RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 ETDBQ3ZM63 59 aa5.91□□□□□ -1.46
HNRNPC-220ENST00000555585 LCE4AQ5TA78 99 aa5.91□□□□□ -1.46
HNRNPC-220ENST00000555585 LINC01600Q96MT4 127 aa5.91□□□□□ -1.46
HNRNPC-220ENST00000555585 LRP1BQ9NZR2 4599 aa5.91□□□□□ -1.46
HNRNPC-220ENST00000555585 PKHD1P08F94 4074 aa5.9□□□□□ -1.46
HNRNPC-220ENST00000555585 RPL37AP61513 92 aaKnown RBP5.9□□□□□ -1.46
HNRNPC-220ENST00000555585 LAMTOR3Q9UHA4 124 aa5.9□□□□□ -1.46
HNRNPC-220ENST00000555585 A0A1B0GV72 72 aa5.89□□□□□ -1.47
HNRNPC-220ENST00000555585 H3BS24 57 aa5.89□□□□□ -1.47
HNRNPC-220ENST00000555585 LINC01547P58512 204 aaPredicted RBP5.89□□□□□ -1.47
HNRNPC-220ENST00000555585 TEN1Q86WV5 123 aa5.89□□□□□ -1.47
HNRNPC-220ENST00000555585 Q8N377 158 aa5.89□□□□□ -1.47
HNRNPC-220ENST00000555585 IGLV5-48A0A075B6I7 105 aa5.88□□□□□ -1.47
HNRNPC-220ENST00000555585 TEX49A0A1B0GTD5 131 aa5.88□□□□□ -1.47
HNRNPC-220ENST00000555585 GAGE2AQ6NT46 116 aa5.88□□□□□ -1.47
HNRNPC-220ENST00000555585 PPDPFLQ8WWR9 84 aa5.88□□□□□ -1.47
HNRNPC-220ENST00000555585 ZNF706Q9Y5V0 76 aaPredicted RBP5.88□□□□□ -1.47
HNRNPC-220ENST00000555585 NDUFV3P56181 108 aaKnown RBP5.87□□□□□ -1.47
HNRNPC-220ENST00000555585 SPRR4Q96PI1 79 aa5.86□□□□□ -1.47
HNRNPC-220ENST00000555585 JMJD7-PLA2G4BH0Y9G9 81 aa5.85□□□□□ -1.47
HNRNPC-220ENST00000555585 CDK2AP2O75956 126 aa5.85□□□□□ -1.47
HNRNPC-220ENST00000555585 C3orf22Q8N5N4 141 aa5.85□□□□□ -1.47
HNRNPC-220ENST00000555585 APOBP04114 4563 aaKnown RBP5.84□□□□□ -1.47
HNRNPC-220ENST00000555585 F8WEM9 126 aa5.84□□□□□ -1.47
HNRNPC-220ENST00000555585 RBM3P98179 157 aaKnown RBP5.84□□□□□ -1.47
HNRNPC-220ENST00000555585 SPRR1BP22528 89 aa5.83□□□□□ -1.48
HNRNPC-220ENST00000555585 SMIM29Q86T20 159 aa5.83□□□□□ -1.48
HNRNPC-220ENST00000555585 OBSCN-AS1Q96MR7 158 aa5.83□□□□□ -1.48
HNRNPC-220ENST00000555585 C14orf132Q9NPU4 83 aa5.83□□□□□ -1.48
HNRNPC-220ENST00000555585 DSCR8Q96T75 97 aa5.82□□□□□ -1.48
HNRNPC-220ENST00000555585 J3QR89 54 aa5.81□□□□□ -1.48
HNRNPC-220ENST00000555585 PLA2G1BP04054 148 aaKnown RBP5.81□□□□□ -1.48
HNRNPC-220ENST00000555585 LINC00483Q53H64 154 aa5.81□□□□□ -1.48
HNRNPC-220ENST00000555585 IGLV9-49A0A0B4J1Y8 123 aa5.8□□□□□ -1.48
HNRNPC-220ENST00000555585 SPINK6Q6UWN8 80 aa5.8□□□□□ -1.48
HNRNPC-220ENST00000555585 ANAPC11Q9NYG5 84 aa5.8□□□□□ -1.48
HNRNPC-220ENST00000555585 C9orf153Q5TBE3 101 aa5.79□□□□□ -1.48
HNRNPC-220ENST00000555585 KRTAP4-2Q9BYR5 136 aa5.79□□□□□ -1.48
HNRNPC-220ENST00000555585 LOC110117498A0A087WWA1 95 aa5.78□□□□□ -1.48
HNRNPC-220ENST00000555585 KRTAP9-7A8MTY7 169 aa5.78□□□□□ -1.48
HNRNPC-220ENST00000555585 K7ERU9 68 aa5.78□□□□□ -1.48
HNRNPC-220ENST00000555585 KRTAP10-4P60372 401 aaPredicted RBP5.78□□□□□ -1.48
HNRNPC-220ENST00000555585 Q5VSD8 79 aa5.78□□□□□ -1.48
HNRNPC-220ENST00000555585 VPS25Q9BRG1 176 aa5.78□□□□□ -1.48
HNRNPC-220ENST00000555585 VPS13BQ7Z7G8 4022 aa5.77□□□□□ -1.48
HNRNPC-220ENST00000555585 TRBV7-4A0A0J9YYF1 115 aa5.77□□□□□ -1.49
HNRNPC-220ENST00000555585 CCKP06307 115 aa5.77□□□□□ -1.49
HNRNPC-220ENST00000555585 PDE6GP18545 87 aa5.77□□□□□ -1.49
HNRNPC-220ENST00000555585 Q6ZQT0 140 aa5.77□□□□□ -1.49
HNRNPC-220ENST00000555585 SRRM2Q9UQ35 2752 aaKnown RBP5.76□□□□□ -1.49
HNRNPC-220ENST00000555585 IGLV8-61A0A075B6I0 122 aa5.76□□□□□ -1.49
HNRNPC-220ENST00000555585 EPPK1P58107 5090 aaKnown RBP5.75□□□□□ -1.49
HNRNPC-220ENST00000555585 A0A0G2JQZ4 141 aa5.75□□□□□ -1.49
HNRNPC-220ENST00000555585 MOBPQ13875 183 aa5.75□□□□□ -1.49
HNRNPC-220ENST00000555585 C21orf62-AS1Q17RA5 79 aa5.75□□□□□ -1.49
HNRNPC-220ENST00000555585 Q6JHZ5 121 aa5.75□□□□□ -1.49
HNRNPC-220ENST00000555585 IGFL1Q6UW32 110 aa5.75□□□□□ -1.49
HNRNPC-220ENST00000555585 Q8NBF4 154 aa5.75□□□□□ -1.49
HNRNPC-220ENST00000555585 FAM229BQ4G0N7 80 aa5.74□□□□□ -1.49
HNRNPC-220ENST00000555585 RYR1P21817 5038 aa5.74□□□□□ -1.49
HNRNPC-220ENST00000555585 KRTAP1-4P0C5Y4 121 aa5.73□□□□□ -1.49
HNRNPC-220ENST00000555585 CRYGAP11844 174 aa5.73□□□□□ -1.49
HNRNPC-220ENST00000555585 Q8N1X5 172 aa5.73□□□□□ -1.49
HNRNPC-220ENST00000555585 KRTAP4-11Q9BYQ6 195 aa5.73□□□□□ -1.49
HNRNPC-220ENST00000555585 PKHD1L1Q86WI1 4243 aa5.72□□□□□ -1.49
HNRNPC-220ENST00000555585 A0A087X002 238 aa5.72□□□□□ -1.49
HNRNPC-220ENST00000555585 A0A1W2PNM2 257 aa5.72□□□□□ -1.49
HNRNPC-220ENST00000555585 ACYP1P07311 99 aa5.72□□□□□ -1.49
HNRNPC-220ENST00000555585 HSPG2P98160 4391 aa5.72□□□□□ -1.49
HNRNPC-220ENST00000555585 FAM240AA0A1B0GVK7 77 aa5.71□□□□□ -1.5
HNRNPC-220ENST00000555585 KRTAP13-2Q52LG2 175 aa5.71□□□□□ -1.5
HNRNPC-220ENST00000555585 SSBP3-AS1Q7Z2R9 100 aa5.71□□□□□ -1.5
HNRNPC-220ENST00000555585 HRCT1Q6UXD1 115 aa5.7□□□□□ -1.5
HNRNPC-220ENST00000555585 KRTAP17-1Q9BYP8 105 aa5.7□□□□□ -1.5
HNRNPC-220ENST00000555585 FAT1Q14517 4588 aa5.7□□□□□ -1.5
HNRNPC-220ENST00000555585 PRR26Q8N8Z3 221 aa5.69□□□□□ -1.5
HNRNPC-220ENST00000555585 TYMSOSQ8TAI1 123 aa5.69□□□□□ -1.5
HNRNPC-220ENST00000555585 LINC00846Q9NV44 126 aa5.69□□□□□ -1.5
HNRNPC-220ENST00000555585 A0A1B0GW54 56 aa5.67□□□□□ -1.5
HNRNPC-220ENST00000555585 A0A087WSZ3 146 aa5.66□□□□□ -1.5
HNRNPC-220ENST00000555585 Q6Q795 121 aa5.66□□□□□ -1.5
HNRNPC-220ENST00000555585 UBL5Q9BZL1 73 aa5.66□□□□□ -1.5
HNRNPC-220ENST00000555585 CDIP1Q9H305 208 aa5.66□□□□□ -1.5
HNRNPC-220ENST00000555585 KIAA1109Q2LD37 5005 aa5.66□□□□□ -1.5
HNRNPC-220ENST00000555585 TRBV7-7A0A0K0K1E9 115 aa5.65□□□□□ -1.5
HNRNPC-220ENST00000555585 NREPQ16612 68 aa5.65□□□□□ -1.5
HNRNPC-220ENST00000555585 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.5
HNRNPC-220ENST00000555585 CD164Q04900 197 aa5.64□□□□□ -1.51
HNRNPC-220ENST00000555585 Q6ZVQ6 151 aa5.64□□□□□ -1.51
HNRNPC-220ENST00000555585 BIRC6Q9NR09 4857 aa5.62□□□□□ -1.51
HNRNPC-220ENST00000555585 LINC00643Q86TS7 51 aa5.62□□□□□ -1.51
HNRNPC-220ENST00000555585 LINC00304Q8N9R0 145 aa5.62□□□□□ -1.51
HNRNPC-220ENST00000555585 KRTAP4-5Q9BYR2 181 aa5.62□□□□□ -1.51
HNRNPC-220ENST00000555585 SS18L2Q9UHA2 77 aa5.62□□□□□ -1.51
HNRNPC-220ENST00000555585 IGKV3D-7A0A0C4DH55 119 aa5.6□□□□□ -1.51
HNRNPC-220ENST00000555585 SPAG11AQ6PDA7 123 aa5.59□□□□□ -1.51
HNRNPC-220ENST00000555585 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.51
HNRNPC-220ENST00000555585 SPINK1P00995 79 aa5.58□□□□□ -1.52
HNRNPC-220ENST00000555585 MT-ATP8P03928 68 aa5.58□□□□□ -1.52
HNRNPC-220ENST00000555585 DEFB116Q30KQ4 102 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms