RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 SEC11CQ9BY50 192 aa3.31□□□□□ -1.88
PRKCH-220ENST00000556164 IGIPA6NJ69 53 aa3.3□□□□□ -1.88
PRKCH-220ENST00000556164 A8MUN3 132 aa3.3□□□□□ -1.88
PRKCH-220ENST00000556164 TRGC2P03986 189 aa3.3□□□□□ -1.88
PRKCH-220ENST00000556164 ASB16-AS1Q495Z4 193 aa3.3□□□□□ -1.88
PRKCH-220ENST00000556164 FP248Q71RG6 208 aaPredicted RBP3.3□□□□□ -1.88
PRKCH-220ENST00000556164 Q8N8P6 123 aa3.3□□□□□ -1.88
PRKCH-220ENST00000556164 COX7B2Q8TF08 81 aa3.3□□□□□ -1.88
PRKCH-220ENST00000556164 RAB37Q96AX2 223 aa3.3□□□□□ -1.88
PRKCH-220ENST00000556164 KRTAP4-1Q9BYQ7 146 aa3.3□□□□□ -1.88
PRKCH-220ENST00000556164 TRAV9-1A0A075B6T8 112 aa3.29□□□□□ -1.88
PRKCH-220ENST00000556164 UQCRQO14949 82 aa3.29□□□□□ -1.88
PRKCH-220ENST00000556164 KRTAP13-3Q3SY46 172 aa3.29□□□□□ -1.88
PRKCH-220ENST00000556164 SPAG11AQ6PDA7 123 aa3.29□□□□□ -1.88
PRKCH-220ENST00000556164 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
PRKCH-220ENST00000556164 UQCR10Q9UDW1 63 aa3.29□□□□□ -1.88
PRKCH-220ENST00000556164 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
PRKCH-220ENST00000556164 ATOH7Q8N100 152 aa3.28□□□□□ -1.88
PRKCH-220ENST00000556164 TOMM6Q96B49 74 aa3.28□□□□□ -1.88
PRKCH-220ENST00000556164 NAA38Q9BRA0 125 aaKnown RBP3.28□□□□□ -1.88
PRKCH-220ENST00000556164 HIGD2AQ9BW72 106 aa3.28□□□□□ -1.88
PRKCH-220ENST00000556164 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.89
PRKCH-220ENST00000556164 TMEM223A0PJW6 202 aa3.27□□□□□ -1.89
PRKCH-220ENST00000556164 F8W1H4 67 aa3.27□□□□□ -1.89
PRKCH-220ENST00000556164 H3BMG7 143 aa3.27□□□□□ -1.89
PRKCH-220ENST00000556164 K7EMI3 77 aa3.27□□□□□ -1.89
PRKCH-220ENST00000556164 M0R378 163 aa3.27□□□□□ -1.89
PRKCH-220ENST00000556164 LINC01545Q5VT33 79 aa3.27□□□□□ -1.89
PRKCH-220ENST00000556164 DAND5Q8N907 189 aa3.27□□□□□ -1.89
PRKCH-220ENST00000556164 Q8N9P0 234 aaPredicted RBP3.27□□□□□ -1.89
PRKCH-220ENST00000556164 FAM236AA0A1B0GUQ0 79 aa3.26□□□□□ -1.89
PRKCH-220ENST00000556164 FAM236BA0A1B0GV22 79 aa3.26□□□□□ -1.89
PRKCH-220ENST00000556164 FABP4P15090 132 aa3.26□□□□□ -1.89
PRKCH-220ENST00000556164 SLC25A34Q6PIV7 304 aa3.26□□□□□ -1.89
PRKCH-220ENST00000556164 SPRR4Q96PI1 79 aa3.26□□□□□ -1.89
PRKCH-220ENST00000556164 SCGB3A1Q96QR1 104 aa3.26□□□□□ -1.89
PRKCH-220ENST00000556164 HIST1H2BLQ99880 126 aa3.26□□□□□ -1.89
PRKCH-220ENST00000556164 KRTAP9-3Q9BYQ3 159 aa3.26□□□□□ -1.89
PRKCH-220ENST00000556164 NXT2Q9NPJ8 142 aaKnown RBP3.26□□□□□ -1.89
PRKCH-220ENST00000556164 NDUFA12Q9UI09 145 aa3.26□□□□□ -1.89
PRKCH-220ENST00000556164 K7ERS5 55 aa3.25□□□□□ -1.89
PRKCH-220ENST00000556164 TAX1BP3O14907 124 aa3.25□□□□□ -1.89
PRKCH-220ENST00000556164 LGALS3P17931 250 aaKnown RBP3.25□□□□□ -1.89
PRKCH-220ENST00000556164 ADCYAP1P18509 176 aa3.25□□□□□ -1.89
PRKCH-220ENST00000556164 H3BRM9 83 aa3.24□□□□□ -1.89
PRKCH-220ENST00000556164 K7EP34 96 aa3.24□□□□□ -1.89
PRKCH-220ENST00000556164 SPINK1P00995 79 aa3.24□□□□□ -1.89
PRKCH-220ENST00000556164 TRACP01848 142 aa3.24□□□□□ -1.89
PRKCH-220ENST00000556164 FABP2P12104 132 aa3.24□□□□□ -1.89
PRKCH-220ENST00000556164 C9orf153Q5TBE3 101 aa3.24□□□□□ -1.89
PRKCH-220ENST00000556164 LCA10Q71F78 164 aa3.24□□□□□ -1.89
PRKCH-220ENST00000556164 TEN1Q86WV5 123 aa3.24□□□□□ -1.89
PRKCH-220ENST00000556164 Q8NDZ9 215 aa3.24□□□□□ -1.89
PRKCH-220ENST00000556164 BRK1Q8WUW1 75 aa3.24□□□□□ -1.89
PRKCH-220ENST00000556164 COX17Q14061 63 aa3.23□□□□□ -1.89
PRKCH-220ENST00000556164 FAM19A2Q8N3H0 131 aa3.23□□□□□ -1.89
PRKCH-220ENST00000556164 ZNF625Q96I27 306 aaPredicted RBP3.23□□□□□ -1.89
PRKCH-220ENST00000556164 ZNF73O43830 326 aaPredicted RBP3.22□□□□□ -1.89
PRKCH-220ENST00000556164 MT1HP80294 61 aa3.22□□□□□ -1.89
PRKCH-220ENST00000556164 MOBPQ13875 183 aa3.22□□□□□ -1.89
PRKCH-220ENST00000556164 SERP1Q9Y6X1 66 aa3.22□□□□□ -1.89
PRKCH-220ENST00000556164 LINC01549A6NIU2 74 aa3.21□□□□□ -1.9
PRKCH-220ENST00000556164 H3BT86 120 aa3.21□□□□□ -1.9
PRKCH-220ENST00000556164 IGLC3P0DOY3 106 aa3.21□□□□□ -1.9
PRKCH-220ENST00000556164 SMCR5Q8TEV8 140 aa3.21□□□□□ -1.9
PRKCH-220ENST00000556164 ETDCA0A1B0GVM5 59 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 NCR3O14931 201 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 SLC25A20O43772 301 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 HIST1H2BKO60814 126 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 SNCGO76070 127 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 MT-ATP8P03928 68 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 HIST1H2BJP06899 126 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 ZNF22P17026 224 aaPredicted RBP3.2□□□□□ -1.9
PRKCH-220ENST00000556164 HIST1H2BOP23527 126 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 HIST1H2BBP33778 126 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 LINC00158P58513 81 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 HIST1H2BDP58876 126 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 RPS29P62273 56 aaKnown RBP3.2□□□□□ -1.9
PRKCH-220ENST00000556164 HIST1H2BCP62807 126 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 HIST2H2BEQ16778 126 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 KRTAP19-2Q3LHN2 52 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.2□□□□□ -1.9
PRKCH-220ENST00000556164 SPANXA2-OT1Q8N9U9 137 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 HIST1H2BHQ93079 126 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 HIST1H2BNQ99877 126 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 HIST1H2BMQ99879 126 aa3.2□□□□□ -1.9
PRKCH-220ENST00000556164 TRBV20-1A0A075B6N2 111 aa3.19□□□□□ -1.9
PRKCH-220ENST00000556164 LINC01546A6NGU7 62 aa3.19□□□□□ -1.9
PRKCH-220ENST00000556164 LINC00483Q53H64 154 aa3.19□□□□□ -1.9
PRKCH-220ENST00000556164 PCOTHQ58A44 107 aa3.19□□□□□ -1.9
PRKCH-220ENST00000556164 SFTA2Q6UW10 78 aa3.19□□□□□ -1.9
PRKCH-220ENST00000556164 COX7CP15954 63 aa3.18□□□□□ -1.9
PRKCH-220ENST00000556164 SPRR1AP35321 89 aa3.18□□□□□ -1.9
PRKCH-220ENST00000556164 TSPEAR-AS2P59090 65 aa3.18□□□□□ -1.9
PRKCH-220ENST00000556164 KRTAP10-6P60371 365 aaPredicted RBP3.18□□□□□ -1.9
PRKCH-220ENST00000556164 TMEM170BQ5T4T1 132 aa3.18□□□□□ -1.9
PRKCH-220ENST00000556164 SSBP3-AS1Q7Z2R9 100 aa3.18□□□□□ -1.9
PRKCH-220ENST00000556164 MIR7-3HGQ8N6C7 128 aa3.18□□□□□ -1.9
PRKCH-220ENST00000556164 TRBV10-3A0A0K0K1G6 114 aa3.17□□□□□ -1.9
PRKCH-220ENST00000556164 C11orf86A6NJI1 115 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms