RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 BIRC6Q9NR09 4857 aa4.62□□□□□ -1.67
TDP1-209ENST00000554180 NDUFV3P56181 108 aaKnown RBP4.62□□□□□ -1.67
TDP1-209ENST00000554180 ETDBQ3ZM63 59 aa4.62□□□□□ -1.67
TDP1-209ENST00000554180 GAGE2AQ6NT46 116 aa4.62□□□□□ -1.67
TDP1-209ENST00000554180 SPINK6Q6UWN8 80 aa4.62□□□□□ -1.67
TDP1-209ENST00000554180 DEFB105AQ8NG35 78 aa4.62□□□□□ -1.67
TDP1-209ENST00000554180 OBSCN-AS1Q96MR7 158 aa4.62□□□□□ -1.67
TDP1-209ENST00000554180 LAMTOR3Q9UHA4 124 aa4.62□□□□□ -1.67
TDP1-209ENST00000554180 F8WEM9 126 aa4.6□□□□□ -1.67
TDP1-209ENST00000554180 RBM3P98179 157 aaKnown RBP4.6□□□□□ -1.67
TDP1-209ENST00000554180 SMIM29Q86T20 159 aa4.6□□□□□ -1.67
TDP1-209ENST00000554180 HSPG2P98160 4391 aa4.59□□□□□ -1.67
TDP1-209ENST00000554180 IGLV8-61A0A075B6I0 122 aa4.59□□□□□ -1.67
TDP1-209ENST00000554180 PDE6GP18545 87 aa4.59□□□□□ -1.67
TDP1-209ENST00000554180 FAM229BQ4G0N7 80 aa4.59□□□□□ -1.67
TDP1-209ENST00000554180 Q5VSD8 79 aa4.59□□□□□ -1.67
TDP1-209ENST00000554180 KRTAP17-1Q9BYP8 105 aa4.59□□□□□ -1.67
TDP1-209ENST00000554180 EPPK1P58107 5090 aaKnown RBP4.58□□□□□ -1.68
TDP1-209ENST00000554180 LOC110117498A0A087WWA1 95 aa4.58□□□□□ -1.68
TDP1-209ENST00000554180 TRBV7-4A0A0J9YYF1 115 aa4.58□□□□□ -1.68
TDP1-209ENST00000554180 LCE2BO14633 110 aa4.58□□□□□ -1.68
TDP1-209ENST00000554180 Q6JHZ5 121 aa4.58□□□□□ -1.68
TDP1-209ENST00000554180 Q8N1X5 172 aa4.58□□□□□ -1.68
TDP1-209ENST00000554180 C3orf22Q8N5N4 141 aa4.58□□□□□ -1.68
TDP1-209ENST00000554180 DSCR8Q96T75 97 aa4.58□□□□□ -1.68
TDP1-209ENST00000554180 FAT1Q14517 4588 aa4.57□□□□□ -1.68
TDP1-209ENST00000554180 KRTAP1-4P0C5Y4 121 aa4.57□□□□□ -1.68
TDP1-209ENST00000554180 C14orf132Q9NPU4 83 aa4.57□□□□□ -1.68
TDP1-209ENST00000554180 RYR1P21817 5038 aa4.56□□□□□ -1.68
TDP1-209ENST00000554180 J3QR89 54 aa4.56□□□□□ -1.68
TDP1-209ENST00000554180 Q8NBF4 154 aa4.56□□□□□ -1.68
TDP1-209ENST00000554180 A0A1B0GV72 72 aa4.55□□□□□ -1.68
TDP1-209ENST00000554180 CRYGAP11844 174 aa4.55□□□□□ -1.68
TDP1-209ENST00000554180 Q6ZQT0 140 aa4.55□□□□□ -1.68
TDP1-209ENST00000554180 SVIPQ8NHG7 77 aa4.55□□□□□ -1.68
TDP1-209ENST00000554180 IGLV9-49A0A0B4J1Y8 123 aa4.54□□□□□ -1.68
TDP1-209ENST00000554180 A0A1B0GW54 56 aa4.54□□□□□ -1.68
TDP1-209ENST00000554180 K7ERU9 68 aa4.54□□□□□ -1.68
TDP1-209ENST00000554180 C9orf153Q5TBE3 101 aa4.54□□□□□ -1.68
TDP1-209ENST00000554180 ANAPC11Q9NYG5 84 aa4.54□□□□□ -1.68
TDP1-209ENST00000554180 A0A087X002 238 aa4.53□□□□□ -1.68
TDP1-209ENST00000554180 FAM240AA0A1B0GVK7 77 aa4.53□□□□□ -1.68
TDP1-209ENST00000554180 CCKP06307 115 aa4.53□□□□□ -1.68
TDP1-209ENST00000554180 MOBPQ13875 183 aa4.53□□□□□ -1.68
TDP1-209ENST00000554180 Q6Q795 121 aa4.53□□□□□ -1.68
TDP1-209ENST00000554180 IGFL1Q6UW32 110 aa4.53□□□□□ -1.68
TDP1-209ENST00000554180 SSBP3-AS1Q7Z2R9 100 aa4.53□□□□□ -1.68
TDP1-209ENST00000554180 KIAA1109Q2LD37 5005 aa4.52□□□□□ -1.69
TDP1-209ENST00000554180 ACYP1P07311 99 aa4.52□□□□□ -1.69
TDP1-209ENST00000554180 KRTAP13-2Q52LG2 175 aa4.51□□□□□ -1.69
TDP1-209ENST00000554180 A0A1W2PNM2 257 aa4.5□□□□□ -1.69
TDP1-209ENST00000554180 CD164Q04900 197 aa4.5□□□□□ -1.69
TDP1-209ENST00000554180 PKHD1L1Q86WI1 4243 aa4.49□□□□□ -1.69
TDP1-209ENST00000554180 TYMSOSQ8TAI1 123 aa4.49□□□□□ -1.69
TDP1-209ENST00000554180 VPS25Q9BRG1 176 aa4.49□□□□□ -1.69
TDP1-209ENST00000554180 FLG2Q5D862 2391 aaPredicted RBP4.48□□□□□ -1.69
TDP1-209ENST00000554180 TRBV7-7A0A0K0K1E9 115 aa4.48□□□□□ -1.69
TDP1-209ENST00000554180 PRR26Q8N8Z3 221 aa4.48□□□□□ -1.69
TDP1-209ENST00000554180 A0A0G2JQZ4 141 aa4.47□□□□□ -1.69
TDP1-209ENST00000554180 SS18L2Q9UHA2 77 aa4.47□□□□□ -1.69
TDP1-209ENST00000554180 RPS29P62273 56 aaKnown RBP4.46□□□□□ -1.7
TDP1-209ENST00000554180 SPAG11AQ6PDA7 123 aa4.46□□□□□ -1.7
TDP1-209ENST00000554180 UBL5Q9BZL1 73 aa4.46□□□□□ -1.7
TDP1-209ENST00000554180 LINC00846Q9NV44 126 aa4.46□□□□□ -1.7
TDP1-209ENST00000554180 A0A087WSZ3 146 aa4.45□□□□□ -1.7
TDP1-209ENST00000554180 SPINK1P00995 79 aa4.45□□□□□ -1.7
TDP1-209ENST00000554180 Q5XG85 94 aa4.45□□□□□ -1.7
TDP1-209ENST00000554180 LINC00304Q8N9R0 145 aa4.45□□□□□ -1.7
TDP1-209ENST00000554180 OXTP01178 125 aa4.44□□□□□ -1.7
TDP1-209ENST00000554180 KRTAP10-8P60410 259 aa4.44□□□□□ -1.7
TDP1-209ENST00000554180 LIMD2Q9BT23 127 aa4.44□□□□□ -1.7
TDP1-209ENST00000554180 HERC2O95714 4834 aa4.43□□□□□ -1.7
TDP1-209ENST00000554180 NREPQ16612 68 aa4.43□□□□□ -1.7
TDP1-209ENST00000554180 ASB16-AS1Q495Z4 193 aa4.43□□□□□ -1.7
TDP1-209ENST00000554180 Q6ZVQ6 151 aa4.43□□□□□ -1.7
TDP1-209ENST00000554180 KRTAP4-5Q9BYR2 181 aa4.43□□□□□ -1.7
TDP1-209ENST00000554180 CDIP1Q9H305 208 aa4.43□□□□□ -1.7
TDP1-209ENST00000554180 ATP5EP2Q5VTU8 51 aa4.42□□□□□ -1.7
TDP1-209ENST00000554180 HRCT1Q6UXD1 115 aa4.42□□□□□ -1.7
TDP1-209ENST00000554180 LINC00643Q86TS7 51 aa4.42□□□□□ -1.7
TDP1-209ENST00000554180 MYCBP2O75592 4640 aa4.42□□□□□ -1.7
TDP1-209ENST00000554180 KRTAP29-1A8MX34 341 aaPredicted RBP4.4□□□□□ -1.71
TDP1-209ENST00000554180 MT1HL1P0DM35 61 aa4.4□□□□□ -1.71
TDP1-209ENST00000554180 LINC00472Q9H8W2 130 aa4.4□□□□□ -1.71
TDP1-209ENST00000554180 LRP1Q07954 4544 aaKnown RBP4.4□□□□□ -1.71
TDP1-209ENST00000554180 DMBT1Q9UGM3 2413 aaPredicted RBP4.39□□□□□ -1.71
TDP1-209ENST00000554180 J3KT08 172 aa4.39□□□□□ -1.71
TDP1-209ENST00000554180 CXCL6P80162 114 aa4.39□□□□□ -1.71
TDP1-209ENST00000554180 TNXBP22105 4242 aa4.38□□□□□ -1.71
TDP1-209ENST00000554180 LOC100996750A0A140TA64 210 aa4.38□□□□□ -1.71
TDP1-209ENST00000554180 BPY2O14599 106 aa4.38□□□□□ -1.71
TDP1-209ENST00000554180 Q96NJ1 140 aa4.38□□□□□ -1.71
TDP1-209ENST00000554180 SIGMAR1Q99720 223 aa4.38□□□□□ -1.71
TDP1-209ENST00000554180 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
TDP1-209ENST00000554180 FAT3Q8TDW7 4589 aa4.38□□□□□ -1.71
TDP1-209ENST00000554180 PCLOQ9Y6V0 5065 aa4.37□□□□□ -1.71
TDP1-209ENST00000554180 C1orf195Q5TG92 126 aa4.36□□□□□ -1.71
TDP1-209ENST00000554180 A8MWP4 228 aa4.35□□□□□ -1.71
TDP1-209ENST00000554180 IGKV4-1P06312 121 aa4.35□□□□□ -1.71
TDP1-209ENST00000554180 IMUPQ9GZP8 106 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms