RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 FCER1GP30273 86 aa1.76□□□□□ -2.13
PSEN1-211ENST00000554995 CKS2P33552 79 aa1.76□□□□□ -2.13
PSEN1-211ENST00000554995 SNRPD3P62318 126 aaKnown RBP1.76□□□□□ -2.13
PSEN1-211ENST00000554995 SPATA45Q537H7 98 aa1.76□□□□□ -2.13
PSEN1-211ENST00000554995 COL5A1-AS1Q5SY13 56 aa1.76□□□□□ -2.13
PSEN1-211ENST00000554995 Q8N8P6 123 aa1.76□□□□□ -2.13
PSEN1-211ENST00000554995 AP1S3Q96PC3 154 aa1.76□□□□□ -2.13
PSEN1-211ENST00000554995 RHPN1-AS1Q9BWJ2 59 aa1.76□□□□□ -2.13
PSEN1-211ENST00000554995 AGPAT4-IT1Q9H0P7 198 aa1.76□□□□□ -2.13
PSEN1-211ENST00000554995 PRO1933Q9H354 126 aa1.76□□□□□ -2.13
PSEN1-211ENST00000554995 D6R8Y8 96 aa1.75□□□□□ -2.13
PSEN1-211ENST00000554995 COX8AP10176 69 aa1.75□□□□□ -2.13
PSEN1-211ENST00000554995 PLNP26678 52 aa1.75□□□□□ -2.13
PSEN1-211ENST00000554995 ASIPP42127 132 aa1.75□□□□□ -2.13
PSEN1-211ENST00000554995 BLCAPP62952 87 aa1.75□□□□□ -2.13
PSEN1-211ENST00000554995 SEC11AP67812 179 aa1.75□□□□□ -2.13
PSEN1-211ENST00000554995 DEFB112Q30KQ8 113 aa1.75□□□□□ -2.13
PSEN1-211ENST00000554995 CASC2Q6XLA1 102 aa1.75□□□□□ -2.13
PSEN1-211ENST00000554995 SNHG12Q9BXW3 62 aa1.75□□□□□ -2.13
PSEN1-211ENST00000554995 DPH3P1Q9H4G8 78 aa1.75□□□□□ -2.13
PSEN1-211ENST00000554995 HIGD1BQ9P298 99 aa1.75□□□□□ -2.13
PSEN1-211ENST00000554995 UQCRQO14949 82 aa1.74□□□□□ -2.13
PSEN1-211ENST00000554995 EVI2AP22794 236 aa1.74□□□□□ -2.13
PSEN1-211ENST00000554995 IFI27P40305 119 aaPredicted RBP1.74□□□□□ -2.13
PSEN1-211ENST00000554995 SPANXN1Q5VSR9 72 aa1.74□□□□□ -2.13
PSEN1-211ENST00000554995 IFI27L1Q96BM0 104 aa1.74□□□□□ -2.13
PSEN1-211ENST00000554995 SMIM2Q9BVW6 85 aa1.74□□□□□ -2.13
PSEN1-211ENST00000554995 C22orf24Q9Y442 160 aa1.74□□□□□ -2.13
PSEN1-211ENST00000554995 HERC1Q15751 4861 aa1.74□□□□□ -2.13
PSEN1-211ENST00000554995 H3BVH4 76 aa1.73□□□□□ -2.13
PSEN1-211ENST00000554995 IGHV3-33P01772 117 aa1.73□□□□□ -2.13
PSEN1-211ENST00000554995 POLR2KP53803 58 aaKnown RBP1.73□□□□□ -2.13
PSEN1-211ENST00000554995 HSD52Q0P140 79 aa1.73□□□□□ -2.13
PSEN1-211ENST00000554995 RHOHQ15669 191 aa1.73□□□□□ -2.13
PSEN1-211ENST00000554995 TMEM141Q96I45 108 aa1.73□□□□□ -2.13
PSEN1-211ENST00000554995 VPS13DQ5THJ4 4388 aa1.73□□□□□ -2.13
PSEN1-211ENST00000554995 LYSTQ99698 3801 aa1.72□□□□□ -2.13
PSEN1-211ENST00000554995 DNAH9Q9NYC9 4486 aa1.72□□□□□ -2.13
PSEN1-211ENST00000554995 LOC107984156A0A0G2JMH3 177 aa1.72□□□□□ -2.13
PSEN1-211ENST00000554995 LCE6AA0A183 80 aa1.72□□□□□ -2.13
PSEN1-211ENST00000554995 A0A1B0GV90 55 aa1.72□□□□□ -2.13
PSEN1-211ENST00000554995 F8VRH5 84 aa1.72□□□□□ -2.13
PSEN1-211ENST00000554995 JMJD7-PLA2G4BH0Y9G9 81 aa1.72□□□□□ -2.13
PSEN1-211ENST00000554995 NCR2O95944 276 aa1.72□□□□□ -2.13
PSEN1-211ENST00000554995 IGKCP01834 107 aa1.72□□□□□ -2.13
PSEN1-211ENST00000554995 KRTAP10-4P60372 401 aaPredicted RBP1.72□□□□□ -2.13
PSEN1-211ENST00000554995 BVES-AS1Q5T3Y7 98 aa1.72□□□□□ -2.13
PSEN1-211ENST00000554995 ARL17AQ8IVW1 177 aa1.72□□□□□ -2.13
PSEN1-211ENST00000554995 WFDC10AQ9H1F0 79 aa1.72□□□□□ -2.13
PSEN1-211ENST00000554995 CSMD3Q7Z407 3707 aa1.71□□□□□ -2.14
PSEN1-211ENST00000554995 DNAH7Q8WXX0 4024 aa1.71□□□□□ -2.14
PSEN1-211ENST00000554995 KIAA1109Q2LD37 5005 aa1.71□□□□□ -2.14
PSEN1-211ENST00000554995 TRAV12-3A0A0B4J271 114 aa1.71□□□□□ -2.14
PSEN1-211ENST00000554995 TRBV10-1A0A0K0K1A3 114 aa1.71□□□□□ -2.14
PSEN1-211ENST00000554995 IGIPA6NJ69 53 aa1.71□□□□□ -2.14
PSEN1-211ENST00000554995 K7EP13 123 aa1.71□□□□□ -2.14
PSEN1-211ENST00000554995 M0QY20 66 aa1.71□□□□□ -2.14
PSEN1-211ENST00000554995 M0R2P5 195 aa1.71□□□□□ -2.14
PSEN1-211ENST00000554995 DEFB114Q30KQ6 69 aa1.71□□□□□ -2.14
PSEN1-211ENST00000554995 ATOH7Q8N100 152 aa1.71□□□□□ -2.14
PSEN1-211ENST00000554995 DYNLRB2Q8TF09 96 aa1.71□□□□□ -2.14
PSEN1-211ENST00000554995 MRPL35Q9NZE8 188 aaKnown RBP1.71□□□□□ -2.14
PSEN1-211ENST00000554995 ABCA13Q86UQ4 5058 aa1.71□□□□□ -2.14
PSEN1-211ENST00000554995 TRBV25-1A0A075B6N4 114 aa1.7□□□□□ -2.14
PSEN1-211ENST00000554995 I3L3M4 83 aa1.7□□□□□ -2.14
PSEN1-211ENST00000554995 GTF2H5Q6ZYL4 71 aa1.7□□□□□ -2.14
PSEN1-211ENST00000554995 HECTD4Q9Y4D8 3996 aa1.69□□□□□ -2.14
PSEN1-211ENST00000554995 HUWE1Q7Z6Z7 4374 aaKnown RBP1.69□□□□□ -2.14
PSEN1-211ENST00000554995 MYMXA0A1B0GTQ4 84 aa1.69□□□□□ -2.14
PSEN1-211ENST00000554995 MGPP08493 103 aa1.69□□□□□ -2.14
PSEN1-211ENST00000554995 SMIM13P0DJ93 91 aa1.69□□□□□ -2.14
PSEN1-211ENST00000554995 DEFB131AP59861 70 aa1.69□□□□□ -2.14
PSEN1-211ENST00000554995 CKS1BP61024 79 aa1.69□□□□□ -2.14
PSEN1-211ENST00000554995 ZNF56Q15929 161 aa1.69□□□□□ -2.14
PSEN1-211ENST00000554995 SPINK13Q1W4C9 94 aa1.69□□□□□ -2.14
PSEN1-211ENST00000554995 CFAP126Q5VTH2 177 aa1.69□□□□□ -2.14
PSEN1-211ENST00000554995 C10orf99Q6UWK7 81 aa1.69□□□□□ -2.14
PSEN1-211ENST00000554995 NDUFA11Q86Y39 141 aa1.69□□□□□ -2.14
PSEN1-211ENST00000554995 TMEM263Q8WUH6 116 aaKnown RBP1.69□□□□□ -2.14
PSEN1-211ENST00000554995 RPL39LQ96EH5 51 aaKnown RBP1.69□□□□□ -2.14
PSEN1-211ENST00000554995 AMELXQ99217 191 aa1.69□□□□□ -2.14
PSEN1-211ENST00000554995 PLECQ15149 4684 aaKnown RBP1.69□□□□□ -2.14
PSEN1-211ENST00000554995 TRBV7-3A0A075B6L6 115 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 TRAV12-2A0A075B6T6 113 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 TRAV23DV6A0A075B6W5 121 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 A0A1W2PPM0 123 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 K7EP34 96 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 K7ERU9 68 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 UBE2D1P51668 147 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 DEFB1P60022 68 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 DEFB136Q30KP8 78 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 SFTA2Q6UW10 78 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 COPS9Q8WXC6 57 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 LINC01600Q96MT4 127 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 LIMD2Q9BT23 127 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 TIMM8BQ9Y5J9 83 aaPredicted RBP1.68□□□□□ -2.14
PSEN1-211ENST00000554995 DNAH17Q9UFH2 4485 aa1.68□□□□□ -2.14
PSEN1-211ENST00000554995 SRRM2Q9UQ35 2752 aaKnown RBP1.68□□□□□ -2.14
PSEN1-211ENST00000554995 DNAH2Q9P225 4427 aa1.67□□□□□ -2.14
PSEN1-211ENST00000554995 DNAH6Q9C0G6 4158 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms