RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 VPREB1P12018 145 aa7.27□□□□□ -1.25
VPS33B-204ENST00000554660 USP17L23D6RBM5 183 aa7.26□□□□□ -1.25
VPS33B-204ENST00000554660 PANO1I0J062 215 aa7.26□□□□□ -1.25
VPS33B-204ENST00000554660 ZNF73O43830 326 aaPredicted RBP7.26□□□□□ -1.25
VPS33B-204ENST00000554660 COX7BP24311 80 aa7.26□□□□□ -1.25
VPS33B-204ENST00000554660 DSCR8Q96T75 97 aa7.26□□□□□ -1.25
VPS33B-204ENST00000554660 C1orf43Q9BWL3 253 aa7.26□□□□□ -1.25
VPS33B-204ENST00000554660 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.26□□□□□ -1.25
VPS33B-204ENST00000554660 IGKV3D-7A0A0C4DH55 119 aa7.25□□□□□ -1.25
VPS33B-204ENST00000554660 NDUFC2-KCTD14E9PQ53 114 aa7.25□□□□□ -1.25
VPS33B-204ENST00000554660 CXCL6P80162 114 aa7.25□□□□□ -1.25
VPS33B-204ENST00000554660 C14orf177Q52M58 125 aa7.25□□□□□ -1.25
VPS33B-204ENST00000554660 SMIM20Q8N5G0 67 aa7.25□□□□□ -1.25
VPS33B-204ENST00000554660 CAMK2N2Q96S95 79 aa7.25□□□□□ -1.25
VPS33B-204ENST00000554660 TRBV7-4A0A0J9YYF1 115 aa7.24□□□□□ -1.25
VPS33B-204ENST00000554660 Q6ZQY7 126 aa7.24□□□□□ -1.25
VPS33B-204ENST00000554660 TLX1NBP0CAT3 122 aa7.23□□□□□ -1.25
VPS33B-204ENST00000554660 TMEM258P61165 79 aa7.23□□□□□ -1.25
VPS33B-204ENST00000554660 RPS28P62857 69 aaKnown RBP7.23□□□□□ -1.25
VPS33B-204ENST00000554660 C15orf56Q8N910 161 aa7.23□□□□□ -1.25
VPS33B-204ENST00000554660 LAMTOR3Q9UHA4 124 aa7.23□□□□□ -1.25
VPS33B-204ENST00000554660 A0A1B0GW54 56 aa7.22□□□□□ -1.25
VPS33B-204ENST00000554660 Q6ZRU5 148 aa7.22□□□□□ -1.25
VPS33B-204ENST00000554660 C9orf163Q8N9P6 203 aa7.21□□□□□ -1.26
VPS33B-204ENST00000554660 IGLV5-37A0A075B6J1 123 aa7.19□□□□□ -1.26
VPS33B-204ENST00000554660 KCNQ1DNQ9H478 68 aa7.19□□□□□ -1.26
VPS33B-204ENST00000554660 J3KT08 172 aa7.18□□□□□ -1.26
VPS33B-204ENST00000554660 SYCNQ0VAF6 134 aa7.18□□□□□ -1.26
VPS33B-204ENST00000554660 Q6ZVQ6 151 aa7.18□□□□□ -1.26
VPS33B-204ENST00000554660 XAGE1AQ9HD64 81 aa7.18□□□□□ -1.26
VPS33B-204ENST00000554660 A0A087WVE0 104 aa7.17□□□□□ -1.26
VPS33B-204ENST00000554660 LOC107984640A0A0U1RRK4 108 aa7.17□□□□□ -1.26
VPS33B-204ENST00000554660 CHTF8P0CG12 524 aa7.17□□□□□ -1.26
VPS33B-204ENST00000554660 LINC01547P58512 204 aaPredicted RBP7.17□□□□□ -1.26
VPS33B-204ENST00000554660 TRAV7A0A075B6U4 112 aa7.16□□□□□ -1.26
VPS33B-204ENST00000554660 HIGD2BQ4VC39 106 aa7.16□□□□□ -1.26
VPS33B-204ENST00000554660 PRYO14603 147 aa7.14□□□□□ -1.27
VPS33B-204ENST00000554660 FAM19A1Q7Z5A9 133 aa7.14□□□□□ -1.27
VPS33B-204ENST00000554660 DHRS4-AS1Q9P1J3 65 aa7.14□□□□□ -1.27
VPS33B-204ENST00000554660 Q6ZRP5 223 aa7.13□□□□□ -1.27
VPS33B-204ENST00000554660 NKAPP1Q8N9T2 125 aa7.13□□□□□ -1.27
VPS33B-204ENST00000554660 SPACA4Q8TDM5 124 aa7.13□□□□□ -1.27
VPS33B-204ENST00000554660 IGLV5-48A0A075B6I7 105 aa7.12□□□□□ -1.27
VPS33B-204ENST00000554660 SPRR1AP35321 89 aa7.12□□□□□ -1.27
VPS33B-204ENST00000554660 CNBPP62633 177 aaKnown RBP7.12□□□□□ -1.27
VPS33B-204ENST00000554660 DPH3Q96FX2 82 aa7.12□□□□□ -1.27
VPS33B-204ENST00000554660 ERC2-IT1O76042 136 aa7.11□□□□□ -1.27
VPS33B-204ENST00000554660 KLKP1Q107X0 134 aa7.1□□□□□ -1.27
VPS33B-204ENST00000554660 KRTAP4-16G5E9R7 235 aaPredicted RBP7.09□□□□□ -1.27
VPS33B-204ENST00000554660 NDUFC1O43677 76 aa7.09□□□□□ -1.27
VPS33B-204ENST00000554660 Q6ZRX8 168 aa7.09□□□□□ -1.27
VPS33B-204ENST00000554660 C7orf33Q8WU49 177 aa7.09□□□□□ -1.27
VPS33B-204ENST00000554660 PLAC8Q9NZF1 115 aa7.09□□□□□ -1.27
VPS33B-204ENST00000554660 LPAP08519 4548 aa7.08□□□□□ -1.28
VPS33B-204ENST00000554660 IGLV1-50A0A075B6I6 118 aa7.07□□□□□ -1.28
VPS33B-204ENST00000554660 IGKV2-24A0A0C4DH68 120 aa7.06□□□□□ -1.28
VPS33B-204ENST00000554660 ATP5EP56381 51 aaPredicted RBP7.06□□□□□ -1.28
VPS33B-204ENST00000554660 Q8N377 158 aa7.05□□□□□ -1.28
VPS33B-204ENST00000554660 CYSTM1Q9H1C7 97 aa7.05□□□□□ -1.28
VPS33B-204ENST00000554660 ETDCA0A1B0GVM5 59 aa7.03□□□□□ -1.28
VPS33B-204ENST00000554660 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
VPS33B-204ENST00000554660 NREPQ16612 68 aa7.03□□□□□ -1.28
VPS33B-204ENST00000554660 C20orf197Q8N268 126 aa7.03□□□□□ -1.28
VPS33B-204ENST00000554660 FAM236DA0A1B0GTK5 79 aa7.02□□□□□ -1.29
VPS33B-204ENST00000554660 FAM236CP0DP71 79 aa7.02□□□□□ -1.29
VPS33B-204ENST00000554660 SPRR4Q96PI1 79 aa7.02□□□□□ -1.29
VPS33B-204ENST00000554660 PKIGQ9Y2B9 76 aa7.02□□□□□ -1.29
VPS33B-204ENST00000554660 A0A096LNI7 61 aa7.01□□□□□ -1.29
VPS33B-204ENST00000554660 H7BZZ5 65 aa7.01□□□□□ -1.29
VPS33B-204ENST00000554660 IGKV4-1P06312 121 aa7.01□□□□□ -1.29
VPS33B-204ENST00000554660 REG3GQ6UW15 175 aa7.01□□□□□ -1.29
VPS33B-204ENST00000554660 SPINK6Q6UWN8 80 aa7.01□□□□□ -1.29
VPS33B-204ENST00000554660 MRPL55Q7Z7F7 128 aaKnown RBP7.01□□□□□ -1.29
VPS33B-204ENST00000554660 Q8NBF4 154 aa7.01□□□□□ -1.29
VPS33B-204ENST00000554660 BPY2O14599 106 aa7□□□□□ -1.29
VPS33B-204ENST00000554660 SERP1Q9Y6X1 66 aa7□□□□□ -1.29
VPS33B-204ENST00000554660 MUC2Q02817 5179 aa7□□□□□ -1.29
VPS33B-204ENST00000554660 RPL37AP8A6NKH3 93 aa6.99□□□□□ -1.29
VPS33B-204ENST00000554660 FAM19A5Q7Z5A7 132 aaPredicted RBP6.99□□□□□ -1.29
VPS33B-204ENST00000554660 Q9BRP9 147 aa6.99□□□□□ -1.29
VPS33B-204ENST00000554660 IGLV8-61A0A075B6I0 122 aa6.97□□□□□ -1.29
VPS33B-204ENST00000554660 C1orf137Q5JT78 98 aa6.97□□□□□ -1.29
VPS33B-204ENST00000554660 A0A1W2PNM2 257 aa6.96□□□□□ -1.3
VPS33B-204ENST00000554660 KRTAP7-1Q8IUC3 87 aa6.96□□□□□ -1.3
VPS33B-204ENST00000554660 OCR1Q9BZK8 76 aa6.96□□□□□ -1.3
VPS33B-204ENST00000554660 H0Y9J4 135 aa6.94□□□□□ -1.3
VPS33B-204ENST00000554660 TMEM254Q8TBM7 123 aa6.94□□□□□ -1.3
VPS33B-204ENST00000554660 F8WEM9 126 aa6.93□□□□□ -1.3
VPS33B-204ENST00000554660 DEFB105AQ8NG35 78 aa6.93□□□□□ -1.3
VPS33B-204ENST00000554660 LINC00474Q9P2X8 69 aa6.93□□□□□ -1.3
VPS33B-204ENST00000554660 A0A0U1RQV1 116 aa6.92□□□□□ -1.3
VPS33B-204ENST00000554660 FAM168BA1KXE4 195 aa6.92□□□□□ -1.3
VPS33B-204ENST00000554660 UBE2BP63146 152 aa6.92□□□□□ -1.3
VPS33B-204ENST00000554660 C5orf47Q569G3 176 aa6.92□□□□□ -1.3
VPS33B-204ENST00000554660 SPRR1BP22528 89 aa6.91□□□□□ -1.3
VPS33B-204ENST00000554660 SMIM29Q86T20 159 aa6.91□□□□□ -1.3
VPS33B-204ENST00000554660 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
VPS33B-204ENST00000554660 FAT4Q6V0I7 4981 aa6.91□□□□□ -1.3
VPS33B-204ENST00000554660 SMIM26A0A096LP01 95 aa6.88□□□□□ -1.31
VPS33B-204ENST00000554660 PRR26Q8N8Z3 221 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms