RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 A6NJY4 79 aa6.13□□□□□ -1.43
PSEN1-221ENST00000557293 SERF1AO75920 110 aa6.13□□□□□ -1.43
PSEN1-221ENST00000557293 FABP4P15090 132 aa6.13□□□□□ -1.43
PSEN1-221ENST00000557293 FAM236DA0A1B0GTK5 79 aa6.12□□□□□ -1.43
PSEN1-221ENST00000557293 FAM236CP0DP71 79 aa6.12□□□□□ -1.43
PSEN1-221ENST00000557293 Q6JHZ5 121 aa6.12□□□□□ -1.43
PSEN1-221ENST00000557293 TTTY13Q9BZ97 58 aa6.12□□□□□ -1.43
PSEN1-221ENST00000557293 NEBP20929 6669 aa6.12□□□□□ -1.43
PSEN1-221ENST00000557293 CLEC2BQ92478 149 aa6.11□□□□□ -1.43
PSEN1-221ENST00000557293 A4D1N5 150 aa6.1□□□□□ -1.43
PSEN1-221ENST00000557293 HSPB8Q9UJY1 196 aa6.1□□□□□ -1.43
PSEN1-221ENST00000557293 LOC105371267A0A1B0GV96 52 aa6.09□□□□□ -1.43
PSEN1-221ENST00000557293 F8WEM9 126 aa6.09□□□□□ -1.43
PSEN1-221ENST00000557293 LST1O00453 97 aa6.09□□□□□ -1.43
PSEN1-221ENST00000557293 OCIAD2Q56VL3 154 aa6.09□□□□□ -1.43
PSEN1-221ENST00000557293 TRGC2P03986 189 aa6.08□□□□□ -1.44
PSEN1-221ENST00000557293 NOTCH2NLQ7Z3S9 236 aa6.08□□□□□ -1.44
PSEN1-221ENST00000557293 A6NDN8 102 aa6.07□□□□□ -1.44
PSEN1-221ENST00000557293 ZNF815PA8K554 130 aa6.07□□□□□ -1.44
PSEN1-221ENST00000557293 HIST1H2BKO60814 126 aa6.07□□□□□ -1.44
PSEN1-221ENST00000557293 HIST1H2BJP06899 126 aa6.07□□□□□ -1.44
PSEN1-221ENST00000557293 HIST1H2BOP23527 126 aa6.07□□□□□ -1.44
PSEN1-221ENST00000557293 HIST1H2BBP33778 126 aa6.07□□□□□ -1.44
PSEN1-221ENST00000557293 HIST1H2BDP58876 126 aa6.07□□□□□ -1.44
PSEN1-221ENST00000557293 HIST1H2BCP62807 126 aa6.07□□□□□ -1.44
PSEN1-221ENST00000557293 HIST2H2BEQ16778 126 aa6.07□□□□□ -1.44
PSEN1-221ENST00000557293 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.07□□□□□ -1.44
PSEN1-221ENST00000557293 SMIM11BQ8TCY0 68 aa6.07□□□□□ -1.44
PSEN1-221ENST00000557293 HIST1H2BHQ93079 126 aa6.07□□□□□ -1.44
PSEN1-221ENST00000557293 HIST1H2BNQ99877 126 aa6.07□□□□□ -1.44
PSEN1-221ENST00000557293 HIST1H2BMQ99879 126 aa6.07□□□□□ -1.44
PSEN1-221ENST00000557293 NHP2Q9NX24 153 aaKnown RBP6.07□□□□□ -1.44
PSEN1-221ENST00000557293 TMA7Q9Y2S6 64 aaKnown RBP6.07□□□□□ -1.44
PSEN1-221ENST00000557293 KRTAP20-1Q3LI63 56 aa6.06□□□□□ -1.44
PSEN1-221ENST00000557293 COA6Q5JTJ3 125 aaKnown RBP6.06□□□□□ -1.44
PSEN1-221ENST00000557293 LINC00575Q6W349 94 aa6.05□□□□□ -1.44
PSEN1-221ENST00000557293 RBM12B-AS1Q9P1G2 102 aa6.05□□□□□ -1.44
PSEN1-221ENST00000557293 TRAV13-2A0A0B4J235 113 aa6.04□□□□□ -1.44
PSEN1-221ENST00000557293 DSCR10P59022 87 aa6.04□□□□□ -1.44
PSEN1-221ENST00000557293 Q6ZQY7 126 aa6.04□□□□□ -1.44
PSEN1-221ENST00000557293 MUSTN1Q8IVN3 82 aa6.02□□□□□ -1.45
PSEN1-221ENST00000557293 IFITM1P13164 125 aa6.01□□□□□ -1.45
PSEN1-221ENST00000557293 SYS1-DBNDD2H3BUS1 97 aa6□□□□□ -1.45
PSEN1-221ENST00000557293 MUC12Q9UKN1 5478 aa5.99□□□□□ -1.45
PSEN1-221ENST00000557293 hADV29S1A0JD25 119 aa5.99□□□□□ -1.45
PSEN1-221ENST00000557293 H3BUT2 72 aa5.99□□□□□ -1.45
PSEN1-221ENST00000557293 SNRPEP62304 92 aaKnown RBP5.99□□□□□ -1.45
PSEN1-221ENST00000557293 LINC01545Q5VT33 79 aa5.99□□□□□ -1.45
PSEN1-221ENST00000557293 HIST3H2BBQ8N257 126 aa5.99□□□□□ -1.45
PSEN1-221ENST00000557293 Q8N9P0 234 aaPredicted RBP5.99□□□□□ -1.45
PSEN1-221ENST00000557293 ANKRD39Q53RE8 183 aa5.96□□□□□ -1.46
PSEN1-221ENST00000557293 SS18L2Q9UHA2 77 aa5.96□□□□□ -1.46
PSEN1-221ENST00000557293 VAMP3Q15836 100 aa5.95□□□□□ -1.46
PSEN1-221ENST00000557293 SCGB1D4Q6XE38 83 aa5.95□□□□□ -1.46
PSEN1-221ENST00000557293 Q6ZVH6 145 aa5.95□□□□□ -1.46
PSEN1-221ENST00000557293 A8MWP4 228 aa5.94□□□□□ -1.46
PSEN1-221ENST00000557293 LINC00313P59037 77 aa5.94□□□□□ -1.46
PSEN1-221ENST00000557293 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.94□□□□□ -1.46
PSEN1-221ENST00000557293 COPS9Q8WXC6 57 aa5.94□□□□□ -1.46
PSEN1-221ENST00000557293 HIST1H2BLQ99880 126 aa5.94□□□□□ -1.46
PSEN1-221ENST00000557293 SNHG12Q9BXW3 62 aa5.94□□□□□ -1.46
PSEN1-221ENST00000557293 PET117Q6UWS5 81 aa5.93□□□□□ -1.46
PSEN1-221ENST00000557293 TEN1Q86WV5 123 aa5.93□□□□□ -1.46
PSEN1-221ENST00000557293 PPDPFLQ8WWR9 84 aa5.93□□□□□ -1.46
PSEN1-221ENST00000557293 A0A087WSZ3 146 aa5.92□□□□□ -1.46
PSEN1-221ENST00000557293 SCGB1D1O95968 90 aa5.91□□□□□ -1.46
PSEN1-221ENST00000557293 S100A6P06703 90 aa5.91□□□□□ -1.46
PSEN1-221ENST00000557293 PYY3Q5JQD4 70 aa5.89□□□□□ -1.47
PSEN1-221ENST00000557293 MTURNQ8N3F0 131 aa5.89□□□□□ -1.47
PSEN1-221ENST00000557293 C3orf79P0CE67 100 aa5.88□□□□□ -1.47
PSEN1-221ENST00000557293 SIGMAR1Q99720 223 aa5.87□□□□□ -1.47
PSEN1-221ENST00000557293 KRTAP5-9P26371 169 aa5.86□□□□□ -1.47
PSEN1-221ENST00000557293 A0A1W2PNM2 257 aa5.85□□□□□ -1.47
PSEN1-221ENST00000557293 SPINK7P58062 85 aa5.85□□□□□ -1.47
PSEN1-221ENST00000557293 IGKV4-1P06312 121 aa5.84□□□□□ -1.47
PSEN1-221ENST00000557293 SMIM6P0DI80 62 aa5.84□□□□□ -1.47
PSEN1-221ENST00000557293 NDUFV3P56181 108 aaKnown RBP5.84□□□□□ -1.47
PSEN1-221ENST00000557293 S100A2P29034 98 aa5.82□□□□□ -1.48
PSEN1-221ENST00000557293 A6NN06 94 aa5.8□□□□□ -1.48
PSEN1-221ENST00000557293 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
PSEN1-221ENST00000557293 DEFB116Q30KQ4 102 aa5.8□□□□□ -1.48
PSEN1-221ENST00000557293 ATOH7Q8N100 152 aa5.8□□□□□ -1.48
PSEN1-221ENST00000557293 C12orf57Q99622 126 aa5.8□□□□□ -1.48
PSEN1-221ENST00000557293 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
PSEN1-221ENST00000557293 KMT2DO14686 5537 aa5.79□□□□□ -1.48
PSEN1-221ENST00000557293 MT1BP07438 61 aa5.79□□□□□ -1.48
PSEN1-221ENST00000557293 BVES-AS1Q5T3Y7 98 aa5.79□□□□□ -1.48
PSEN1-221ENST00000557293 ZCCHC13Q8WW36 166 aaKnown RBP5.79□□□□□ -1.48
PSEN1-221ENST00000557293 LINC00472Q9H8W2 130 aa5.79□□□□□ -1.48
PSEN1-221ENST00000557293 H3BMG7 143 aa5.78□□□□□ -1.48
PSEN1-221ENST00000557293 KRTDAPP60985 99 aa5.78□□□□□ -1.48
PSEN1-221ENST00000557293 IGHV6-1A0A0B4J1U7 121 aa5.77□□□□□ -1.49
PSEN1-221ENST00000557293 MDN1Q9NU22 5596 aa5.77□□□□□ -1.49
PSEN1-221ENST00000557293 FAM218AQ96MZ4 157 aa5.76□□□□□ -1.49
PSEN1-221ENST00000557293 WFDC13Q8IUB5 93 aa5.75□□□□□ -1.49
PSEN1-221ENST00000557293 GHRHP01286 108 aa5.73□□□□□ -1.49
PSEN1-221ENST00000557293 TRBV7-4A0A0J9YYF1 115 aa5.72□□□□□ -1.49
PSEN1-221ENST00000557293 KRTAP10-5P60370 271 aa5.72□□□□□ -1.49
PSEN1-221ENST00000557293 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
PSEN1-221ENST00000557293 C8orf87E5RJ46 101 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms