RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 GAGE2AQ6NT46 116 aa8.68□□□□□ -1.02
SHOX2-206ENST00000554685 ANKRD29Q8N6D5 301 aa8.68□□□□□ -1.02
SHOX2-206ENST00000554685 LINC00483Q53H64 154 aa8.67□□□□□ -1.02
SHOX2-206ENST00000554685 Q8N377 158 aa8.67□□□□□ -1.02
SHOX2-206ENST00000554685 LINC01600Q96MT4 127 aa8.67□□□□□ -1.02
SHOX2-206ENST00000554685 PRO0461Q9UI25 63 aa8.67□□□□□ -1.02
SHOX2-206ENST00000554685 MTURNQ8N3F0 131 aa8.66□□□□□ -1.02
SHOX2-206ENST00000554685 F8WEM9 126 aa8.65□□□□□ -1.02
SHOX2-206ENST00000554685 LAMTOR3Q9UHA4 124 aa8.65□□□□□ -1.02
SHOX2-206ENST00000554685 VPS13BQ7Z7G8 4022 aa8.64□□□□□ -1.03
SHOX2-206ENST00000554685 NDUFV3P56181 108 aaKnown RBP8.63□□□□□ -1.03
SHOX2-206ENST00000554685 FAM229BQ4G0N7 80 aa8.63□□□□□ -1.03
SHOX2-206ENST00000554685 HSPG2P98160 4391 aa8.62□□□□□ -1.03
SHOX2-206ENST00000554685 JMJD7-PLA2G4BH0Y9G9 81 aa8.62□□□□□ -1.03
SHOX2-206ENST00000554685 KIAA1109Q2LD37 5005 aa8.62□□□□□ -1.03
SHOX2-206ENST00000554685 SMIM29Q86T20 159 aa8.6□□□□□ -1.03
SHOX2-206ENST00000554685 CRYGAP11844 174 aa8.58□□□□□ -1.04
SHOX2-206ENST00000554685 TEN1Q86WV5 123 aa8.58□□□□□ -1.04
SHOX2-206ENST00000554685 C3orf22Q8N5N4 141 aa8.58□□□□□ -1.04
SHOX2-206ENST00000554685 KRTAP1-4P0C5Y4 121 aa8.57□□□□□ -1.04
SHOX2-206ENST00000554685 RBM3P98179 157 aaKnown RBP8.57□□□□□ -1.04
SHOX2-206ENST00000554685 FAT1Q14517 4588 aa8.56□□□□□ -1.04
SHOX2-206ENST00000554685 IGLV8-61A0A075B6I0 122 aa8.56□□□□□ -1.04
SHOX2-206ENST00000554685 C21orf62-AS1Q17RA5 79 aa8.56□□□□□ -1.04
SHOX2-206ENST00000554685 ETDBQ3ZM63 59 aa8.56□□□□□ -1.04
SHOX2-206ENST00000554685 C9orf153Q5TBE3 101 aa8.56□□□□□ -1.04
SHOX2-206ENST00000554685 Q8NBF4 154 aa8.56□□□□□ -1.04
SHOX2-206ENST00000554685 OBSCN-AS1Q96MR7 158 aa8.56□□□□□ -1.04
SHOX2-206ENST00000554685 ANAPC11Q9NYG5 84 aa8.56□□□□□ -1.04
SHOX2-206ENST00000554685 IGLV9-49A0A0B4J1Y8 123 aa8.55□□□□□ -1.04
SHOX2-206ENST00000554685 Q6JHZ5 121 aa8.55□□□□□ -1.04
SHOX2-206ENST00000554685 DSCR8Q96T75 97 aa8.55□□□□□ -1.04
SHOX2-206ENST00000554685 SRRM2Q9UQ35 2752 aaKnown RBP8.53□□□□□ -1.04
SHOX2-206ENST00000554685 PDE6GP18545 87 aa8.53□□□□□ -1.04
SHOX2-206ENST00000554685 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
SHOX2-206ENST00000554685 A0A1B0GV72 72 aa8.52□□□□□ -1.05
SHOX2-206ENST00000554685 MOBPQ13875 183 aa8.52□□□□□ -1.05
SHOX2-206ENST00000554685 KRTAP17-1Q9BYP8 105 aa8.52□□□□□ -1.05
SHOX2-206ENST00000554685 LOC110117498A0A087WWA1 95 aa8.5□□□□□ -1.05
SHOX2-206ENST00000554685 A0A087X002 238 aa8.5□□□□□ -1.05
SHOX2-206ENST00000554685 TRBV7-4A0A0J9YYF1 115 aa8.5□□□□□ -1.05
SHOX2-206ENST00000554685 C14orf132Q9NPU4 83 aa8.5□□□□□ -1.05
SHOX2-206ENST00000554685 TYMSOSQ8TAI1 123 aa8.49□□□□□ -1.05
SHOX2-206ENST00000554685 KRTAP13-2Q52LG2 175 aa8.48□□□□□ -1.05
SHOX2-206ENST00000554685 IGFL1Q6UW32 110 aa8.48□□□□□ -1.05
SHOX2-206ENST00000554685 PKHD1L1Q86WI1 4243 aa8.48□□□□□ -1.05
SHOX2-206ENST00000554685 Q6ZQT0 140 aa8.47□□□□□ -1.05
SHOX2-206ENST00000554685 PRR26Q8N8Z3 221 aa8.47□□□□□ -1.05
SHOX2-206ENST00000554685 CCKP06307 115 aa8.45□□□□□ -1.06
SHOX2-206ENST00000554685 HERC2O95714 4834 aa8.45□□□□□ -1.06
SHOX2-206ENST00000554685 J3QR89 54 aa8.44□□□□□ -1.06
SHOX2-206ENST00000554685 A0A1B0GW54 56 aa8.43□□□□□ -1.06
SHOX2-206ENST00000554685 OXTP01178 125 aa8.43□□□□□ -1.06
SHOX2-206ENST00000554685 CD164Q04900 197 aa8.43□□□□□ -1.06
SHOX2-206ENST00000554685 Q6Q795 121 aa8.43□□□□□ -1.06
SHOX2-206ENST00000554685 VPS25Q9BRG1 176 aa8.43□□□□□ -1.06
SHOX2-206ENST00000554685 KRTAP4-5Q9BYR2 181 aa8.42□□□□□ -1.06
SHOX2-206ENST00000554685 SPAG11AQ6PDA7 123 aa8.41□□□□□ -1.06
SHOX2-206ENST00000554685 A0A1W2PNM2 257 aa8.4□□□□□ -1.06
SHOX2-206ENST00000554685 LINC00304Q8N9R0 145 aa8.39□□□□□ -1.07
SHOX2-206ENST00000554685 A0A0G2JQZ4 141 aa8.38□□□□□ -1.07
SHOX2-206ENST00000554685 KRTAP10-8P60410 259 aa8.38□□□□□ -1.07
SHOX2-206ENST00000554685 TRBV7-7A0A0K0K1E9 115 aa8.37□□□□□ -1.07
SHOX2-206ENST00000554685 ACYP1P07311 99 aa8.37□□□□□ -1.07
SHOX2-206ENST00000554685 FAM240AA0A1B0GVK7 77 aa8.36□□□□□ -1.07
SHOX2-206ENST00000554685 K7ERU9 68 aa8.36□□□□□ -1.07
SHOX2-206ENST00000554685 SPINK1P00995 79 aa8.36□□□□□ -1.07
SHOX2-206ENST00000554685 HRCT1Q6UXD1 115 aa8.36□□□□□ -1.07
SHOX2-206ENST00000554685 SS18L2Q9UHA2 77 aa8.36□□□□□ -1.07
SHOX2-206ENST00000554685 KRTAP29-1A8MX34 341 aaPredicted RBP8.35□□□□□ -1.07
SHOX2-206ENST00000554685 RPS29P62273 56 aaKnown RBP8.35□□□□□ -1.07
SHOX2-206ENST00000554685 LIMD2Q9BT23 127 aa8.35□□□□□ -1.07
SHOX2-206ENST00000554685 A0A087WSZ3 146 aa8.33□□□□□ -1.08
SHOX2-206ENST00000554685 LOC100996750A0A140TA64 210 aa8.32□□□□□ -1.08
SHOX2-206ENST00000554685 KRTAP4-6Q9BYQ5 205 aa8.32□□□□□ -1.08
SHOX2-206ENST00000554685 XP32Q5T750 250 aa8.31□□□□□ -1.08
SHOX2-206ENST00000554685 Q5XG85 94 aa8.31□□□□□ -1.08
SHOX2-206ENST00000554685 MT1HL1P0DM35 61 aa8.3□□□□□ -1.08
SHOX2-206ENST00000554685 UBL5Q9BZL1 73 aa8.3□□□□□ -1.08
SHOX2-206ENST00000554685 FLG2Q5D862 2391 aaPredicted RBP8.28□□□□□ -1.08
SHOX2-206ENST00000554685 NREPQ16612 68 aa8.28□□□□□ -1.08
SHOX2-206ENST00000554685 ASB16-AS1Q495Z4 193 aa8.28□□□□□ -1.08
SHOX2-206ENST00000554685 LINC00846Q9NV44 126 aa8.28□□□□□ -1.08
SHOX2-206ENST00000554685 ABCA13Q86UQ4 5058 aa8.27□□□□□ -1.09
SHOX2-206ENST00000554685 FAT3Q8TDW7 4589 aa8.26□□□□□ -1.09
SHOX2-206ENST00000554685 H3BS24 57 aa8.26□□□□□ -1.09
SHOX2-206ENST00000554685 Q6ZVQ6 151 aa8.24□□□□□ -1.09
SHOX2-206ENST00000554685 LRP1Q07954 4544 aaKnown RBP8.23□□□□□ -1.09
SHOX2-206ENST00000554685 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
SHOX2-206ENST00000554685 J3KT08 172 aa8.21□□□□□ -1.1
SHOX2-206ENST00000554685 PCLOQ9Y6V0 5065 aa8.2□□□□□ -1.1
SHOX2-206ENST00000554685 LINC00643Q86TS7 51 aa8.19□□□□□ -1.1
SHOX2-206ENST00000554685 LINC00472Q9H8W2 130 aa8.19□□□□□ -1.1
SHOX2-206ENST00000554685 BPY2O14599 106 aa8.18□□□□□ -1.1
SHOX2-206ENST00000554685 ATP5EP2Q5VTU8 51 aa8.18□□□□□ -1.1
SHOX2-206ENST00000554685 SIGMAR1Q99720 223 aa8.18□□□□□ -1.1
SHOX2-206ENST00000554685 TNXBP22105 4242 aa8.18□□□□□ -1.1
SHOX2-206ENST00000554685 C1orf195Q5TG92 126 aa8.17□□□□□ -1.1
SHOX2-206ENST00000554685 IGKV4-1P06312 121 aa8.16□□□□□ -1.1
SHOX2-206ENST00000554685 Q96NJ1 140 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms