RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 H3BQ85 93 aa4.37□□□□□ -1.71
SLIRP-204ENST00000555890 ZNF73O43830 326 aaPredicted RBP4.37□□□□□ -1.71
SLIRP-204ENST00000555890 COX7BP24311 80 aa4.37□□□□□ -1.71
SLIRP-204ENST00000555890 Q8N814 137 aa4.37□□□□□ -1.71
SLIRP-204ENST00000555890 ORMDL1Q9P0S3 153 aa4.37□□□□□ -1.71
SLIRP-204ENST00000555890 hADV29S1A0JD25 119 aa4.36□□□□□ -1.71
SLIRP-204ENST00000555890 LINC00575Q6W349 94 aa4.36□□□□□ -1.71
SLIRP-204ENST00000555890 Q6ZR54 194 aa4.36□□□□□ -1.71
SLIRP-204ENST00000555890 LINC00167Q96N53 147 aa4.36□□□□□ -1.71
SLIRP-204ENST00000555890 TEX49A0A1B0GTD5 131 aa4.35□□□□□ -1.71
SLIRP-204ENST00000555890 LRCOL1A6NCL2 159 aa4.35□□□□□ -1.71
SLIRP-204ENST00000555890 TMEM256-PLSCR3K7ERE1 68 aa4.35□□□□□ -1.71
SLIRP-204ENST00000555890 M0R2N4 97 aa4.35□□□□□ -1.71
SLIRP-204ENST00000555890 C7orf33Q8WU49 177 aa4.35□□□□□ -1.71
SLIRP-204ENST00000555890 KCNQ1DNQ9H478 68 aa4.35□□□□□ -1.71
SLIRP-204ENST00000555890 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.34□□□□□ -1.71
SLIRP-204ENST00000555890 XGP55808 180 aa4.34□□□□□ -1.71
SLIRP-204ENST00000555890 Q6ZRN7 208 aaPredicted RBP4.34□□□□□ -1.71
SLIRP-204ENST00000555890 C9orf163Q8N9P6 203 aa4.34□□□□□ -1.71
SLIRP-204ENST00000555890 ELOF1P60002 83 aaKnown RBP4.33□□□□□ -1.72
SLIRP-204ENST00000555890 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.33□□□□□ -1.72
SLIRP-204ENST00000555890 FAM19A5Q7Z5A7 132 aaPredicted RBP4.33□□□□□ -1.72
SLIRP-204ENST00000555890 MRPL55Q7Z7F7 128 aaKnown RBP4.33□□□□□ -1.72
SLIRP-204ENST00000555890 LINC00474Q9P2X8 69 aa4.33□□□□□ -1.72
SLIRP-204ENST00000555890 C22orf24Q9Y442 160 aa4.33□□□□□ -1.72
SLIRP-204ENST00000555890 IGLV1-50A0A075B6I6 118 aa4.32□□□□□ -1.72
SLIRP-204ENST00000555890 A0A087WTM6 91 aa4.32□□□□□ -1.72
SLIRP-204ENST00000555890 A0A096LNI7 61 aa4.32□□□□□ -1.72
SLIRP-204ENST00000555890 IGKV2-24A0A0C4DH68 120 aa4.32□□□□□ -1.72
SLIRP-204ENST00000555890 FAM168BA1KXE4 195 aa4.32□□□□□ -1.72
SLIRP-204ENST00000555890 JMJD7-PLA2G4BH0Y9G9 81 aa4.32□□□□□ -1.72
SLIRP-204ENST00000555890 OXTP01178 125 aa4.32□□□□□ -1.72
SLIRP-204ENST00000555890 ACYP1P07311 99 aa4.32□□□□□ -1.72
SLIRP-204ENST00000555890 C1orf134Q5TEV5 83 aa4.32□□□□□ -1.72
SLIRP-204ENST00000555890 ETDCA0A1B0GVM5 59 aa4.31□□□□□ -1.72
SLIRP-204ENST00000555890 RPL37AP8A6NKH3 93 aa4.31□□□□□ -1.72
SLIRP-204ENST00000555890 DHRS4-AS1Q9P1J3 65 aa4.31□□□□□ -1.72
SLIRP-204ENST00000555890 FAM240AA0A1B0GVK7 77 aa4.3□□□□□ -1.72
SLIRP-204ENST00000555890 SDIM1Q6ZPB5 146 aa4.3□□□□□ -1.72
SLIRP-204ENST00000555890 Q6ZQY7 126 aa4.3□□□□□ -1.72
SLIRP-204ENST00000555890 DPH3Q96FX2 82 aa4.3□□□□□ -1.72
SLIRP-204ENST00000555890 OBSCN-AS1Q96MR7 158 aa4.3□□□□□ -1.72
SLIRP-204ENST00000555890 SIGMAR1Q99720 223 aa4.3□□□□□ -1.72
SLIRP-204ENST00000555890 SPRR1AP35321 89 aa4.29□□□□□ -1.72
SLIRP-204ENST00000555890 REG3GQ6UW15 175 aa4.29□□□□□ -1.72
SLIRP-204ENST00000555890 KRTAP7-1Q8IUC3 87 aa4.29□□□□□ -1.72
SLIRP-204ENST00000555890 LAMTOR3Q9UHA4 124 aa4.29□□□□□ -1.72
SLIRP-204ENST00000555890 TNXBP22105 4242 aa4.29□□□□□ -1.72
SLIRP-204ENST00000555890 A0A1W2PNN7 141 aa4.28□□□□□ -1.72
SLIRP-204ENST00000555890 UBE2BP63146 152 aa4.28□□□□□ -1.72
SLIRP-204ENST00000555890 RBM3P98179 157 aaKnown RBP4.28□□□□□ -1.72
SLIRP-204ENST00000555890 Q6ZRX8 168 aa4.28□□□□□ -1.72
SLIRP-204ENST00000555890 C14orf132Q9NPU4 83 aa4.28□□□□□ -1.72
SLIRP-204ENST00000555890 KRTAP4-16G5E9R7 235 aaPredicted RBP4.27□□□□□ -1.73
SLIRP-204ENST00000555890 CHTF8P0CG12 524 aa4.27□□□□□ -1.73
SLIRP-204ENST00000555890 PDE6GP18545 87 aa4.27□□□□□ -1.73
SLIRP-204ENST00000555890 SMR3BP02814 79 aaPredicted RBP4.26□□□□□ -1.73
SLIRP-204ENST00000555890 CCKP06307 115 aa4.26□□□□□ -1.73
SLIRP-204ENST00000555890 NDUFV3P56181 108 aaKnown RBP4.26□□□□□ -1.73
SLIRP-204ENST00000555890 DSCR8Q96T75 97 aa4.26□□□□□ -1.73
SLIRP-204ENST00000555890 LOC110117498A0A087WWA1 95 aa4.25□□□□□ -1.73
SLIRP-204ENST00000555890 A0A1B0GV72 72 aa4.25□□□□□ -1.73
SLIRP-204ENST00000555890 SEC61GP60059 68 aa4.25□□□□□ -1.73
SLIRP-204ENST00000555890 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
SLIRP-204ENST00000555890 PHF5AQ7RTV0 110 aaKnown RBP4.25□□□□□ -1.73
SLIRP-204ENST00000555890 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
SLIRP-204ENST00000555890 DEFB105AQ8NG35 78 aa4.25□□□□□ -1.73
SLIRP-204ENST00000555890 SPACA4Q8TDM5 124 aa4.25□□□□□ -1.73
SLIRP-204ENST00000555890 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
SLIRP-204ENST00000555890 H0Y9J4 135 aa4.24□□□□□ -1.73
SLIRP-204ENST00000555890 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
SLIRP-204ENST00000555890 SCGB1A1P11684 91 aa4.23□□□□□ -1.73
SLIRP-204ENST00000555890 LINC00643Q86TS7 51 aa4.23□□□□□ -1.73
SLIRP-204ENST00000555890 Q9BRP9 147 aa4.23□□□□□ -1.73
SLIRP-204ENST00000555890 IGLV5-48A0A075B6I7 105 aa4.22□□□□□ -1.73
SLIRP-204ENST00000555890 MT-ATP8P03928 68 aa4.22□□□□□ -1.73
SLIRP-204ENST00000555890 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
SLIRP-204ENST00000555890 UBE2AP49459 152 aa4.22□□□□□ -1.73
SLIRP-204ENST00000555890 Q6ZQT0 140 aa4.22□□□□□ -1.73
SLIRP-204ENST00000555890 Q8N377 158 aa4.22□□□□□ -1.73
SLIRP-204ENST00000555890 SMCR5Q8TEV8 140 aa4.22□□□□□ -1.73
SLIRP-204ENST00000555890 TRBV7-4A0A0J9YYF1 115 aa4.21□□□□□ -1.74
SLIRP-204ENST00000555890 PANO1I0J062 215 aa4.21□□□□□ -1.74
SLIRP-204ENST00000555890 BCE1O60756 84 aa4.21□□□□□ -1.74
SLIRP-204ENST00000555890 PRLHP81277 87 aa4.21□□□□□ -1.74
SLIRP-204ENST00000555890 HIGD2AQ9BW72 106 aa4.21□□□□□ -1.74
SLIRP-204ENST00000555890 PLAC8Q9NZF1 115 aa4.21□□□□□ -1.74
SLIRP-204ENST00000555890 F8WEM9 126 aa4.2□□□□□ -1.74
SLIRP-204ENST00000555890 ERC2-IT1O76042 136 aa4.2□□□□□ -1.74
SLIRP-204ENST00000555890 FUSP35637 526 aaKnown RBP eCLIP4.2□□□□□ -1.74
SLIRP-204ENST00000555890 LINC01547P58512 204 aaPredicted RBP4.2□□□□□ -1.74
SLIRP-204ENST00000555890 Q6Q795 121 aa4.2□□□□□ -1.74
SLIRP-204ENST00000555890 SMIM29Q86T20 159 aa4.2□□□□□ -1.74
SLIRP-204ENST00000555890 ST20-AS1Q8NBB2 130 aa4.2□□□□□ -1.74
SLIRP-204ENST00000555890 UBL5Q9BZL1 73 aa4.2□□□□□ -1.74
SLIRP-204ENST00000555890 LINC00846Q9NV44 126 aa4.2□□□□□ -1.74
SLIRP-204ENST00000555890 Q6JHZ5 121 aa4.19□□□□□ -1.74
SLIRP-204ENST00000555890 KRTAP11-1Q8IUC1 163 aa4.19□□□□□ -1.74
SLIRP-204ENST00000555890 IMUPQ9GZP8 106 aa4.19□□□□□ -1.74
SLIRP-204ENST00000555890 A0A1B0GW54 56 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms