RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 UBE2AP49459 152 aa13.22□□□□□ -0.29
ARHGEF40-204ENST00000555038 SPACA4Q8TDM5 124 aa13.22□□□□□ -0.29
ARHGEF40-204ENST00000555038 CYSTM1Q9H1C7 97 aa13.22□□□□□ -0.29
ARHGEF40-204ENST00000555038 PRKDCP78527 4128 aaKnown RBP13.22□□□□□ -0.29
ARHGEF40-204ENST00000555038 Q6ZR54 194 aa13.2□□□□□ -0.3
ARHGEF40-204ENST00000555038 C20orf197Q8N268 126 aa13.2□□□□□ -0.3
ARHGEF40-204ENST00000555038 Q8N9L7 120 aa13.2□□□□□ -0.3
ARHGEF40-204ENST00000555038 TENM2Q9NT68 2774 aa13.19□□□□□ -0.3
ARHGEF40-204ENST00000555038 KLKP1Q107X0 134 aa13.18□□□□□ -0.3
ARHGEF40-204ENST00000555038 PANO1I0J062 215 aa13.17□□□□□ -0.3
ARHGEF40-204ENST00000555038 KRTAP13-1Q8IUC0 172 aa13.17□□□□□ -0.3
ARHGEF40-204ENST00000555038 DPH3Q96FX2 82 aa13.17□□□□□ -0.3
ARHGEF40-204ENST00000555038 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF40-204ENST00000555038 DSCR10P59022 87 aa13.12□□□□□ -0.31
ARHGEF40-204ENST00000555038 RPS28P62857 69 aaKnown RBP13.12□□□□□ -0.31
ARHGEF40-204ENST00000555038 RTL8CO15255 209 aa13.12□□□□□ -0.31
ARHGEF40-204ENST00000555038 OCR1Q9BZK8 76 aa13.11□□□□□ -0.31
ARHGEF40-204ENST00000555038 J3KT08 172 aa13.09□□□□□ -0.31
ARHGEF40-204ENST00000555038 DNAH17Q9UFH2 4485 aa13.09□□□□□ -0.31
ARHGEF40-204ENST00000555038 NDUFC1O43677 76 aa13.09□□□□□ -0.31
ARHGEF40-204ENST00000555038 A0A087WSZ3 146 aa13.07□□□□□ -0.32
ARHGEF40-204ENST00000555038 C1orf134Q5TEV5 83 aa13.06□□□□□ -0.32
ARHGEF40-204ENST00000555038 H7BZZ5 65 aa13.05□□□□□ -0.32
ARHGEF40-204ENST00000555038 PLAC8Q9NZF1 115 aa13.05□□□□□ -0.32
ARHGEF40-204ENST00000555038 A0A0G2JQZ4 141 aa13.04□□□□□ -0.32
ARHGEF40-204ENST00000555038 K7EQZ3 153 aa13.04□□□□□ -0.32
ARHGEF40-204ENST00000555038 DNAH2Q9P225 4427 aa13.04□□□□□ -0.32
ARHGEF40-204ENST00000555038 TMEM254Q8TBM7 123 aa13.02□□□□□ -0.32
ARHGEF40-204ENST00000555038 ZNF706Q9Y5V0 76 aaPredicted RBP13.02□□□□□ -0.32
ARHGEF40-204ENST00000555038 RPL37AP61513 92 aaKnown RBP13.02□□□□□ -0.33
ARHGEF40-204ENST00000555038 LINC00483Q53H64 154 aa13.01□□□□□ -0.33
ARHGEF40-204ENST00000555038 IGLV5-52A0A0A0MRZ9 124 aa13□□□□□ -0.33
ARHGEF40-204ENST00000555038 SNURFQ9Y675 71 aa13□□□□□ -0.33
ARHGEF40-204ENST00000555038 DNAH6Q9C0G6 4158 aa13□□□□□ -0.33
ARHGEF40-204ENST00000555038 HECTD4Q9Y4D8 3996 aa13□□□□□ -0.33
ARHGEF40-204ENST00000555038 FAM236DA0A1B0GTK5 79 aa12.99□□□□□ -0.33
ARHGEF40-204ENST00000555038 FAM236CP0DP71 79 aa12.99□□□□□ -0.33
ARHGEF40-204ENST00000555038 HCG22E2RYF7 251 aa12.99□□□□□ -0.33
ARHGEF40-204ENST00000555038 PSORS1C2Q9UIG4 136 aa12.96□□□□□ -0.34
ARHGEF40-204ENST00000555038 A0A0U1RQV1 116 aa12.95□□□□□ -0.34
ARHGEF40-204ENST00000555038 LCE6AA0A183 80 aa12.95□□□□□ -0.34
ARHGEF40-204ENST00000555038 KMT2AQ03164 3969 aa12.93□□□□□ -0.34
ARHGEF40-204ENST00000555038 LY6G6CO95867 125 aa12.93□□□□□ -0.34
ARHGEF40-204ENST00000555038 ATP5EP56381 51 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF40-204ENST00000555038 LINC00472Q9H8W2 130 aa12.93□□□□□ -0.34
ARHGEF40-204ENST00000555038 TGP01266 2768 aa12.93□□□□□ -0.34
ARHGEF40-204ENST00000555038 ZNF861PO60384 105 aa12.92□□□□□ -0.34
ARHGEF40-204ENST00000555038 FAM30AQ9NZY2 134 aa12.91□□□□□ -0.34
ARHGEF40-204ENST00000555038 DEFB116Q30KQ4 102 aa12.89□□□□□ -0.35
ARHGEF40-204ENST00000555038 A8MWP4 228 aa12.89□□□□□ -0.35
ARHGEF40-204ENST00000555038 PRR15Q8IV56 129 aa12.87□□□□□ -0.35
ARHGEF40-204ENST00000555038 DNAH8Q96JB1 4490 aa12.87□□□□□ -0.35
ARHGEF40-204ENST00000555038 WWC2-AS2Q96NR7 200 aa12.86□□□□□ -0.35
ARHGEF40-204ENST00000555038 IGLV9-49A0A0B4J1Y8 123 aa12.86□□□□□ -0.35
ARHGEF40-204ENST00000555038 C5orf47Q569G3 176 aa12.86□□□□□ -0.35
ARHGEF40-204ENST00000555038 SERP1Q9Y6X1 66 aa12.86□□□□□ -0.35
ARHGEF40-204ENST00000555038 SRRM2Q9UQ35 2752 aaKnown RBP12.84□□□□□ -0.35
ARHGEF40-204ENST00000555038 KRTAP29-1A8MX34 341 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF40-204ENST00000555038 ALMS1Q8TCU4 4167 aa12.82□□□□□ -0.36
ARHGEF40-204ENST00000555038 IGLV7-43P04211 117 aa12.79□□□□□ -0.36
ARHGEF40-204ENST00000555038 WFDC13Q8IUB5 93 aa12.79□□□□□ -0.36
ARHGEF40-204ENST00000555038 OXTP01178 125 aa12.79□□□□□ -0.36
ARHGEF40-204ENST00000555038 NDUFB1O75438 58 aa12.78□□□□□ -0.36
ARHGEF40-204ENST00000555038 CASC2Q6XLA1 102 aa12.78□□□□□ -0.36
ARHGEF40-204ENST00000555038 ZCCHC13Q8WW36 166 aaKnown RBP12.77□□□□□ -0.36
ARHGEF40-204ENST00000555038 MOBPQ13875 183 aa12.76□□□□□ -0.37
ARHGEF40-204ENST00000555038 Q96NJ1 140 aa12.74□□□□□ -0.37
ARHGEF40-204ENST00000555038 DNAH11Q96DT5 4516 aa12.73□□□□□ -0.37
ARHGEF40-204ENST00000555038 DNAH5Q8TE73 4624 aa12.73□□□□□ -0.37
ARHGEF40-204ENST00000555038 MP68P56378 58 aa12.71□□□□□ -0.37
ARHGEF40-204ENST00000555038 KRTAP10-2P60368 255 aa12.71□□□□□ -0.38
ARHGEF40-204ENST00000555038 CIRBP-AS1Q8TBR5 109 aa12.7□□□□□ -0.38
ARHGEF40-204ENST00000555038 MMP24-AS1A0A0U1RRL7 71 aa12.69□□□□□ -0.38
ARHGEF40-204ENST00000555038 H3BPC8 53 aa12.69□□□□□ -0.38
ARHGEF40-204ENST00000555038 FRAS1Q86XX4 4008 aa12.69□□□□□ -0.38
ARHGEF40-204ENST00000555038 Q6ZSA8 131 aa12.68□□□□□ -0.38
ARHGEF40-204ENST00000555038 HRCT1Q6UXD1 115 aa12.66□□□□□ -0.38
ARHGEF40-204ENST00000555038 ANAPC11Q9NYG5 84 aa12.66□□□□□ -0.38
ARHGEF40-204ENST00000555038 CD164Q04900 197 aa12.65□□□□□ -0.38
ARHGEF40-204ENST00000555038 ASB16-AS1Q495Z4 193 aa12.64□□□□□ -0.39
ARHGEF40-204ENST00000555038 hDV103S1A0JD37 113 aa12.64□□□□□ -0.39
ARHGEF40-204ENST00000555038 SSBP3-AS1Q7Z2R9 100 aa12.64□□□□□ -0.39
ARHGEF40-204ENST00000555038 SMIM26A0A096LP01 95 aa12.61□□□□□ -0.39
ARHGEF40-204ENST00000555038 CDK2AP2O75956 126 aa12.61□□□□□ -0.39
ARHGEF40-204ENST00000555038 A0A1B0GVX0 72 aa12.6□□□□□ -0.39
ARHGEF40-204ENST00000555038 C8orf17Q9NRJ1 99 aa12.6□□□□□ -0.39
ARHGEF40-204ENST00000555038 H0Y9P7 68 aa12.59□□□□□ -0.39
ARHGEF40-204ENST00000555038 TP53AIP1Q9HCN2 124 aa12.58□□□□□ -0.39
ARHGEF40-204ENST00000555038 Q5XG85 94 aa12.58□□□□□ -0.4
ARHGEF40-204ENST00000555038 TRAV22A0A0B4J277 110 aa12.57□□□□□ -0.4
ARHGEF40-204ENST00000555038 KRTAP10-1P60331 282 aa12.57□□□□□ -0.4
ARHGEF40-204ENST00000555038 FAT2Q9NYQ8 4349 aa12.57□□□□□ -0.4
ARHGEF40-204ENST00000555038 LINC00208Q96KT6 92 aa12.56□□□□□ -0.4
ARHGEF40-204ENST00000555038 PKD1P98161 4303 aa12.54□□□□□ -0.4
ARHGEF40-204ENST00000555038 CYP4F30PQ9H0H9 118 aa12.53□□□□□ -0.4
ARHGEF40-204ENST00000555038 FAM229BQ4G0N7 80 aa12.53□□□□□ -0.4
ARHGEF40-204ENST00000555038 IGHV6-1A0A0B4J1U7 121 aa12.51□□□□□ -0.41
ARHGEF40-204ENST00000555038 HYDINQ4G0P3 5121 aa12.49□□□□□ -0.41
ARHGEF40-204ENST00000555038 SVIPQ8NHG7 77 aa12.49□□□□□ -0.41
ARHGEF40-204ENST00000555038 SPANXA2-OT1Q8N9U9 137 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms