RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 SERP1Q9Y6X1 66 aa8.01□□□□□ -1.13
VIPAS39-206ENST00000553888 EPM2AB3EWF7 344 aa8.01□□□□□ -1.13
VIPAS39-206ENST00000553888 PRLHP81277 87 aa8.01□□□□□ -1.13
VIPAS39-206ENST00000553888 RTL8CO15255 209 aa8□□□□□ -1.13
VIPAS39-206ENST00000553888 TNP2Q05952 138 aa8□□□□□ -1.13
VIPAS39-206ENST00000553888 UBE2BP63146 152 aa7.99□□□□□ -1.13
VIPAS39-206ENST00000553888 IMUPQ9GZP8 106 aa7.99□□□□□ -1.13
VIPAS39-206ENST00000553888 FAT2Q9NYQ8 4349 aa7.99□□□□□ -1.13
VIPAS39-206ENST00000553888 JMJD7-PLA2G4BH0Y9G9 81 aa7.99□□□□□ -1.13
VIPAS39-206ENST00000553888 SACSQ9NZJ4 4579 aa7.98□□□□□ -1.13
VIPAS39-206ENST00000553888 LINC01547P58512 204 aaPredicted RBP7.98□□□□□ -1.13
VIPAS39-206ENST00000553888 Q8N377 158 aa7.98□□□□□ -1.13
VIPAS39-206ENST00000553888 LINC00846Q9NV44 126 aa7.98□□□□□ -1.13
VIPAS39-206ENST00000553888 CCKP06307 115 aa7.97□□□□□ -1.13
VIPAS39-206ENST00000553888 ATOX1O00244 68 aa7.96□□□□□ -1.13
VIPAS39-206ENST00000553888 SPACA4Q8TDM5 124 aa7.96□□□□□ -1.13
VIPAS39-206ENST00000553888 PKD1P98161 4303 aa7.96□□□□□ -1.14
VIPAS39-206ENST00000553888 DHRS4-AS1Q9P1J3 65 aa7.96□□□□□ -1.14
VIPAS39-206ENST00000553888 ACYP1P07311 99 aa7.95□□□□□ -1.14
VIPAS39-206ENST00000553888 Q6ZQT0 140 aa7.95□□□□□ -1.14
VIPAS39-206ENST00000553888 IGLV5-52A0A0A0MRZ9 124 aa7.95□□□□□ -1.14
VIPAS39-206ENST00000553888 MPLKIPQ8TAP9 179 aa7.95□□□□□ -1.14
VIPAS39-206ENST00000553888 HIGD2AQ9BW72 106 aa7.94□□□□□ -1.14
VIPAS39-206ENST00000553888 KRTAP10-2P60368 255 aa7.93□□□□□ -1.14
VIPAS39-206ENST00000553888 KTN1-AS1Q86SY8 53 aa7.92□□□□□ -1.14
VIPAS39-206ENST00000553888 C3orf84H3BNL1 204 aa7.92□□□□□ -1.14
VIPAS39-206ENST00000553888 SERP2Q8N6R1 65 aa7.92□□□□□ -1.14
VIPAS39-206ENST00000553888 LOC110117498A0A087WWA1 95 aa7.91□□□□□ -1.14
VIPAS39-206ENST00000553888 TRBV7-4A0A0J9YYF1 115 aa7.9□□□□□ -1.14
VIPAS39-206ENST00000553888 IGKV3D-7A0A0C4DH55 119 aa7.89□□□□□ -1.15
VIPAS39-206ENST00000553888 H3BQ85 93 aa7.89□□□□□ -1.15
VIPAS39-206ENST00000553888 A0A0G2JQZ4 141 aa7.89□□□□□ -1.15
VIPAS39-206ENST00000553888 IGLV5-48A0A075B6I7 105 aa7.89□□□□□ -1.15
VIPAS39-206ENST00000553888 HAMPP81172 84 aa7.89□□□□□ -1.15
VIPAS39-206ENST00000553888 LINC00643Q86TS7 51 aa7.89□□□□□ -1.15
VIPAS39-206ENST00000553888 GHRHP01286 108 aa7.87□□□□□ -1.15
VIPAS39-206ENST00000553888 UBE2AP49459 152 aa7.87□□□□□ -1.15
VIPAS39-206ENST00000553888 FAM30AQ9NZY2 134 aa7.87□□□□□ -1.15
VIPAS39-206ENST00000553888 SMIM29Q86T20 159 aa7.86□□□□□ -1.15
VIPAS39-206ENST00000553888 PKHD1P08F94 4074 aa7.86□□□□□ -1.15
VIPAS39-206ENST00000553888 HIST1H4AP62805 103 aaKnown RBP7.85□□□□□ -1.15
VIPAS39-206ENST00000553888 A8MUN3 132 aa7.84□□□□□ -1.15
VIPAS39-206ENST00000553888 BCE1O60756 84 aa7.84□□□□□ -1.15
VIPAS39-206ENST00000553888 PLAC8Q9NZF1 115 aa7.84□□□□□ -1.15
VIPAS39-206ENST00000553888 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
VIPAS39-206ENST00000553888 KRTAP13-1Q8IUC0 172 aa7.82□□□□□ -1.16
VIPAS39-206ENST00000553888 LRP1BQ9NZR2 4599 aa7.82□□□□□ -1.16
VIPAS39-206ENST00000553888 KMT2CQ8NEZ4 4911 aaKnown RBP7.81□□□□□ -1.16
VIPAS39-206ENST00000553888 A0A087WVE0 104 aa7.81□□□□□ -1.16
VIPAS39-206ENST00000553888 PDE6GP18545 87 aa7.81□□□□□ -1.16
VIPAS39-206ENST00000553888 KRTAP10-1P60331 282 aa7.81□□□□□ -1.16
VIPAS39-206ENST00000553888 C1orf137Q5JT78 98 aa7.81□□□□□ -1.16
VIPAS39-206ENST00000553888 Q6ZVQ6 151 aa7.81□□□□□ -1.16
VIPAS39-206ENST00000553888 A0A1W2PNM2 257 aa7.81□□□□□ -1.16
VIPAS39-206ENST00000553888 Q6JHZ5 121 aa7.81□□□□□ -1.16
VIPAS39-206ENST00000553888 UBL5Q9BZL1 73 aa7.8□□□□□ -1.16
VIPAS39-206ENST00000553888 H0Y9J4 135 aa7.8□□□□□ -1.16
VIPAS39-206ENST00000553888 SCXQ7RTU7 201 aa7.8□□□□□ -1.16
VIPAS39-206ENST00000553888 C20orf197Q8N268 126 aa7.79□□□□□ -1.16
VIPAS39-206ENST00000553888 CIRBP-AS1Q8TBR5 109 aa7.79□□□□□ -1.16
VIPAS39-206ENST00000553888 FAM229BQ4G0N7 80 aa7.78□□□□□ -1.16
VIPAS39-206ENST00000553888 RYR2Q92736 4967 aa7.78□□□□□ -1.16
VIPAS39-206ENST00000553888 IGFL1Q6UW32 110 aa7.77□□□□□ -1.17
VIPAS39-206ENST00000553888 H7BZZ5 65 aa7.76□□□□□ -1.17
VIPAS39-206ENST00000553888 F8WEM9 126 aa7.76□□□□□ -1.17
VIPAS39-206ENST00000553888 ANAPC11Q9NYG5 84 aa7.76□□□□□ -1.17
VIPAS39-206ENST00000553888 Q8NBF4 154 aa7.74□□□□□ -1.17
VIPAS39-206ENST00000553888 LCE6AA0A183 80 aa7.74□□□□□ -1.17
VIPAS39-206ENST00000553888 VPS13BQ7Z7G8 4022 aa7.73□□□□□ -1.17
VIPAS39-206ENST00000553888 A8MU10 97 aa7.72□□□□□ -1.17
VIPAS39-206ENST00000553888 SPRR1BP22528 89 aa7.72□□□□□ -1.17
VIPAS39-206ENST00000553888 Q8N9L7 120 aa7.72□□□□□ -1.17
VIPAS39-206ENST00000553888 DYNC1H1Q14204 4646 aaKnown RBP7.72□□□□□ -1.17
VIPAS39-206ENST00000553888 Q6ZSA8 131 aa7.72□□□□□ -1.17
VIPAS39-206ENST00000553888 SPRR4Q96PI1 79 aa7.72□□□□□ -1.17
VIPAS39-206ENST00000553888 IGLV9-49A0A0B4J1Y8 123 aa7.71□□□□□ -1.18
VIPAS39-206ENST00000553888 LINC00313P59037 77 aa7.71□□□□□ -1.18
VIPAS39-206ENST00000553888 NDUFS5O43920 106 aa7.7□□□□□ -1.18
VIPAS39-206ENST00000553888 ZNF861PO60384 105 aa7.7□□□□□ -1.18
VIPAS39-206ENST00000553888 NREPQ16612 68 aa7.7□□□□□ -1.18
VIPAS39-206ENST00000553888 IGLV8-61A0A075B6I0 122 aa7.69□□□□□ -1.18
VIPAS39-206ENST00000553888 ATP5EP2Q5VTU8 51 aa7.69□□□□□ -1.18
VIPAS39-206ENST00000553888 IGLV7-43P04211 117 aa7.69□□□□□ -1.18
VIPAS39-206ENST00000553888 ZNF706Q9Y5V0 76 aaPredicted RBP7.69□□□□□ -1.18
VIPAS39-206ENST00000553888 DEFB116Q30KQ4 102 aa7.67□□□□□ -1.18
VIPAS39-206ENST00000553888 LCA10Q71F78 164 aa7.67□□□□□ -1.18
VIPAS39-206ENST00000553888 A0A087WSZ3 146 aa7.67□□□□□ -1.18
VIPAS39-206ENST00000553888 BPY2O14599 106 aa7.66□□□□□ -1.18
VIPAS39-206ENST00000553888 CXCL6P80162 114 aa7.65□□□□□ -1.18
VIPAS39-206ENST00000553888 LINC00483Q53H64 154 aa7.65□□□□□ -1.19
VIPAS39-206ENST00000553888 SPTSSBQ8NFR3 76 aa7.64□□□□□ -1.19
VIPAS39-206ENST00000553888 MOBPQ13875 183 aa7.63□□□□□ -1.19
VIPAS39-206ENST00000553888 RYR3Q15413 4870 aa7.63□□□□□ -1.19
VIPAS39-206ENST00000553888 SNURFQ9Y675 71 aa7.63□□□□□ -1.19
VIPAS39-206ENST00000553888 APOBP04114 4563 aaKnown RBP7.62□□□□□ -1.19
VIPAS39-206ENST00000553888 PSPHP1O15172 72 aa7.62□□□□□ -1.19
VIPAS39-206ENST00000553888 IGKV4-1P06312 121 aa7.62□□□□□ -1.19
VIPAS39-206ENST00000553888 A0A1B0GVY2 172 aa7.61□□□□□ -1.19
VIPAS39-206ENST00000553888 MP68P56378 58 aa7.61□□□□□ -1.19
VIPAS39-206ENST00000553888 FAT1Q14517 4588 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms