RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 COX6CP09669 75 aa3.87□□□□□ -1.79
LINC00643-203ENST00000555518 SCGB1C2P0DMR2 95 aa3.87□□□□□ -1.79
LINC00643-203ENST00000555518 LINC01547P58512 204 aaPredicted RBP3.87□□□□□ -1.79
LINC00643-203ENST00000555518 LYRM7Q5U5X0 104 aa3.87□□□□□ -1.79
LINC00643-203ENST00000555518 LINC00575Q6W349 94 aa3.87□□□□□ -1.79
LINC00643-203ENST00000555518 SCXQ7RTU7 201 aa3.87□□□□□ -1.79
LINC00643-203ENST00000555518 CIRBP-AS1Q8TBR5 109 aa3.87□□□□□ -1.79
LINC00643-203ENST00000555518 TRACP01848 142 aa3.86□□□□□ -1.79
LINC00643-203ENST00000555518 COX7BP24311 80 aa3.86□□□□□ -1.79
LINC00643-203ENST00000555518 HAMPP81172 84 aa3.86□□□□□ -1.79
LINC00643-203ENST00000555518 ATXN8Q156A1 80 aa3.86□□□□□ -1.79
LINC00643-203ENST00000555518 REG3GQ6UW15 175 aa3.86□□□□□ -1.79
LINC00643-203ENST00000555518 Q6ZRX8 168 aa3.86□□□□□ -1.79
LINC00643-203ENST00000555518 GTF2H5Q6ZYL4 71 aa3.86□□□□□ -1.79
LINC00643-203ENST00000555518 KRTAP13-1Q8IUC0 172 aa3.86□□□□□ -1.79
LINC00643-203ENST00000555518 LINC01600Q96MT4 127 aa3.86□□□□□ -1.79
LINC00643-203ENST00000555518 Q9BRP9 147 aa3.86□□□□□ -1.79
LINC00643-203ENST00000555518 A0A1B0GX51 115 aa3.85□□□□□ -1.79
LINC00643-203ENST00000555518 MTURNQ8N3F0 131 aa3.85□□□□□ -1.79
LINC00643-203ENST00000555518 SMCR5Q8TEV8 140 aa3.85□□□□□ -1.79
LINC00643-203ENST00000555518 CBY1Q9Y3M2 126 aa3.85□□□□□ -1.79
LINC00643-203ENST00000555518 KIAA1109Q2LD37 5005 aa3.84□□□□□ -1.79
LINC00643-203ENST00000555518 XGP55808 180 aa3.84□□□□□ -1.79
LINC00643-203ENST00000555518 UBE2BP63146 152 aa3.84□□□□□ -1.79
LINC00643-203ENST00000555518 PSORS1C2Q9UIG4 136 aa3.84□□□□□ -1.79
LINC00643-203ENST00000555518 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.8
LINC00643-203ENST00000555518 BIRC6Q9NR09 4857 aa3.83□□□□□ -1.8
LINC00643-203ENST00000555518 ETDCA0A1B0GVM5 59 aa3.83□□□□□ -1.8
LINC00643-203ENST00000555518 hADV29S1A0JD25 119 aa3.83□□□□□ -1.8
LINC00643-203ENST00000555518 C9JAW5 83 aa3.83□□□□□ -1.8
LINC00643-203ENST00000555518 H0Y9J4 135 aa3.83□□□□□ -1.8
LINC00643-203ENST00000555518 BCE1O60756 84 aa3.83□□□□□ -1.8
LINC00643-203ENST00000555518 ERC2-IT1O76042 136 aa3.83□□□□□ -1.8
LINC00643-203ENST00000555518 INAFM2P0DMQ5 153 aa3.83□□□□□ -1.8
LINC00643-203ENST00000555518 PRLHP81277 87 aa3.83□□□□□ -1.8
LINC00643-203ENST00000555518 DPH3Q96FX2 82 aa3.83□□□□□ -1.8
LINC00643-203ENST00000555518 H3BT86 120 aa3.82□□□□□ -1.8
LINC00643-203ENST00000555518 SLC25A20O43772 301 aa3.82□□□□□ -1.8
LINC00643-203ENST00000555518 Q6ZQY7 126 aa3.82□□□□□ -1.8
LINC00643-203ENST00000555518 FAM19A1Q7Z5A9 133 aa3.82□□□□□ -1.8
LINC00643-203ENST00000555518 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
LINC00643-203ENST00000555518 DHRS4-AS1Q9P1J3 65 aa3.82□□□□□ -1.8
LINC00643-203ENST00000555518 FAT1Q14517 4588 aa3.82□□□□□ -1.8
LINC00643-203ENST00000555518 HSPG2P98160 4391 aa3.81□□□□□ -1.8
LINC00643-203ENST00000555518 F8W1H4 67 aa3.81□□□□□ -1.8
LINC00643-203ENST00000555518 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
LINC00643-203ENST00000555518 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.81□□□□□ -1.8
LINC00643-203ENST00000555518 ANKRD29Q8N6D5 301 aa3.81□□□□□ -1.8
LINC00643-203ENST00000555518 PKHD1L1Q86WI1 4243 aa3.81□□□□□ -1.8
LINC00643-203ENST00000555518 SRRM2Q9UQ35 2752 aaKnown RBP3.8□□□□□ -1.8
LINC00643-203ENST00000555518 IGLV5-48A0A075B6I7 105 aa3.8□□□□□ -1.8
LINC00643-203ENST00000555518 BAALC-AS2P0C853 105 aa3.8□□□□□ -1.8
LINC00643-203ENST00000555518 KRTAP10-4P60372 401 aaPredicted RBP3.8□□□□□ -1.8
LINC00643-203ENST00000555518 C1orf137Q5JT78 98 aa3.8□□□□□ -1.8
LINC00643-203ENST00000555518 ST20-AS1Q8NBB2 130 aa3.8□□□□□ -1.8
LINC00643-203ENST00000555518 ORMDL1Q9P0S3 153 aa3.8□□□□□ -1.8
LINC00643-203ENST00000555518 ZNF861PO60384 105 aa3.79□□□□□ -1.8
LINC00643-203ENST00000555518 DNAL4O96015 105 aa3.79□□□□□ -1.8
LINC00643-203ENST00000555518 IGLV7-43P04211 117 aa3.79□□□□□ -1.8
LINC00643-203ENST00000555518 UBE2AP49459 152 aa3.79□□□□□ -1.8
LINC00643-203ENST00000555518 ETDBQ3ZM63 59 aa3.79□□□□□ -1.8
LINC00643-203ENST00000555518 Q8N377 158 aa3.79□□□□□ -1.8
LINC00643-203ENST00000555518 OBSCN-AS1Q96MR7 158 aa3.79□□□□□ -1.8
LINC00643-203ENST00000555518 CDK2AP2O75956 126 aa3.78□□□□□ -1.8
LINC00643-203ENST00000555518 SPRR1BP22528 89 aa3.78□□□□□ -1.8
LINC00643-203ENST00000555518 TEN1Q86WV5 123 aa3.78□□□□□ -1.8
LINC00643-203ENST00000555518 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
LINC00643-203ENST00000555518 HIGD2AQ9BW72 106 aa3.78□□□□□ -1.8
LINC00643-203ENST00000555518 OCIAD2Q56VL3 154 aa3.77□□□□□ -1.81
LINC00643-203ENST00000555518 TEX49A0A1B0GTD5 131 aa3.76□□□□□ -1.81
LINC00643-203ENST00000555518 TMEM256-PLSCR3K7ERE1 68 aa3.76□□□□□ -1.81
LINC00643-203ENST00000555518 SNCGO76070 127 aa3.76□□□□□ -1.81
LINC00643-203ENST00000555518 SMR3BP02814 79 aaPredicted RBP3.76□□□□□ -1.81
LINC00643-203ENST00000555518 LINC00483Q53H64 154 aa3.76□□□□□ -1.81
LINC00643-203ENST00000555518 PPDPFLQ8WWR9 84 aa3.76□□□□□ -1.81
LINC00643-203ENST00000555518 SPRR4Q96PI1 79 aa3.76□□□□□ -1.81
LINC00643-203ENST00000555518 H3BQ85 93 aa3.75□□□□□ -1.81
LINC00643-203ENST00000555518 NDUFV3P56181 108 aaKnown RBP3.75□□□□□ -1.81
LINC00643-203ENST00000555518 RPL37AP61513 92 aaKnown RBP3.75□□□□□ -1.81
LINC00643-203ENST00000555518 C3orf22Q8N5N4 141 aa3.75□□□□□ -1.81
LINC00643-203ENST00000555518 HERC2O95714 4834 aa3.75□□□□□ -1.81
LINC00643-203ENST00000555518 IGLV8-61A0A075B6I0 122 aa3.74□□□□□ -1.81
LINC00643-203ENST00000555518 KRTAP1-4P0C5Y4 121 aa3.74□□□□□ -1.81
LINC00643-203ENST00000555518 DEFB105AQ8NG35 78 aa3.74□□□□□ -1.81
LINC00643-203ENST00000555518 ABCA13Q86UQ4 5058 aa3.73□□□□□ -1.81
LINC00643-203ENST00000555518 TRBV7-4A0A0J9YYF1 115 aa3.73□□□□□ -1.81
LINC00643-203ENST00000555518 NOTCH2NLQ7Z3S9 236 aa3.73□□□□□ -1.81
LINC00643-203ENST00000555518 C14orf132Q9NPU4 83 aa3.73□□□□□ -1.81
LINC00643-203ENST00000555518 ANAPC11Q9NYG5 84 aa3.73□□□□□ -1.81
LINC00643-203ENST00000555518 LOC110117498A0A087WWA1 95 aa3.72□□□□□ -1.81
LINC00643-203ENST00000555518 A0A1B0GV72 72 aa3.72□□□□□ -1.81
LINC00643-203ENST00000555518 JMJD7-PLA2G4BH0Y9G9 81 aa3.72□□□□□ -1.81
LINC00643-203ENST00000555518 Q6ZQT0 140 aa3.72□□□□□ -1.81
LINC00643-203ENST00000555518 LAMTOR3Q9UHA4 124 aa3.72□□□□□ -1.81
LINC00643-203ENST00000555518 A0A087X002 238 aa3.71□□□□□ -1.82
LINC00643-203ENST00000555518 RBM3P98179 157 aaKnown RBP3.71□□□□□ -1.82
LINC00643-203ENST00000555518 ZNF706Q9Y5V0 76 aaPredicted RBP3.71□□□□□ -1.82
LINC00643-203ENST00000555518 A0A0G2JQZ4 141 aa3.7□□□□□ -1.82
LINC00643-203ENST00000555518 KRTAP13-2Q52LG2 175 aa3.7□□□□□ -1.82
LINC00643-203ENST00000555518 SPINK6Q6UWN8 80 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms