RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 PHF5AQ7RTV0 110 aaKnown RBP7.35□□□□□ -1.23
PTPN21-205ENST00000554270 FAM229BQ4G0N7 80 aa7.35□□□□□ -1.23
PTPN21-205ENST00000554270 FP248Q71RG6 208 aaPredicted RBP7.34□□□□□ -1.24
PTPN21-205ENST00000554270 K7EIL1 84 aa7.33□□□□□ -1.24
PTPN21-205ENST00000554270 HCG22E2RYF7 251 aa7.32□□□□□ -1.24
PTPN21-205ENST00000554270 BCE1O60756 84 aa7.32□□□□□ -1.24
PTPN21-205ENST00000554270 OCR1Q9BZK8 76 aa7.32□□□□□ -1.24
PTPN21-205ENST00000554270 IGFL1Q6UW32 110 aa7.3□□□□□ -1.24
PTPN21-205ENST00000554270 CHKB-CPT1BH3BT56 60 aa7.3□□□□□ -1.24
PTPN21-205ENST00000554270 CD164Q04900 197 aa7.3□□□□□ -1.24
PTPN21-205ENST00000554270 EPM2AB3EWF7 344 aa7.29□□□□□ -1.24
PTPN21-205ENST00000554270 IGLV5-48A0A075B6I7 105 aa7.29□□□□□ -1.24
PTPN21-205ENST00000554270 ATP5EP56381 51 aaPredicted RBP7.29□□□□□ -1.24
PTPN21-205ENST00000554270 PCOTHQ58A44 107 aa7.29□□□□□ -1.24
PTPN21-205ENST00000554270 DSCR10P59022 87 aa7.28□□□□□ -1.24
PTPN21-205ENST00000554270 COL7A1Q02388 2944 aa7.28□□□□□ -1.24
PTPN21-205ENST00000554270 KRTAP1-5Q9BYS1 174 aa7.28□□□□□ -1.24
PTPN21-205ENST00000554270 SPINK6Q6UWN8 80 aa7.27□□□□□ -1.25
PTPN21-205ENST00000554270 CASC2Q6XLA1 102 aa7.27□□□□□ -1.25
PTPN21-205ENST00000554270 CDK2AP2O75956 126 aa7.27□□□□□ -1.25
PTPN21-205ENST00000554270 B9D2Q9BPU9 175 aa7.26□□□□□ -1.25
PTPN21-205ENST00000554270 KRTAP7-1Q8IUC3 87 aa7.26□□□□□ -1.25
PTPN21-205ENST00000554270 C1orf64Q8NEQ6 169 aa7.25□□□□□ -1.25
PTPN21-205ENST00000554270 NDUFB1O75438 58 aa7.25□□□□□ -1.25
PTPN21-205ENST00000554270 A6NED7 52 aa7.24□□□□□ -1.25
PTPN21-205ENST00000554270 H0Y9P7 68 aa7.24□□□□□ -1.25
PTPN21-205ENST00000554270 H3BS24 57 aa7.22□□□□□ -1.25
PTPN21-205ENST00000554270 ANAPC11Q9NYG5 84 aa7.22□□□□□ -1.25
PTPN21-205ENST00000554270 TLX1NBP0CAT3 122 aa7.21□□□□□ -1.25
PTPN21-205ENST00000554270 C16orf90A8MZG2 172 aa7.21□□□□□ -1.26
PTPN21-205ENST00000554270 IGHV6-1A0A0B4J1U7 121 aa7.21□□□□□ -1.26
PTPN21-205ENST00000554270 A8MUN3 132 aa7.2□□□□□ -1.26
PTPN21-205ENST00000554270 PRR15LQ9BU68 103 aa7.2□□□□□ -1.26
PTPN21-205ENST00000554270 ANK2Q01484 3957 aa7.19□□□□□ -1.26
PTPN21-205ENST00000554270 RBM12B-AS1Q9P1G2 102 aa7.18□□□□□ -1.26
PTPN21-205ENST00000554270 TGP01266 2768 aa7.18□□□□□ -1.26
PTPN21-205ENST00000554270 KRTAP4-16G5E9R7 235 aaPredicted RBP7.18□□□□□ -1.26
PTPN21-205ENST00000554270 SPRR1AP35321 89 aa7.17□□□□□ -1.26
PTPN21-205ENST00000554270 MDFIQ99750 246 aa7.17□□□□□ -1.26
PTPN21-205ENST00000554270 KRTAP11-1Q8IUC1 163 aa7.17□□□□□ -1.26
PTPN21-205ENST00000554270 C14orf177Q52M58 125 aa7.17□□□□□ -1.26
PTPN21-205ENST00000554270 SPRR4Q96PI1 79 aa7.17□□□□□ -1.26
PTPN21-205ENST00000554270 PLA2G2DQ9UNK4 145 aa7.16□□□□□ -1.26
PTPN21-205ENST00000554270 TNP2Q05952 138 aa7.16□□□□□ -1.26
PTPN21-205ENST00000554270 RETNLBQ9BQ08 111 aa7.15□□□□□ -1.26
PTPN21-205ENST00000554270 hDV103S1A0JD37 113 aa7.14□□□□□ -1.27
PTPN21-205ENST00000554270 PANO1I0J062 215 aa7.13□□□□□ -1.27
PTPN21-205ENST00000554270 MOBPQ13875 183 aa7.13□□□□□ -1.27
PTPN21-205ENST00000554270 IGLV5-37A0A075B6J1 123 aa7.12□□□□□ -1.27
PTPN21-205ENST00000554270 PRR15Q8IV56 129 aa7.12□□□□□ -1.27
PTPN21-205ENST00000554270 TRAV22A0A0B4J277 110 aa7.11□□□□□ -1.27
PTPN21-205ENST00000554270 A0A1B0GW54 56 aa7.11□□□□□ -1.27
PTPN21-205ENST00000554270 CIRBP-AS1Q8TBR5 109 aa7.11□□□□□ -1.27
PTPN21-205ENST00000554270 NBDYA0A0U1RRE5 68 aa7.1□□□□□ -1.27
PTPN21-205ENST00000554270 APLNQ9ULZ1 77 aa7.1□□□□□ -1.27
PTPN21-205ENST00000554270 A8MWP4 228 aa7.09□□□□□ -1.27
PTPN21-205ENST00000554270 SPAG11AQ6PDA7 123 aa7.08□□□□□ -1.28
PTPN21-205ENST00000554270 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.08□□□□□ -1.28
PTPN21-205ENST00000554270 CNBPP62633 177 aaKnown RBP7.07□□□□□ -1.28
PTPN21-205ENST00000554270 C9orf163Q8N9P6 203 aa7.07□□□□□ -1.28
PTPN21-205ENST00000554270 KTN1-AS1Q86SY8 53 aa7.07□□□□□ -1.28
PTPN21-205ENST00000554270 LY6G6CO95867 125 aa7.06□□□□□ -1.28
PTPN21-205ENST00000554270 A8MU10 97 aa7.05□□□□□ -1.28
PTPN21-205ENST00000554270 DNAH10Q8IVF4 4471 aa7.03□□□□□ -1.28
PTPN21-205ENST00000554270 NUPR2A6NF83 97 aa7.02□□□□□ -1.29
PTPN21-205ENST00000554270 COA5Q86WW8 74 aa7.02□□□□□ -1.29
PTPN21-205ENST00000554270 LYSTQ99698 3801 aa7.01□□□□□ -1.29
PTPN21-205ENST00000554270 RTL8CO15255 209 aa7□□□□□ -1.29
PTPN21-205ENST00000554270 IGLV5-52A0A0A0MRZ9 124 aa6.99□□□□□ -1.29
PTPN21-205ENST00000554270 ZCCHC13Q8WW36 166 aaKnown RBP6.99□□□□□ -1.29
PTPN21-205ENST00000554270 PSORS1C2Q9UIG4 136 aa6.99□□□□□ -1.29
PTPN21-205ENST00000554270 LINC00472Q9H8W2 130 aa6.99□□□□□ -1.29
PTPN21-205ENST00000554270 C8orf17Q9NRJ1 99 aa6.98□□□□□ -1.29
PTPN21-205ENST00000554270 A0A087WTM6 91 aa6.97□□□□□ -1.29
PTPN21-205ENST00000554270 MMP24-AS1A0A0U1RRL7 71 aa6.97□□□□□ -1.29
PTPN21-205ENST00000554270 FBN3Q75N90 2809 aa6.97□□□□□ -1.29
PTPN21-205ENST00000554270 HUWE1Q7Z6Z7 4374 aaKnown RBP6.96□□□□□ -1.3
PTPN21-205ENST00000554270 KRTAP29-1A8MX34 341 aaPredicted RBP6.95□□□□□ -1.3
PTPN21-205ENST00000554270 Q1T7F1 81 aa6.95□□□□□ -1.3
PTPN21-205ENST00000554270 ZNF706Q9Y5V0 76 aaPredicted RBP6.95□□□□□ -1.3
PTPN21-205ENST00000554270 LIMD2Q9BT23 127 aa6.95□□□□□ -1.3
PTPN21-205ENST00000554270 C8orf87E5RJ46 101 aa6.94□□□□□ -1.3
PTPN21-205ENST00000554270 CYP4F30PQ9H0H9 118 aa6.94□□□□□ -1.3
PTPN21-205ENST00000554270 A0A087X002 238 aa6.93□□□□□ -1.3
PTPN21-205ENST00000554270 NOTCH2NLQ7Z3S9 236 aa6.93□□□□□ -1.3
PTPN21-205ENST00000554270 IGLV8-61A0A075B6I0 122 aa6.93□□□□□ -1.3
PTPN21-205ENST00000554270 PRR26Q8N8Z3 221 aa6.92□□□□□ -1.3
PTPN21-205ENST00000554270 MRPL34Q9BQ48 92 aaKnown RBP6.92□□□□□ -1.3
PTPN21-205ENST00000554270 A0A1B0GVX0 72 aa6.92□□□□□ -1.3
PTPN21-205ENST00000554270 C1orf134Q5TEV5 83 aa6.92□□□□□ -1.3
PTPN21-205ENST00000554270 Q8N9P0 234 aaPredicted RBP6.92□□□□□ -1.3
PTPN21-205ENST00000554270 LCE6AA0A183 80 aa6.91□□□□□ -1.3
PTPN21-205ENST00000554270 Q5VV11 94 aa6.91□□□□□ -1.3
PTPN21-205ENST00000554270 DMBT1Q9UGM3 2413 aaPredicted RBP6.91□□□□□ -1.3
PTPN21-205ENST00000554270 H3BPC8 53 aa6.9□□□□□ -1.3
PTPN21-205ENST00000554270 SPACA4Q8TDM5 124 aa6.9□□□□□ -1.3
PTPN21-205ENST00000554270 PRAC1Q96KF2 57 aa6.9□□□□□ -1.31
PTPN21-205ENST00000554270 TP53AIP1Q9HCN2 124 aa6.89□□□□□ -1.31
PTPN21-205ENST00000554270 MEGF8Q7Z7M0 2845 aa6.88□□□□□ -1.31
PTPN21-205ENST00000554270 ZNF861PO60384 105 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms