RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 RPS28P62857 69 aaKnown RBP2.92□□□□□ -1.94
ATXN3-241ENST00000556374 HIGD2BQ4VC39 106 aa2.92□□□□□ -1.94
ATXN3-241ENST00000556374 Q6ZVQ6 151 aa2.92□□□□□ -1.94
ATXN3-241ENST00000556374 C6orf48Q9UBA6 75 aa2.92□□□□□ -1.94
ATXN3-241ENST00000556374 NDUFC1O43677 76 aa2.91□□□□□ -1.94
ATXN3-241ENST00000556374 LINC01547P58512 204 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-241ENST00000556374 LYPD5Q6UWN5 251 aa2.91□□□□□ -1.94
ATXN3-241ENST00000556374 C20orf197Q8N268 126 aa2.91□□□□□ -1.94
ATXN3-241ENST00000556374 XAGE1AQ9HD64 81 aa2.91□□□□□ -1.94
ATXN3-241ENST00000556374 HUWE1Q7Z6Z7 4374 aaKnown RBP2.91□□□□□ -1.94
ATXN3-241ENST00000556374 IGKV2D-24A0A075B6R9 120 aa2.9□□□□□ -1.95
ATXN3-241ENST00000556374 LOC107984640A0A0U1RRK4 108 aa2.9□□□□□ -1.95
ATXN3-241ENST00000556374 VPREB1P12018 145 aa2.9□□□□□ -1.95
ATXN3-241ENST00000556374 C5orf47Q569G3 176 aa2.9□□□□□ -1.95
ATXN3-241ENST00000556374 FAM19A1Q7Z5A9 133 aa2.9□□□□□ -1.95
ATXN3-241ENST00000556374 WFDC9Q8NEX5 89 aa2.9□□□□□ -1.95
ATXN3-241ENST00000556374 RMI2Q96E14 147 aa2.9□□□□□ -1.95
ATXN3-241ENST00000556374 PLECQ15149 4684 aaKnown RBP2.9□□□□□ -1.95
ATXN3-241ENST00000556374 TRBV7-4A0A0J9YYF1 115 aa2.89□□□□□ -1.95
ATXN3-241ENST00000556374 ETDCA0A1B0GVM5 59 aa2.89□□□□□ -1.95
ATXN3-241ENST00000556374 FUSP35637 526 aaKnown RBP eCLIP2.89□□□□□ -1.95
ATXN3-241ENST00000556374 SYCNQ0VAF6 134 aa2.89□□□□□ -1.95
ATXN3-241ENST00000556374 NREPQ16612 68 aa2.89□□□□□ -1.95
ATXN3-241ENST00000556374 Q6ZRU5 148 aa2.89□□□□□ -1.95
ATXN3-241ENST00000556374 FAM19A5Q7Z5A7 132 aaPredicted RBP2.89□□□□□ -1.95
ATXN3-241ENST00000556374 WFDC10BQ8IUB3 73 aa2.89□□□□□ -1.95
ATXN3-241ENST00000556374 Q8NDZ9 215 aa2.89□□□□□ -1.95
ATXN3-241ENST00000556374 SERP1Q9Y6X1 66 aa2.89□□□□□ -1.95
ATXN3-241ENST00000556374 DEFB131BA0A096LNP1 70 aa2.88□□□□□ -1.95
ATXN3-241ENST00000556374 F8WEM9 126 aa2.88□□□□□ -1.95
ATXN3-241ENST00000556374 BPY2O14599 106 aa2.88□□□□□ -1.95
ATXN3-241ENST00000556374 SEC61BP60468 96 aaKnown RBP2.88□□□□□ -1.95
ATXN3-241ENST00000556374 LINC01556Q5JQF7 62 aa2.88□□□□□ -1.95
ATXN3-241ENST00000556374 DPH3Q96FX2 82 aa2.88□□□□□ -1.95
ATXN3-241ENST00000556374 DHRS4-AS1Q9P1J3 65 aa2.88□□□□□ -1.95
ATXN3-241ENST00000556374 HERC1Q15751 4861 aa2.87□□□□□ -1.95
ATXN3-241ENST00000556374 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
ATXN3-241ENST00000556374 A0A1B0GW54 56 aa2.87□□□□□ -1.95
ATXN3-241ENST00000556374 KLKP1Q107X0 134 aa2.87□□□□□ -1.95
ATXN3-241ENST00000556374 SCXQ7RTU7 201 aa2.87□□□□□ -1.95
ATXN3-241ENST00000556374 C15orf56Q8N910 161 aa2.87□□□□□ -1.95
ATXN3-241ENST00000556374 C11orf45Q8TAV5 145 aa2.87□□□□□ -1.95
ATXN3-241ENST00000556374 RETNQ9HD89 108 aa2.87□□□□□ -1.95
ATXN3-241ENST00000556374 TRAV10A0A0B4J240 114 aa2.86□□□□□ -1.95
ATXN3-241ENST00000556374 ERC2-IT1O76042 136 aa2.86□□□□□ -1.95
ATXN3-241ENST00000556374 DEFB105AQ8NG35 78 aa2.86□□□□□ -1.95
ATXN3-241ENST00000556374 PKIGQ9Y2B9 76 aa2.86□□□□□ -1.95
ATXN3-241ENST00000556374 M0R2N4 97 aa2.85□□□□□ -1.95
ATXN3-241ENST00000556374 TLX1NBP0CAT3 122 aa2.85□□□□□ -1.95
ATXN3-241ENST00000556374 UBE2BP63146 152 aa2.85□□□□□ -1.95
ATXN3-241ENST00000556374 Q6ZRP5 223 aa2.85□□□□□ -1.95
ATXN3-241ENST00000556374 C7orf33Q8WU49 177 aa2.85□□□□□ -1.95
ATXN3-241ENST00000556374 CYSTM1Q9H1C7 97 aa2.85□□□□□ -1.95
ATXN3-241ENST00000556374 KCNQ1DNQ9H478 68 aa2.85□□□□□ -1.95
ATXN3-241ENST00000556374 SNURFQ9Y675 71 aa2.85□□□□□ -1.95
ATXN3-241ENST00000556374 DNAH10Q8IVF4 4471 aa2.85□□□□□ -1.95
ATXN3-241ENST00000556374 SMIM26A0A096LP01 95 aa2.84□□□□□ -1.95
ATXN3-241ENST00000556374 H7BZZ5 65 aa2.84□□□□□ -1.95
ATXN3-241ENST00000556374 IGKV4-1P06312 121 aa2.84□□□□□ -1.95
ATXN3-241ENST00000556374 DNAH10OSP0CZ25 163 aa2.84□□□□□ -1.95
ATXN3-241ENST00000556374 ESRGQ1W209 222 aa2.84□□□□□ -1.95
ATXN3-241ENST00000556374 Q6ZRX8 168 aa2.84□□□□□ -1.95
ATXN3-241ENST00000556374 TMEM254Q8TBM7 123 aa2.84□□□□□ -1.95
ATXN3-241ENST00000556374 C1orf137Q5JT78 98 aa2.83□□□□□ -1.96
ATXN3-241ENST00000556374 SERTAD4-AS1Q5TG53 156 aa2.83□□□□□ -1.96
ATXN3-241ENST00000556374 KRTAP26-1Q6PEX3 210 aa2.83□□□□□ -1.96
ATXN3-241ENST00000556374 HRCT1Q6UXD1 115 aa2.83□□□□□ -1.96
ATXN3-241ENST00000556374 MRPL55Q7Z7F7 128 aaKnown RBP2.83□□□□□ -1.96
ATXN3-241ENST00000556374 KRTAP7-1Q8IUC3 87 aa2.83□□□□□ -1.96
ATXN3-241ENST00000556374 TM2D3Q9BRN9 247 aa2.83□□□□□ -1.96
ATXN3-241ENST00000556374 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
ATXN3-241ENST00000556374 SORL1Q92673 2214 aa2.83□□□□□ -1.96
ATXN3-241ENST00000556374 IGLV5-48A0A075B6I7 105 aa2.82□□□□□ -1.96
ATXN3-241ENST00000556374 RPL37AP8A6NKH3 93 aa2.82□□□□□ -1.96
ATXN3-241ENST00000556374 C14orf177Q52M58 125 aa2.82□□□□□ -1.96
ATXN3-241ENST00000556374 REG3GQ6UW15 175 aa2.82□□□□□ -1.96
ATXN3-241ENST00000556374 Q8NBF4 154 aa2.82□□□□□ -1.96
ATXN3-241ENST00000556374 KMT2AQ03164 3969 aa2.81□□□□□ -1.96
ATXN3-241ENST00000556374 DMBT1Q9UGM3 2413 aaPredicted RBP2.81□□□□□ -1.96
ATXN3-241ENST00000556374 IGLV1-50A0A075B6I6 118 aa2.81□□□□□ -1.96
ATXN3-241ENST00000556374 PSCAO43653 123 aa2.81□□□□□ -1.96
ATXN3-241ENST00000556374 UBE2DNLQ8IWF7 75 aa2.81□□□□□ -1.96
ATXN3-241ENST00000556374 Q8N377 158 aa2.81□□□□□ -1.96
ATXN3-241ENST00000556374 Q8N9L7 120 aa2.81□□□□□ -1.96
ATXN3-241ENST00000556374 PKHD1P08F94 4074 aa2.81□□□□□ -1.96
ATXN3-241ENST00000556374 NDUFB1O75438 58 aa2.8□□□□□ -1.96
ATXN3-241ENST00000556374 OXTP01178 125 aa2.8□□□□□ -1.96
ATXN3-241ENST00000556374 SPRR1AP35321 89 aa2.8□□□□□ -1.96
ATXN3-241ENST00000556374 UBE2AP49459 152 aa2.8□□□□□ -1.96
ATXN3-241ENST00000556374 Q5XG85 94 aa2.8□□□□□ -1.96
ATXN3-241ENST00000556374 LINC00588Q9Y4M8 146 aa2.8□□□□□ -1.96
ATXN3-241ENST00000556374 DYNC1H1Q14204 4646 aaKnown RBP2.8□□□□□ -1.96
ATXN3-241ENST00000556374 DNAH11Q96DT5 4516 aa2.79□□□□□ -1.96
ATXN3-241ENST00000556374 A0A0U1RQV1 116 aa2.79□□□□□ -1.96
ATXN3-241ENST00000556374 HCG22E2RYF7 251 aa2.79□□□□□ -1.96
ATXN3-241ENST00000556374 MP68P56378 58 aa2.79□□□□□ -1.96
ATXN3-241ENST00000556374 C4orf26Q17RF5 130 aa2.79□□□□□ -1.96
ATXN3-241ENST00000556374 SPRR4Q96PI1 79 aa2.79□□□□□ -1.96
ATXN3-241ENST00000556374 OCR1Q9BZK8 76 aa2.79□□□□□ -1.96
ATXN3-241ENST00000556374 A0A1W2PNM2 257 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms