RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 NDUFS5O43920 106 aa7.57□□□□□ -1.2
XRCC3-208ENST00000554811 LINC00208Q96KT6 92 aa7.57□□□□□ -1.2
XRCC3-208ENST00000554811 NDUFC1O43677 76 aa7.56□□□□□ -1.2
XRCC3-208ENST00000554811 FAM229BQ4G0N7 80 aa7.56□□□□□ -1.2
XRCC3-208ENST00000554811 CD164Q04900 197 aa7.56□□□□□ -1.2
XRCC3-208ENST00000554811 FP248Q71RG6 208 aaPredicted RBP7.56□□□□□ -1.2
XRCC3-208ENST00000554811 KRTAP1-5Q9BYS1 174 aa7.56□□□□□ -1.2
XRCC3-208ENST00000554811 IGFL1Q6UW32 110 aa7.55□□□□□ -1.2
XRCC3-208ENST00000554811 KRTAP7-1Q8IUC3 87 aa7.55□□□□□ -1.2
XRCC3-208ENST00000554811 OCR1Q9BZK8 76 aa7.54□□□□□ -1.2
XRCC3-208ENST00000554811 IGLV5-48A0A075B6I7 105 aa7.54□□□□□ -1.2
XRCC3-208ENST00000554811 HCG22E2RYF7 251 aa7.53□□□□□ -1.2
XRCC3-208ENST00000554811 EPM2AB3EWF7 344 aa7.53□□□□□ -1.2
XRCC3-208ENST00000554811 MP68P56378 58 aa7.53□□□□□ -1.2
XRCC3-208ENST00000554811 DSCR10P59022 87 aa7.52□□□□□ -1.21
XRCC3-208ENST00000554811 ANK2Q01484 3957 aa7.52□□□□□ -1.21
XRCC3-208ENST00000554811 BCE1O60756 84 aa7.51□□□□□ -1.21
XRCC3-208ENST00000554811 CDK2AP2O75956 126 aa7.51□□□□□ -1.21
XRCC3-208ENST00000554811 SPINK6Q6UWN8 80 aa7.51□□□□□ -1.21
XRCC3-208ENST00000554811 MDFIQ99750 246 aa7.5□□□□□ -1.21
XRCC3-208ENST00000554811 TGP01266 2768 aa7.49□□□□□ -1.21
XRCC3-208ENST00000554811 B9D2Q9BPU9 175 aa7.49□□□□□ -1.21
XRCC3-208ENST00000554811 ANAPC11Q9NYG5 84 aa7.49□□□□□ -1.21
XRCC3-208ENST00000554811 TLX1NBP0CAT3 122 aa7.48□□□□□ -1.21
XRCC3-208ENST00000554811 C16orf90A8MZG2 172 aa7.48□□□□□ -1.21
XRCC3-208ENST00000554811 PCOTHQ58A44 107 aa7.48□□□□□ -1.21
XRCC3-208ENST00000554811 CASC2Q6XLA1 102 aa7.48□□□□□ -1.21
XRCC3-208ENST00000554811 RBM12B-AS1Q9P1G2 102 aa7.47□□□□□ -1.21
XRCC3-208ENST00000554811 KRTAP4-16G5E9R7 235 aaPredicted RBP7.47□□□□□ -1.21
XRCC3-208ENST00000554811 KRTAP11-1Q8IUC1 163 aa7.46□□□□□ -1.21
XRCC3-208ENST00000554811 LY6G6CO95867 125 aa7.46□□□□□ -1.22
XRCC3-208ENST00000554811 H0Y9P7 68 aa7.45□□□□□ -1.22
XRCC3-208ENST00000554811 SPRR1AP35321 89 aa7.45□□□□□ -1.22
XRCC3-208ENST00000554811 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
XRCC3-208ENST00000554811 C1orf64Q8NEQ6 169 aa7.45□□□□□ -1.22
XRCC3-208ENST00000554811 NDUFB1O75438 58 aa7.42□□□□□ -1.22
XRCC3-208ENST00000554811 PLA2G2DQ9UNK4 145 aa7.42□□□□□ -1.22
XRCC3-208ENST00000554811 IGHV6-1A0A0B4J1U7 121 aa7.42□□□□□ -1.22
XRCC3-208ENST00000554811 TNP2Q05952 138 aa7.42□□□□□ -1.22
XRCC3-208ENST00000554811 PANO1I0J062 215 aa7.42□□□□□ -1.22
XRCC3-208ENST00000554811 C14orf177Q52M58 125 aa7.41□□□□□ -1.22
XRCC3-208ENST00000554811 SPRR4Q96PI1 79 aa7.41□□□□□ -1.22
XRCC3-208ENST00000554811 IGLV5-37A0A075B6J1 123 aa7.4□□□□□ -1.23
XRCC3-208ENST00000554811 MOBPQ13875 183 aa7.38□□□□□ -1.23
XRCC3-208ENST00000554811 DNAH10Q8IVF4 4471 aa7.37□□□□□ -1.23
XRCC3-208ENST00000554811 RETNLBQ9BQ08 111 aa7.37□□□□□ -1.23
XRCC3-208ENST00000554811 NBDYA0A0U1RRE5 68 aa7.36□□□□□ -1.23
XRCC3-208ENST00000554811 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.36□□□□□ -1.23
XRCC3-208ENST00000554811 LYSTQ99698 3801 aa7.36□□□□□ -1.23
XRCC3-208ENST00000554811 A8MU10 97 aa7.36□□□□□ -1.23
XRCC3-208ENST00000554811 A8MUN3 132 aa7.35□□□□□ -1.23
XRCC3-208ENST00000554811 CHKB-CPT1BH3BT56 60 aa7.35□□□□□ -1.23
XRCC3-208ENST00000554811 PRR15Q8IV56 129 aa7.34□□□□□ -1.23
XRCC3-208ENST00000554811 CIRBP-AS1Q8TBR5 109 aa7.34□□□□□ -1.23
XRCC3-208ENST00000554811 APLNQ9ULZ1 77 aa7.34□□□□□ -1.23
XRCC3-208ENST00000554811 hDV103S1A0JD37 113 aa7.33□□□□□ -1.24
XRCC3-208ENST00000554811 C9orf163Q8N9P6 203 aa7.33□□□□□ -1.24
XRCC3-208ENST00000554811 CNBPP62633 177 aaKnown RBP7.32□□□□□ -1.24
XRCC3-208ENST00000554811 PRR15LQ9BU68 103 aa7.32□□□□□ -1.24
XRCC3-208ENST00000554811 A0A1B0GW54 56 aa7.31□□□□□ -1.24
XRCC3-208ENST00000554811 A8MWP4 228 aa7.31□□□□□ -1.24
XRCC3-208ENST00000554811 TRAV22A0A0B4J277 110 aa7.3□□□□□ -1.24
XRCC3-208ENST00000554811 IGLV5-52A0A0A0MRZ9 124 aa7.28□□□□□ -1.24
XRCC3-208ENST00000554811 FBN3Q75N90 2809 aa7.28□□□□□ -1.24
XRCC3-208ENST00000554811 A6NED7 52 aa7.27□□□□□ -1.25
XRCC3-208ENST00000554811 NUPR2A6NF83 97 aa7.26□□□□□ -1.25
XRCC3-208ENST00000554811 RTL8CO15255 209 aa7.26□□□□□ -1.25
XRCC3-208ENST00000554811 KTN1-AS1Q86SY8 53 aa7.26□□□□□ -1.25
XRCC3-208ENST00000554811 C8orf87E5RJ46 101 aa7.26□□□□□ -1.25
XRCC3-208ENST00000554811 PSORS1C2Q9UIG4 136 aa7.26□□□□□ -1.25
XRCC3-208ENST00000554811 SPAG11AQ6PDA7 123 aa7.25□□□□□ -1.25
XRCC3-208ENST00000554811 HUWE1Q7Z6Z7 4374 aaKnown RBP7.24□□□□□ -1.25
XRCC3-208ENST00000554811 LINC00472Q9H8W2 130 aa7.23□□□□□ -1.25
XRCC3-208ENST00000554811 A0A087WTM6 91 aa7.22□□□□□ -1.25
XRCC3-208ENST00000554811 PRR26Q8N8Z3 221 aa7.22□□□□□ -1.25
XRCC3-208ENST00000554811 ZCCHC13Q8WW36 166 aaKnown RBP7.22□□□□□ -1.25
XRCC3-208ENST00000554811 MMP24-AS1A0A0U1RRL7 71 aa7.21□□□□□ -1.26
XRCC3-208ENST00000554811 C1orf134Q5TEV5 83 aa7.2□□□□□ -1.26
XRCC3-208ENST00000554811 COA5Q86WW8 74 aa7.2□□□□□ -1.26
XRCC3-208ENST00000554811 C8orf17Q9NRJ1 99 aa7.2□□□□□ -1.26
XRCC3-208ENST00000554811 A0A087X002 238 aa7.19□□□□□ -1.26
XRCC3-208ENST00000554811 NOTCH2NLQ7Z3S9 236 aa7.19□□□□□ -1.26
XRCC3-208ENST00000554811 MEGF8Q7Z7M0 2845 aa7.19□□□□□ -1.26
XRCC3-208ENST00000554811 KRTAP29-1A8MX34 341 aaPredicted RBP7.19□□□□□ -1.26
XRCC3-208ENST00000554811 IGLV8-61A0A075B6I0 122 aa7.18□□□□□ -1.26
XRCC3-208ENST00000554811 ZNF706Q9Y5V0 76 aaPredicted RBP7.18□□□□□ -1.26
XRCC3-208ENST00000554811 SPACA4Q8TDM5 124 aa7.16□□□□□ -1.26
XRCC3-208ENST00000554811 PRAC1Q96KF2 57 aa7.16□□□□□ -1.26
XRCC3-208ENST00000554811 A0A1B0GVX0 72 aa7.14□□□□□ -1.27
XRCC3-208ENST00000554811 LCE6AA0A183 80 aa7.14□□□□□ -1.27
XRCC3-208ENST00000554811 DNAH9Q9NYC9 4486 aa7.14□□□□□ -1.27
XRCC3-208ENST00000554811 ZNF861PO60384 105 aa7.13□□□□□ -1.27
XRCC3-208ENST00000554811 SPRR1BP22528 89 aa7.13□□□□□ -1.27
XRCC3-208ENST00000554811 MRPL34Q9BQ48 92 aaKnown RBP7.13□□□□□ -1.27
XRCC3-208ENST00000554811 CYP4F30PQ9H0H9 118 aa7.13□□□□□ -1.27
XRCC3-208ENST00000554811 Q1T7F1 81 aa7.12□□□□□ -1.27
XRCC3-208ENST00000554811 Q6ZRN7 208 aaPredicted RBP7.11□□□□□ -1.27
XRCC3-208ENST00000554811 CMYA5Q8N3K9 4069 aa7.11□□□□□ -1.27
XRCC3-208ENST00000554811 WWC2-AS2Q96NR7 200 aa7.1□□□□□ -1.27
XRCC3-208ENST00000554811 Q8N9P0 234 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms