RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 S100A2P29034 98 aa3.54□□□□□ -1.84
TMEM260-209ENST00000556079 JOSD1Q15040 202 aaPredicted RBP3.54□□□□□ -1.84
TMEM260-209ENST00000556079 SPAG11AQ6PDA7 123 aa3.54□□□□□ -1.84
TMEM260-209ENST00000556079 SMIM29Q86T20 159 aa3.54□□□□□ -1.84
TMEM260-209ENST00000556079 KRTAP9-8Q9BYQ0 159 aa3.54□□□□□ -1.84
TMEM260-209ENST00000556079 SPINK1P00995 79 aa3.53□□□□□ -1.84
TMEM260-209ENST00000556079 S100A1P23297 94 aa3.53□□□□□ -1.84
TMEM260-209ENST00000556079 SSBP3-AS1Q7Z2R9 100 aa3.53□□□□□ -1.84
TMEM260-209ENST00000556079 DHRS4-AS1Q9P1J3 65 aa3.53□□□□□ -1.84
TMEM260-209ENST00000556079 C9orf92A6NGG3 77 aa3.52□□□□□ -1.85
TMEM260-209ENST00000556079 S100A6P06703 90 aa3.52□□□□□ -1.85
TMEM260-209ENST00000556079 IFITM1P13164 125 aa3.52□□□□□ -1.85
TMEM260-209ENST00000556079 TAL2Q16559 108 aa3.52□□□□□ -1.85
TMEM260-209ENST00000556079 FP248Q71RG6 208 aaPredicted RBP3.52□□□□□ -1.85
TMEM260-209ENST00000556079 HINT1P49773 126 aaPredicted RBP3.51□□□□□ -1.85
TMEM260-209ENST00000556079 C14orf144Q96I85 54 aa3.51□□□□□ -1.85
TMEM260-209ENST00000556079 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
TMEM260-209ENST00000556079 IGLV5-48A0A075B6I7 105 aa3.5□□□□□ -1.85
TMEM260-209ENST00000556079 A0A1B0GWB2 263 aa3.5□□□□□ -1.85
TMEM260-209ENST00000556079 SLC25A20O43772 301 aa3.5□□□□□ -1.85
TMEM260-209ENST00000556079 LAMTOR3Q9UHA4 124 aa3.5□□□□□ -1.85
TMEM260-209ENST00000556079 PAM16Q9Y3D7 125 aa3.5□□□□□ -1.85
TMEM260-209ENST00000556079 TRBV7-6A0A0J9YX20 115 aa3.49□□□□□ -1.85
TMEM260-209ENST00000556079 TEX49A0A1B0GTD5 131 aa3.49□□□□□ -1.85
TMEM260-209ENST00000556079 HSBP1L1C9JCN9 74 aa3.49□□□□□ -1.85
TMEM260-209ENST00000556079 COX8AP10176 69 aa3.49□□□□□ -1.85
TMEM260-209ENST00000556079 C2orf91Q6ZV80 131 aa3.49□□□□□ -1.85
TMEM260-209ENST00000556079 Q6ZVH6 145 aa3.49□□□□□ -1.85
TMEM260-209ENST00000556079 TRAV13-2A0A0B4J235 113 aa3.48□□□□□ -1.85
TMEM260-209ENST00000556079 RPS29P62273 56 aaKnown RBP3.48□□□□□ -1.85
TMEM260-209ENST00000556079 CTAG1AP78358 180 aa3.48□□□□□ -1.85
TMEM260-209ENST00000556079 ASB16-AS1Q495Z4 193 aa3.48□□□□□ -1.85
TMEM260-209ENST00000556079 SPATA45Q537H7 98 aa3.48□□□□□ -1.85
TMEM260-209ENST00000556079 LINC00575Q6W349 94 aa3.48□□□□□ -1.85
TMEM260-209ENST00000556079 Q6ZQY7 126 aa3.48□□□□□ -1.85
TMEM260-209ENST00000556079 Q75L30 129 aa3.48□□□□□ -1.85
TMEM260-209ENST00000556079 HIST1H4GQ99525 98 aa3.48□□□□□ -1.85
TMEM260-209ENST00000556079 H3BUT2 72 aa3.47□□□□□ -1.85
TMEM260-209ENST00000556079 C1orf195Q5TG92 126 aa3.47□□□□□ -1.85
TMEM260-209ENST00000556079 FAM218AQ96MZ4 157 aa3.47□□□□□ -1.85
TMEM260-209ENST00000556079 PRO1933Q9H354 126 aa3.47□□□□□ -1.85
TMEM260-209ENST00000556079 CBY1Q9Y3M2 126 aa3.47□□□□□ -1.85
TMEM260-209ENST00000556079 CFC1BP0CG36 223 aa3.46□□□□□ -1.86
TMEM260-209ENST00000556079 CFC1P0CG37 223 aa3.46□□□□□ -1.86
TMEM260-209ENST00000556079 PCOTHQ58A44 107 aa3.46□□□□□ -1.86
TMEM260-209ENST00000556079 COPS9Q8WXC6 57 aa3.46□□□□□ -1.86
TMEM260-209ENST00000556079 hADV29S1A0JD25 119 aa3.45□□□□□ -1.86
TMEM260-209ENST00000556079 AKR1D1P51857 326 aa3.45□□□□□ -1.86
TMEM260-209ENST00000556079 FXYD2P54710 66 aa3.45□□□□□ -1.86
TMEM260-209ENST00000556079 KRTAP19-2Q3LHN2 52 aa3.45□□□□□ -1.86
TMEM260-209ENST00000556079 SLC25A34Q6PIV7 304 aa3.45□□□□□ -1.86
TMEM260-209ENST00000556079 IGFL1Q6UW32 110 aa3.45□□□□□ -1.86
TMEM260-209ENST00000556079 VAMP8Q9BV40 100 aa3.45□□□□□ -1.86
TMEM260-209ENST00000556079 K7ERJ3 54 aa3.44□□□□□ -1.86
TMEM260-209ENST00000556079 DLEU1O43261 78 aa3.44□□□□□ -1.86
TMEM260-209ENST00000556079 PYY3Q5JQD4 70 aa3.44□□□□□ -1.86
TMEM260-209ENST00000556079 LIMD2Q9BT23 127 aa3.44□□□□□ -1.86
TMEM260-209ENST00000556079 A0A1B0GV72 72 aa3.43□□□□□ -1.86
TMEM260-209ENST00000556079 SEC61BP60468 96 aaKnown RBP3.43□□□□□ -1.86
TMEM260-209ENST00000556079 CD164Q04900 197 aa3.43□□□□□ -1.86
TMEM260-209ENST00000556079 NHP2Q9NX24 153 aaKnown RBP3.43□□□□□ -1.86
TMEM260-209ENST00000556079 FLGP20930 4061 aaPredicted RBP3.42□□□□□ -1.86
TMEM260-209ENST00000556079 VAMP3Q15836 100 aa3.42□□□□□ -1.86
TMEM260-209ENST00000556079 CLEC2BQ92478 149 aa3.42□□□□□ -1.86
TMEM260-209ENST00000556079 RAB37Q96AX2 223 aa3.42□□□□□ -1.86
TMEM260-209ENST00000556079 HIGD1BQ9P298 99 aa3.42□□□□□ -1.86
TMEM260-209ENST00000556079 IGLV8-61A0A075B6I0 122 aa3.41□□□□□ -1.86
TMEM260-209ENST00000556079 A0A0B4J2C4 111 aa3.41□□□□□ -1.86
TMEM260-209ENST00000556079 TRBV7-7A0A0K0K1E9 115 aa3.41□□□□□ -1.86
TMEM260-209ENST00000556079 F8WEM9 126 aa3.41□□□□□ -1.86
TMEM260-209ENST00000556079 OCIAD2Q56VL3 154 aa3.41□□□□□ -1.86
TMEM260-209ENST00000556079 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.41□□□□□ -1.86
TMEM260-209ENST00000556079 CEND1Q8N111 149 aa3.41□□□□□ -1.86
TMEM260-209ENST00000556079 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
TMEM260-209ENST00000556079 USH2AO75445 5202 aa3.41□□□□□ -1.86
TMEM260-209ENST00000556079 Q5XG85 94 aa3.4□□□□□ -1.87
TMEM260-209ENST00000556079 BVES-AS1Q5T3Y7 98 aa3.39□□□□□ -1.87
TMEM260-209ENST00000556079 SNHG12Q9BXW3 62 aa3.39□□□□□ -1.87
TMEM260-209ENST00000556079 RPL37P61927 97 aaKnown RBP3.38□□□□□ -1.87
TMEM260-209ENST00000556079 MT1HP80294 61 aa3.38□□□□□ -1.87
TMEM260-209ENST00000556079 OBSCN-AS1Q96MR7 158 aa3.38□□□□□ -1.87
TMEM260-209ENST00000556079 PRO1854Q9UHT4 67 aa3.38□□□□□ -1.87
TMEM260-209ENST00000556079 TCL1BO95988 128 aa3.37□□□□□ -1.87
TMEM260-209ENST00000556079 NDUFV3P56181 108 aaKnown RBP3.37□□□□□ -1.87
TMEM260-209ENST00000556079 Q6JHZ5 121 aa3.37□□□□□ -1.87
TMEM260-209ENST00000556079 A0A1W2PNM2 257 aa3.36□□□□□ -1.87
TMEM260-209ENST00000556079 FABP2P12104 132 aa3.36□□□□□ -1.87
TMEM260-209ENST00000556079 HSD52Q0P140 79 aa3.36□□□□□ -1.87
TMEM260-209ENST00000556079 Q96NJ1 140 aa3.36□□□□□ -1.87
TMEM260-209ENST00000556079 NAA38Q9BRA0 125 aaKnown RBP3.36□□□□□ -1.87
TMEM260-209ENST00000556079 A0A087WSZ3 146 aa3.35□□□□□ -1.87
TMEM260-209ENST00000556079 H0YGX0 51 aa3.35□□□□□ -1.87
TMEM260-209ENST00000556079 H3BMG7 143 aa3.35□□□□□ -1.87
TMEM260-209ENST00000556079 PSMB2P49721 201 aa3.34□□□□□ -1.87
TMEM260-209ENST00000556079 DSCR10P59022 87 aa3.34□□□□□ -1.87
TMEM260-209ENST00000556079 KRTAP10-6P60371 365 aaPredicted RBP3.34□□□□□ -1.87
TMEM260-209ENST00000556079 DEFB116Q30KQ4 102 aa3.34□□□□□ -1.87
TMEM260-209ENST00000556079 LST1O00453 97 aa3.33□□□□□ -1.88
TMEM260-209ENST00000556079 NOTCH2NLQ7Z3S9 236 aa3.33□□□□□ -1.88
TMEM260-209ENST00000556079 PPDPFLQ8WWR9 84 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms