RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 LITAFQ99732 161 aa4.45□□□□□ -1.7
PRKCH-208ENST00000553846 CBY1Q9Y3M2 126 aa4.45□□□□□ -1.7
PRKCH-208ENST00000553846 C9orf118A6NHY6 69 aa4.44□□□□□ -1.7
PRKCH-208ENST00000553846 KRTAP16-1A8MUX0 517 aa4.44□□□□□ -1.7
PRKCH-208ENST00000553846 E9PLD3 99 aa4.44□□□□□ -1.7
PRKCH-208ENST00000553846 COX7BP24311 80 aa4.44□□□□□ -1.7
PRKCH-208ENST00000553846 TAL2Q16559 108 aa4.44□□□□□ -1.7
PRKCH-208ENST00000553846 C6orf99Q4VX62 202 aa4.44□□□□□ -1.7
PRKCH-208ENST00000553846 SPANXCQ9NY87 97 aa4.44□□□□□ -1.7
PRKCH-208ENST00000553846 SPANXDQ9BXN6 97 aa4.43□□□□□ -1.7
PRKCH-208ENST00000553846 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
PRKCH-208ENST00000553846 TRBV20-1A0A075B6N2 111 aa4.42□□□□□ -1.7
PRKCH-208ENST00000553846 TRBV7-6A0A0J9YX20 115 aa4.42□□□□□ -1.7
PRKCH-208ENST00000553846 ZNF815PA8K554 130 aa4.42□□□□□ -1.7
PRKCH-208ENST00000553846 HRES1P13985 223 aa4.42□□□□□ -1.7
PRKCH-208ENST00000553846 PCP2Q8IVA1 136 aa4.42□□□□□ -1.7
PRKCH-208ENST00000553846 IGFL1Q6UW32 110 aa4.41□□□□□ -1.7
PRKCH-208ENST00000553846 TTTY13Q9BZ97 58 aa4.41□□□□□ -1.7
PRKCH-208ENST00000553846 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.71
PRKCH-208ENST00000553846 TRBV7-7A0A0K0K1E9 115 aa4.4□□□□□ -1.71
PRKCH-208ENST00000553846 SYS1-DBNDD2H3BUS1 97 aa4.4□□□□□ -1.71
PRKCH-208ENST00000553846 TIMM17BO60830 172 aa4.4□□□□□ -1.71
PRKCH-208ENST00000553846 Q96NJ1 140 aa4.4□□□□□ -1.71
PRKCH-208ENST00000553846 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
PRKCH-208ENST00000553846 KMT2DO14686 5537 aa4.39□□□□□ -1.71
PRKCH-208ENST00000553846 A6NDN8 102 aa4.38□□□□□ -1.71
PRKCH-208ENST00000553846 COLCA2A8K830 154 aa4.38□□□□□ -1.71
PRKCH-208ENST00000553846 SCGB1D4Q6XE38 83 aa4.38□□□□□ -1.71
PRKCH-208ENST00000553846 LINC00518Q8N0U6 118 aa4.38□□□□□ -1.71
PRKCH-208ENST00000553846 A0A1B0GWB2 263 aa4.37□□□□□ -1.71
PRKCH-208ENST00000553846 LINC01545Q5VT33 79 aa4.37□□□□□ -1.71
PRKCH-208ENST00000553846 PET117Q6UWS5 81 aa4.36□□□□□ -1.71
PRKCH-208ENST00000553846 NOTCH2NLQ7Z3S9 236 aa4.36□□□□□ -1.71
PRKCH-208ENST00000553846 SLC7A5P1Q8MH63 180 aa4.36□□□□□ -1.71
PRKCH-208ENST00000553846 CLEC2BQ92478 149 aa4.36□□□□□ -1.71
PRKCH-208ENST00000553846 FAM236DA0A1B0GTK5 79 aa4.35□□□□□ -1.71
PRKCH-208ENST00000553846 HIST1H2BKO60814 126 aa4.35□□□□□ -1.71
PRKCH-208ENST00000553846 HIST1H2BJP06899 126 aa4.35□□□□□ -1.71
PRKCH-208ENST00000553846 FAM236CP0DP71 79 aa4.35□□□□□ -1.71
PRKCH-208ENST00000553846 HIST1H2BOP23527 126 aa4.35□□□□□ -1.71
PRKCH-208ENST00000553846 HIST1H2BBP33778 126 aa4.35□□□□□ -1.71
PRKCH-208ENST00000553846 HIST1H2BDP58876 126 aa4.35□□□□□ -1.71
PRKCH-208ENST00000553846 KRTDAPP60985 99 aa4.35□□□□□ -1.71
PRKCH-208ENST00000553846 HIST1H2BCP62807 126 aa4.35□□□□□ -1.71
PRKCH-208ENST00000553846 HIST2H2BEQ16778 126 aa4.35□□□□□ -1.71
PRKCH-208ENST00000553846 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.35□□□□□ -1.71
PRKCH-208ENST00000553846 HIST1H2BHQ93079 126 aa4.35□□□□□ -1.71
PRKCH-208ENST00000553846 HIST1H2BNQ99877 126 aa4.35□□□□□ -1.71
PRKCH-208ENST00000553846 HIST1H2BMQ99879 126 aa4.35□□□□□ -1.71
PRKCH-208ENST00000553846 F8WEM9 126 aa4.34□□□□□ -1.71
PRKCH-208ENST00000553846 C3orf79P0CE67 100 aa4.34□□□□□ -1.71
PRKCH-208ENST00000553846 KRTAP5-9P26371 169 aa4.34□□□□□ -1.71
PRKCH-208ENST00000553846 COPS9Q8WXC6 57 aa4.34□□□□□ -1.71
PRKCH-208ENST00000553846 Q6JHZ5 121 aa4.33□□□□□ -1.72
PRKCH-208ENST00000553846 MUSTN1Q8IVN3 82 aa4.33□□□□□ -1.72
PRKCH-208ENST00000553846 ATOH7Q8N100 152 aa4.33□□□□□ -1.72
PRKCH-208ENST00000553846 IFITM1P13164 125 aa4.32□□□□□ -1.72
PRKCH-208ENST00000553846 SMIM11BQ8TCY0 68 aa4.32□□□□□ -1.72
PRKCH-208ENST00000553846 NHP2Q9NX24 153 aaKnown RBP4.32□□□□□ -1.72
PRKCH-208ENST00000553846 A4D1N5 150 aa4.31□□□□□ -1.72
PRKCH-208ENST00000553846 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
PRKCH-208ENST00000553846 Q8N9P0 234 aaPredicted RBP4.31□□□□□ -1.72
PRKCH-208ENST00000553846 RBM12B-AS1Q9P1G2 102 aa4.31□□□□□ -1.72
PRKCH-208ENST00000553846 TRAV13-2A0A0B4J235 113 aa4.3□□□□□ -1.72
PRKCH-208ENST00000553846 LST1O00453 97 aa4.3□□□□□ -1.72
PRKCH-208ENST00000553846 Q6ZVH6 145 aa4.29□□□□□ -1.72
PRKCH-208ENST00000553846 VAMP3Q15836 100 aa4.28□□□□□ -1.72
PRKCH-208ENST00000553846 OCIAD2Q56VL3 154 aa4.28□□□□□ -1.72
PRKCH-208ENST00000553846 Q6ZQY7 126 aa4.28□□□□□ -1.72
PRKCH-208ENST00000553846 A8MWP4 228 aa4.27□□□□□ -1.73
PRKCH-208ENST00000553846 DSCR10P59022 87 aa4.27□□□□□ -1.73
PRKCH-208ENST00000553846 LINC00575Q6W349 94 aa4.26□□□□□ -1.73
PRKCH-208ENST00000553846 hADV29S1A0JD25 119 aa4.25□□□□□ -1.73
PRKCH-208ENST00000553846 COA6Q5JTJ3 125 aaKnown RBP4.25□□□□□ -1.73
PRKCH-208ENST00000553846 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
PRKCH-208ENST00000553846 H3BUT2 72 aa4.24□□□□□ -1.73
PRKCH-208ENST00000553846 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
PRKCH-208ENST00000553846 C12orf57Q99622 126 aa4.24□□□□□ -1.73
PRKCH-208ENST00000553846 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
PRKCH-208ENST00000553846 SNHG12Q9BXW3 62 aa4.23□□□□□ -1.73
PRKCH-208ENST00000553846 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
PRKCH-208ENST00000553846 SS18L2Q9UHA2 77 aa4.23□□□□□ -1.73
PRKCH-208ENST00000553846 HSBP1L1C9JCN9 74 aa4.21□□□□□ -1.74
PRKCH-208ENST00000553846 MT1BP07438 61 aa4.21□□□□□ -1.74
PRKCH-208ENST00000553846 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.21□□□□□ -1.74
PRKCH-208ENST00000553846 A6NN06 94 aa4.2□□□□□ -1.74
PRKCH-208ENST00000553846 SNRPEP62304 92 aaKnown RBP4.2□□□□□ -1.74
PRKCH-208ENST00000553846 PPDPFLQ8WWR9 84 aa4.2□□□□□ -1.74
PRKCH-208ENST00000553846 A0A087WSZ3 146 aa4.19□□□□□ -1.74
PRKCH-208ENST00000553846 BVES-AS1Q5T3Y7 98 aa4.19□□□□□ -1.74
PRKCH-208ENST00000553846 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
PRKCH-208ENST00000553846 SCGB1D1O95968 90 aa4.18□□□□□ -1.74
PRKCH-208ENST00000553846 S100A2P29034 98 aa4.18□□□□□ -1.74
PRKCH-208ENST00000553846 LINC00313P59037 77 aa4.18□□□□□ -1.74
PRKCH-208ENST00000553846 TEN1Q86WV5 123 aa4.18□□□□□ -1.74
PRKCH-208ENST00000553846 MTURNQ8N3F0 131 aa4.18□□□□□ -1.74
PRKCH-208ENST00000553846 HIST1H4GQ99525 98 aa4.18□□□□□ -1.74
PRKCH-208ENST00000553846 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
PRKCH-208ENST00000553846 SIGMAR1Q99720 223 aa4.17□□□□□ -1.74
PRKCH-208ENST00000553846 HIST1H2BLQ99880 126 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms