RBP2.35□□□□□ -2.03
PRPF39-212ENST00000557477 TSPEAR-AS2P59090 65 aa2.35□□□□□ -2.03
PRPF39-212ENST00000557477 MIAQ16674 131 aa2.35□□□□□ -2.03
PRPF39-212ENST00000557477 CASC2Q6XLA1 102 aa2.35□□□□□ -2.03
PRPF39-212ENST00000557477 C14orf132Q9NPU4 83 aa2.35□□□□□ -2.03
PRPF39-212ENST00000557477 C22orf24Q9Y442 160 aa2.35□□□□□ -2.03
PRPF39-212ENST00000557477 JMJD7-PLA2G4BH0Y9G9 81 aa2.34□□□□□ -2.03
PRPF39-212ENST00000557477 M0R2N4 97 aa2.34□□□□□ -2.03
PRPF39-212ENST00000557477 SAA2P0DJI9 122 aaPredicted RBP2.34□□□□□ -2.03
PRPF39-212ENST00000557477 C10orf113Q5VZT2 155 aa2.34□□□□□ -2.03
PRPF39-212ENST00000557477 SMIM2Q9BVW6 85 aa2.34□□□□□ -2.03
PRPF39-212ENST00000557477 CNFNQ9BYD5 112 aa2.34□□□□□ -2.03
PRPF39-212ENST00000557477 CDC42SE2Q9NRR3 84 aa2.34□□□□□ -2.03
PRPF39-212ENST00000557477 TRAV10A0A0B4J240 114 aa2.33□□□□□ -2.04
PRPF39-212ENST00000557477 TRAV21A0A0B4J279 112 aa2.33□□□□□ -2.04
PRPF39-212ENST00000557477 RPL39P5Q59GN2 51 aa2.33□□□□□ -2.04
PRPF39-212ENST00000557477 SPINK9Q5DT21 86 aa2.33□□□□□ -2.04
PRPF39-212ENST00000557477 PRR15LQ9BU68 103 aa2.33□□□□□ -2.04
PRPF39-212ENST00000557477 MRPL36Q9P0J6 103 aaKnown RBP2.33□□□□□ -2.04
PRPF39-212ENST00000557477 SACSQ9NZJ4 4579 aa2.33□□□□□ -2.04
PRPF39-212ENST00000557477 CSMD3Q7Z407 3707 aa2.33□□□□□ -2.04
PRPF39-212ENST00000557477 ALMS1Q8TCU4 4167 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 LOC101927531A0A1B0GV80 90 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 H3BUA1 57 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 DEFB4AO15263 64 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 CGB3P0DN86 165 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 CGB7P0DN87 165 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 PDE6HQ13956 83 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 ADM2Q7Z4H4 148 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 Q8N814 137 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 USMG5Q96IX5 58 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 LYSTQ99698 3801 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 XAGE1AQ9HD64 81 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 DNAH1Q9P2D7 4330 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 HUWE1Q7Z6Z7 4374 aaKnown RBP2.32□□□□□ -2.04
PRPF39-212ENST00000557477 STARD9Q9P2P6 4700 aa2.32□□□□□ -2.04
PRPF39-212ENST00000557477 IGKV3-7A0A075B6H7 116 aa2.31□□□□□ -2.04
PRPF39-212ENST00000557477 IGKV1OR2-108A0A075B7D4 117 aa2.31□□□□□ -2.04
PRPF39-212ENST00000557477 H0YGX0 51 aa2.31□□□□□ -2.04
PRPF39-212ENST00000557477 CTSGP08311 255 aa2.31□□□□□ -2.04
PRPF39-212ENST00000557477 ELOF1P60002 83 aaKnown RBP2.31□□□□□ -2.04
PRPF39-212ENST00000557477 DEFB114Q30KQ6 69 aa2.31□□□□□ -2.04
PRPF39-212ENST00000557477 ORMDL1Q9P0S3 153 aa2.31□□□□□ -2.04
PRPF39-212ENST00000557477 R4GN34 69 aa2.31□□□□□ -2.04
PRPF39-212ENST00000557477 HYDINQ4G0P3 5121 aa2.31□□□□□ -2.04
PRPF39-212ENST00000557477 DNAH7Q8WXX0 4024 aa2.31□□□□□ -2.04
PRPF39-212ENST00000557477 A0A1W2PNN7 141 aa2.3□□□□□ -2.04
PRPF39-212ENST00000557477 NDUFB1O75438 58 aa2.3□□□□□ -2.04
PRPF39-212ENST00000557477 HTN3P15516 51 aa2.3□□□□□ -2.04
PRPF39-212ENST00000557477 Q9BRP9 147 aa2.3□□□□□ -2.04
PRPF39-212ENST00000557477 LINC00467Q9BRT7 94 aa2.3□□□□□ -2.04
PRPF39-212ENST00000557477 NDUFA4L2Q9NRX3 87 aa2.3□□□□□ -2.04
PRPF39-212ENST00000557477 SORL1Q92673 2214 aa2.3□□□□□ -2.04
PRPF39-212ENST00000557477 DSCAML1Q8TD84 2053 aa2.29□□□□□ -2.04
PRPF39-212ENST00000557477 PCLOQ9Y6V0 5065 aa2.29□□□□□ -2.04
PRPF39-212ENST00000557477 TRBV6-5A0A0K0K1A5 114 aa2.29□□□□□ -2.04
PRPF39-212ENST00000557477 HRES1P13985 223 aa2.29□□□□□ -2.04
PRPF39-212ENST00000557477 CRIP1P50238 77 aa2.29□□□□□ -2.04
PRPF39-212ENST00000557477 C10orf55Q5SWW7 151 aa2.29□□□□□ -2.04
PRPF39-212ENST00000557477 C1orf134Q5TEV5 83 aa2.29□□□□□ -2.04
PRPF39-212ENST00000557477 FAM74A4Q5TZK3 123 aa2.29□□□□□ -2.04
PRPF39-212ENST00000557477 ZNF625Q96I27 306 aaPredicted RBP2.29□□□□□ -2.04
PRPF39-212ENST00000557477 DEFB131BA0A096LNP1 70 aa2.28□□□□□ -2.04
PRPF39-212ENST00000557477 IGKV2-24A0A0C4DH68 120 aa2.28□□□□□ -2.04
PRPF39-212ENST00000557477 TRBV10-1A0A0K0K1A3 114 aa2.28□□□□□ -2.04
PRPF39-212ENST00000557477 H3BQ85 93 aa2.28□□□□□ -2.04
PRPF39-212ENST00000557477 NCR3O14931 201 aa2.28□□□□□ -2.04
PRPF39-212ENST00000557477 CRPP02741 224 aa2.28□□□□□ -2.04
PRPF39-212ENST00000557477 IGHV3-30-3P0DP02 117 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms