RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 H0Y9P7 68 aa5.68□□□□□ -1.5
SYNE2-217ENST00000555022 KRTAP26-1Q6PEX3 210 aa5.68□□□□□ -1.5
SYNE2-217ENST00000555022 H3BQ85 93 aa5.68□□□□□ -1.5
SYNE2-217ENST00000555022 DEFB131BA0A096LNP1 70 aa5.67□□□□□ -1.5
SYNE2-217ENST00000555022 IGFL1Q6UW32 110 aa5.67□□□□□ -1.5
SYNE2-217ENST00000555022 B9D2Q9BPU9 175 aa5.67□□□□□ -1.5
SYNE2-217ENST00000555022 KCNQ1DNQ9H478 68 aa5.67□□□□□ -1.5
SYNE2-217ENST00000555022 IGLV5-48A0A075B6I7 105 aa5.66□□□□□ -1.5
SYNE2-217ENST00000555022 CHTF8P0CG12 524 aa5.66□□□□□ -1.5
SYNE2-217ENST00000555022 KRTAP7-1Q8IUC3 87 aa5.66□□□□□ -1.5
SYNE2-217ENST00000555022 NDUFS5O43920 106 aa5.66□□□□□ -1.5
SYNE2-217ENST00000555022 Q5VV11 94 aa5.65□□□□□ -1.5
SYNE2-217ENST00000555022 DHRS4-AS1Q9P1J3 65 aa5.65□□□□□ -1.5
SYNE2-217ENST00000555022 SPAG11AQ6PDA7 123 aa5.65□□□□□ -1.51
SYNE2-217ENST00000555022 CD164Q04900 197 aa5.64□□□□□ -1.51
SYNE2-217ENST00000555022 CASC2Q6XLA1 102 aa5.64□□□□□ -1.51
SYNE2-217ENST00000555022 IGLV1-50A0A075B6I6 118 aa5.64□□□□□ -1.51
SYNE2-217ENST00000555022 UBE2AP49459 152 aa5.64□□□□□ -1.51
SYNE2-217ENST00000555022 PRR15Q8IV56 129 aa5.64□□□□□ -1.51
SYNE2-217ENST00000555022 Q1T7F1 81 aa5.63□□□□□ -1.51
SYNE2-217ENST00000555022 ZCCHC13Q8WW36 166 aaKnown RBP5.63□□□□□ -1.51
SYNE2-217ENST00000555022 C16orf90A8MZG2 172 aa5.63□□□□□ -1.51
SYNE2-217ENST00000555022 REG3GQ6UW15 175 aa5.62□□□□□ -1.51
SYNE2-217ENST00000555022 C11orf45Q8TAV5 145 aa5.62□□□□□ -1.51
SYNE2-217ENST00000555022 H3BS24 57 aa5.61□□□□□ -1.51
SYNE2-217ENST00000555022 IGLV9-49A0A0B4J1Y8 123 aa5.61□□□□□ -1.51
SYNE2-217ENST00000555022 TNP2Q05952 138 aa5.61□□□□□ -1.51
SYNE2-217ENST00000555022 PHF5AQ7RTV0 110 aaKnown RBP5.6□□□□□ -1.51
SYNE2-217ENST00000555022 KRTAP10-11P60412 298 aa5.59□□□□□ -1.51
SYNE2-217ENST00000555022 Q8N9P0 234 aaPredicted RBP5.59□□□□□ -1.51
SYNE2-217ENST00000555022 LCA10Q71F78 164 aa5.59□□□□□ -1.51
SYNE2-217ENST00000555022 COA5Q86WW8 74 aa5.59□□□□□ -1.51
SYNE2-217ENST00000555022 KRTAP4-16G5E9R7 235 aaPredicted RBP5.58□□□□□ -1.52
SYNE2-217ENST00000555022 KRTAP11-1Q8IUC1 163 aa5.58□□□□□ -1.52
SYNE2-217ENST00000555022 CNBPP62633 177 aaKnown RBP5.58□□□□□ -1.52
SYNE2-217ENST00000555022 SPRR4Q96PI1 79 aa5.58□□□□□ -1.52
SYNE2-217ENST00000555022 LINC00588Q9Y4M8 146 aa5.58□□□□□ -1.52
SYNE2-217ENST00000555022 RETNLBQ9BQ08 111 aa5.57□□□□□ -1.52
SYNE2-217ENST00000555022 RBM12B-AS1Q9P1G2 102 aa5.57□□□□□ -1.52
SYNE2-217ENST00000555022 LINC01556Q5JQF7 62 aa5.56□□□□□ -1.52
SYNE2-217ENST00000555022 ANAPC11Q9NYG5 84 aa5.56□□□□□ -1.52
SYNE2-217ENST00000555022 LCE6AA0A183 80 aa5.55□□□□□ -1.52
SYNE2-217ENST00000555022 IGHV6-1A0A0B4J1U7 121 aa5.55□□□□□ -1.52
SYNE2-217ENST00000555022 NDUFB1O75438 58 aa5.55□□□□□ -1.52
SYNE2-217ENST00000555022 SPINK6Q6UWN8 80 aa5.55□□□□□ -1.52
SYNE2-217ENST00000555022 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
SYNE2-217ENST00000555022 DNAH10Q8IVF4 4471 aa5.55□□□□□ -1.52
SYNE2-217ENST00000555022 CYP4F30PQ9H0H9 118 aa5.54□□□□□ -1.52
SYNE2-217ENST00000555022 ANK2Q01484 3957 aa5.54□□□□□ -1.52
SYNE2-217ENST00000555022 K7EIL1 84 aa5.53□□□□□ -1.52
SYNE2-217ENST00000555022 SPINK7P58062 85 aa5.53□□□□□ -1.52
SYNE2-217ENST00000555022 SPRR1AP35321 89 aa5.52□□□□□ -1.53
SYNE2-217ENST00000555022 PRR26Q8N8Z3 221 aa5.52□□□□□ -1.53
SYNE2-217ENST00000555022 LYSTQ99698 3801 aa5.52□□□□□ -1.53
SYNE2-217ENST00000555022 MDFIQ99750 246 aa5.52□□□□□ -1.53
SYNE2-217ENST00000555022 KTN1-AS1Q86SY8 53 aa5.5□□□□□ -1.53
SYNE2-217ENST00000555022 KRTAP1-5Q9BYS1 174 aa5.5□□□□□ -1.53
SYNE2-217ENST00000555022 KRTAP29-1A8MX34 341 aaPredicted RBP5.5□□□□□ -1.53
SYNE2-217ENST00000555022 ADM2Q7Z4H4 148 aa5.49□□□□□ -1.53
SYNE2-217ENST00000555022 LIMD2Q9BT23 127 aa5.49□□□□□ -1.53
SYNE2-217ENST00000555022 A8MWP4 228 aa5.49□□□□□ -1.53
SYNE2-217ENST00000555022 DNAH10OSP0CZ25 163 aa5.49□□□□□ -1.53
SYNE2-217ENST00000555022 A0A087X002 238 aa5.48□□□□□ -1.53
SYNE2-217ENST00000555022 NOTCH2NLQ7Z3S9 236 aa5.48□□□□□ -1.53
SYNE2-217ENST00000555022 UBE2DNLQ8IWF7 75 aa5.48□□□□□ -1.53
SYNE2-217ENST00000555022 PANO1I0J062 215 aa5.47□□□□□ -1.53
SYNE2-217ENST00000555022 MOBPQ13875 183 aa5.47□□□□□ -1.53
SYNE2-217ENST00000555022 MMP24-AS1A0A0U1RRL7 71 aa5.47□□□□□ -1.53
SYNE2-217ENST00000555022 LOC101927531A0A1B0GV80 90 aa5.46□□□□□ -1.54
SYNE2-217ENST00000555022 TLX1NBP0CAT3 122 aa5.45□□□□□ -1.54
SYNE2-217ENST00000555022 C9orf163Q8N9P6 203 aa5.45□□□□□ -1.54
SYNE2-217ENST00000555022 LINC00472Q9H8W2 130 aa5.44□□□□□ -1.54
SYNE2-217ENST00000555022 IGLV8-61A0A075B6I0 122 aa5.44□□□□□ -1.54
SYNE2-217ENST00000555022 CDK2AP2O75956 126 aa5.44□□□□□ -1.54
SYNE2-217ENST00000555022 HRES1P13985 223 aa5.44□□□□□ -1.54
SYNE2-217ENST00000555022 IGLV5-37A0A075B6J1 123 aa5.42□□□□□ -1.54
SYNE2-217ENST00000555022 Q75L30 129 aa5.42□□□□□ -1.54
SYNE2-217ENST00000555022 PLA2G2DQ9UNK4 145 aa5.42□□□□□ -1.54
SYNE2-217ENST00000555022 A6NN06 94 aa5.42□□□□□ -1.54
SYNE2-217ENST00000555022 ATP11AUNQ6ZP68 121 aa5.42□□□□□ -1.54
SYNE2-217ENST00000555022 A0A1B0GW54 56 aa5.42□□□□□ -1.54
SYNE2-217ENST00000555022 H3BNG1 76 aa5.42□□□□□ -1.54
SYNE2-217ENST00000555022 SPANXA2-OT1Q8N9U9 137 aa5.41□□□□□ -1.54
SYNE2-217ENST00000555022 CDC42SE1Q9NRR8 79 aa5.4□□□□□ -1.54
SYNE2-217ENST00000555022 C8orf17Q9NRJ1 99 aa5.4□□□□□ -1.55
SYNE2-217ENST00000555022 TGP01266 2768 aa5.4□□□□□ -1.55
SYNE2-217ENST00000555022 IGLV7-46A0A075B6I9 117 aa5.39□□□□□ -1.55
SYNE2-217ENST00000555022 C8orf87E5RJ46 101 aa5.39□□□□□ -1.55
SYNE2-217ENST00000555022 FLG2Q5D862 2391 aaPredicted RBP5.38□□□□□ -1.55
SYNE2-217ENST00000555022 LINC00313P59037 77 aa5.38□□□□□ -1.55
SYNE2-217ENST00000555022 C7orf65Q6ZTY9 151 aa5.38□□□□□ -1.55
SYNE2-217ENST00000555022 Q5W150 140 aa5.37□□□□□ -1.55
SYNE2-217ENST00000555022 CIRBP-AS1Q8TBR5 109 aa5.36□□□□□ -1.55
SYNE2-217ENST00000555022 FBN3Q75N90 2809 aa5.36□□□□□ -1.55
SYNE2-217ENST00000555022 KRTAP24-1Q3LI83 254 aa5.36□□□□□ -1.55
SYNE2-217ENST00000555022 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.36□□□□□ -1.55
SYNE2-217ENST00000555022 SPINK1P00995 79 aa5.35□□□□□ -1.55
SYNE2-217ENST00000555022 H3BPC8 53 aa5.34□□□□□ -1.55
SYNE2-217ENST00000555022 LINC01558Q9Y6Z2 57 aa5.34□□□□□ -1.55
SYNE2-217ENST00000555022 Q96NJ1 140 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms