RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 MIAQ16674 131 aa2.38□□□□□ -2.03
PRPF39-209ENST00000556353 PRR9Q5T870 116 aa2.38□□□□□ -2.03
PRPF39-209ENST00000556353 Q6JHZ5 121 aa2.38□□□□□ -2.03
PRPF39-209ENST00000556353 RETNLBQ9BQ08 111 aa2.38□□□□□ -2.03
PRPF39-209ENST00000556353 SMIM7Q9BQ49 75 aa2.38□□□□□ -2.03
PRPF39-209ENST00000556353 TXNDC17Q9BRA2 123 aa2.38□□□□□ -2.03
PRPF39-209ENST00000556353 CHCHD7Q9BUK0 85 aa2.38□□□□□ -2.03
PRPF39-209ENST00000556353 C8orf17Q9NRJ1 99 aa2.38□□□□□ -2.03
PRPF39-209ENST00000556353 GNG13Q9P2W3 67 aa2.38□□□□□ -2.03
PRPF39-209ENST00000556353 PRO1854Q9UHT4 67 aa2.38□□□□□ -2.03
PRPF39-209ENST00000556353 RNF213Q63HN8 5207 aa2.38□□□□□ -2.03
PRPF39-209ENST00000556353 TRBV25-1A0A075B6N4 114 aa2.37□□□□□ -2.03
PRPF39-209ENST00000556353 TRBV10-3A0A0K0K1G6 114 aa2.37□□□□□ -2.03
PRPF39-209ENST00000556353 hDV103S1A0JD37 113 aa2.37□□□□□ -2.03
PRPF39-209ENST00000556353 C16orf90A8MZG2 172 aa2.37□□□□□ -2.03
PRPF39-209ENST00000556353 LEPROTL1O95214 131 aa2.37□□□□□ -2.03
PRPF39-209ENST00000556353 IFI27P40305 119 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-209ENST00000556353 C9orf116Q5BN46 136 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-209ENST00000556353 RNASE13Q5GAN3 156 aaKnown RBP2.37□□□□□ -2.03
PRPF39-209ENST00000556353 ATP5EP2Q5VTU8 51 aa2.37□□□□□ -2.03
PRPF39-209ENST00000556353 LYZL2Q7Z4W2 148 aa2.37□□□□□ -2.03
PRPF39-209ENST00000556353 SMCR5Q8TEV8 140 aa2.37□□□□□ -2.03
PRPF39-209ENST00000556353 CDC42SE1Q9NRR8 79 aa2.37□□□□□ -2.03
PRPF39-209ENST00000556353 LRP2P98164 4655 aa2.37□□□□□ -2.03
PRPF39-209ENST00000556353 A0A0J9YX75 114 aa2.36□□□□□ -2.03
PRPF39-209ENST00000556353 CEBPZOSA8MTT3 80 aa2.36□□□□□ -2.03
PRPF39-209ENST00000556353 BPY2O14599 106 aa2.36□□□□□ -2.03
PRPF39-209ENST00000556353 SH2D1AO60880 128 aa2.36□□□□□ -2.03
PRPF39-209ENST00000556353 UBE2D1P51668 147 aa2.36□□□□□ -2.03
PRPF39-209ENST00000556353 CMC4P56277 68 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-209ENST00000556353 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
PRPF39-209ENST00000556353 ATXN8Q156A1 80 aa2.36□□□□□ -2.03
PRPF39-209ENST00000556353 S100A7L2Q5SY68 101 aa2.36□□□□□ -2.03
PRPF39-209ENST00000556353 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.36□□□□□ -2.03
PRPF39-209ENST00000556353 Q8N814 137 aa2.36□□□□□ -2.03
PRPF39-209ENST00000556353 LIMD2Q9BT23 127 aa2.36□□□□□ -2.03
PRPF39-209ENST00000556353 TTTY13Q9BZ97 58 aa2.36□□□□□ -2.03
PRPF39-209ENST00000556353 HCG22E2RYF7 251 aa2.35□□□□□ -2.03
PRPF39-209ENST00000556353 COX6CP09669 75 aa2.35□□□□□ -2.03
PRPF39-209ENST00000556353 IAPPP10997 89 aa2.35□□□□□ -2.03
PRPF39-209ENST00000556353 SPINK13Q1W4C9 94 aa2.35□□□□□ -2.03
PRPF39-209ENST00000556353 LUZP6Q538Z0 58 aa2.35□□□□□ -2.03
PRPF39-209ENST00000556353 C20orf197Q8N268 126 aa2.35□□□□□ -2.03
PRPF39-209ENST00000556353 FAM19A2Q8N3H0 131 aa2.35□□□□□ -2.03
PRPF39-209ENST00000556353 Q8NDZ9 215 aa2.35□□□□□ -2.03
PRPF39-209ENST00000556353 RPP21Q9H633 154 aaKnown RBP2.35□□□□□ -2.03
PRPF39-209ENST00000556353 UBE2D4Q9Y2X8 147 aa2.35□□□□□ -2.03
PRPF39-209ENST00000556353 TRAV22A0A0B4J277 110 aa2.34□□□□□ -2.03
PRPF39-209ENST00000556353 NBDYA0A0U1RRE5 68 aa2.34□□□□□ -2.03
PRPF39-209ENST00000556353 TEX49A0A1B0GTD5 131 aa2.34□□□□□ -2.03
PRPF39-209ENST00000556353 TMEM223A0PJW6 202 aa2.34□□□□□ -2.03
PRPF39-209ENST00000556353 H3BRN7 92 aa2.34□□□□□ -2.03
PRPF39-209ENST00000556353 H3BVH4 76 aa2.34□□□□□ -2.03
PRPF39-209ENST00000556353 SPART-AS1P0CW21 52 aa2.34□□□□□ -2.03
PRPF39-209ENST00000556353 HTN3P15516 51 aa2.34□□□□□ -2.03
PRPF39-209ENST00000556353 ROMO1P60602 79 aa2.34□□□□□ -2.03
PRPF39-209ENST00000556353 LOC107984156A0A0G2JMH3 177 aa2.33□□□□□ -2.04
PRPF39-209ENST00000556353 F8WEM9 126 aa2.33□□□□□ -2.04
PRPF39-209ENST00000556353 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
PRPF39-209ENST00000556353 SERF2P84101 59 aa2.33□□□□□ -2.04
PRPF39-209ENST00000556353 Q6ZRN7 208 aaPredicted RBP2.33□□□□□ -2.04
PRPF39-209ENST00000556353 ARL17AQ8IVW1 177 aa2.33□□□□□ -2.04
PRPF39-209ENST00000556353 UBE2DNLQ8IWF7 75 aa2.33□□□□□ -2.04
PRPF39-209ENST00000556353 A0A087WSZ3 146 aa2.32□□□□□ -2.04
PRPF39-209ENST00000556353 IGKV2D-26A0A0A0MRZ7 120 aa2.32□□□□□ -2.04
PRPF39-209ENST00000556353 IGHV3-73A0A0B4J1V6 119 aa2.32□□□□□ -2.04
PRPF39-209ENST00000556353 SDHAF1A6NFY7 115 aa2.32□□□□□ -2.04
PRPF39-209ENST00000556353 LECT2O14960 151 aa2.32□□□□□ -2.04
PRPF39-209ENST00000556353 DEFB130BP0DP73 79 aa2.32□□□□□ -2.04
PRPF39-209ENST00000556353 DEFB130AP0DP74 79 aa2.32□□□□□ -2.04
PRPF39-209ENST00000556353 ZNF22P17026 224 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-209ENST00000556353 RPL28P46779 137 aaKnown RBP2.32□□□□□ -2.04
PRPF39-209ENST00000556353 C1orf134Q5TEV5 83 aa2.32□□□□□ -2.04
PRPF39-209ENST00000556353 Q5VV11 94 aa2.32□□□□□ -2.04
PRPF39-209ENST00000556353 C2orf82Q6UX34 121 aa2.32□□□□□ -2.04
PRPF39-209ENST00000556353 CASC2Q6XLA1 102 aa2.32□□□□□ -2.04
PRPF39-209ENST00000556353 SPTSSBQ8NFR3 76 aa2.32□□□□□ -2.04
PRPF39-209ENST00000556353 TMSB15BA0A087X1C1 80 aa2.31□□□□□ -2.04
PRPF39-209ENST00000556353 TRBV30A0A0K0K1B3 111 aa2.31□□□□□ -2.04
PRPF39-209ENST00000556353 LOC101927531A0A1B0GV80 90 aa2.31□□□□□ -2.04
PRPF39-209ENST00000556353 LINC01549A6NIU2 74 aa2.31□□□□□ -2.04
PRPF39-209ENST00000556353 ZNF815PA8K554 130 aa2.31□□□□□ -2.04
PRPF39-209ENST00000556353 A8MWP4 228 aa2.31□□□□□ -2.04
PRPF39-209ENST00000556353 FAM229BQ4G0N7 80 aa2.31□□□□□ -2.04
PRPF39-209ENST00000556353 SPANXN5Q5MJ07 72 aa2.31□□□□□ -2.04
PRPF39-209ENST00000556353 TMEM263Q8WUH6 116 aaKnown RBP2.31□□□□□ -2.04
PRPF39-209ENST00000556353 NOP10Q9NPE3 64 aaKnown RBP2.31□□□□□ -2.04
PRPF39-209ENST00000556353 C14orf132Q9NPU4 83 aa2.31□□□□□ -2.04
PRPF39-209ENST00000556353 A0A096LPF7 62 aa2.3□□□□□ -2.04
PRPF39-209ENST00000556353 TRBV6-8A0A0A6YYG3 113 aa2.3□□□□□ -2.04
PRPF39-209ENST00000556353 A0A0J9YY99 117 aa2.3□□□□□ -2.04
PRPF39-209ENST00000556353 A0A1B0GVX0 72 aa2.3□□□□□ -2.04
PRPF39-209ENST00000556353 A6NED7 52 aa2.3□□□□□ -2.04
PRPF39-209ENST00000556353 M0R3E3 92 aa2.3□□□□□ -2.04
PRPF39-209ENST00000556353 CRPP02741 224 aa2.3□□□□□ -2.04
PRPF39-209ENST00000556353 MGST1P10620 155 aaKnown RBP2.3□□□□□ -2.04
PRPF39-209ENST00000556353 HTN1P15515 57 aa2.3□□□□□ -2.04
PRPF39-209ENST00000556353 HAMPP81172 84 aa2.3□□□□□ -2.04
PRPF39-209ENST00000556353 Q6ZTI0 123 aa2.3□□□□□ -2.04
PRPF39-209ENST00000556353 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms