RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 TMEM256-PLSCR3K7ERE1 68 aa8.41□□□□□ -1.06
PRKCH-206ENST00000553830 GHRHP01286 108 aa8.41□□□□□ -1.06
PRKCH-206ENST00000553830 SPRR1BP22528 89 aa8.41□□□□□ -1.06
PRKCH-206ENST00000553830 F8WEM9 126 aa8.4□□□□□ -1.06
PRKCH-206ENST00000553830 NDUFV3P56181 108 aaKnown RBP8.4□□□□□ -1.06
PRKCH-206ENST00000553830 SMIM29Q86T20 159 aa8.4□□□□□ -1.06
PRKCH-206ENST00000553830 FLG2Q5D862 2391 aaPredicted RBP8.4□□□□□ -1.07
PRKCH-206ENST00000553830 A0A087X002 238 aa8.39□□□□□ -1.07
PRKCH-206ENST00000553830 UBE2V1Q13404 147 aa8.39□□□□□ -1.07
PRKCH-206ENST00000553830 ANKRD29Q8N6D5 301 aa8.39□□□□□ -1.07
PRKCH-206ENST00000553830 PRR26Q8N8Z3 221 aa8.39□□□□□ -1.07
PRKCH-206ENST00000553830 PPDPFLQ8WWR9 84 aa8.39□□□□□ -1.07
PRKCH-206ENST00000553830 H3BQ85 93 aa8.38□□□□□ -1.07
PRKCH-206ENST00000553830 H3BT86 120 aa8.38□□□□□ -1.07
PRKCH-206ENST00000553830 CRYGAP11844 174 aa8.38□□□□□ -1.07
PRKCH-206ENST00000553830 SMCPP49901 116 aaPredicted RBP8.38□□□□□ -1.07
PRKCH-206ENST00000553830 MOBPQ13875 183 aa8.38□□□□□ -1.07
PRKCH-206ENST00000553830 PRO0461Q9UI25 63 aa8.38□□□□□ -1.07
PRKCH-206ENST00000553830 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
PRKCH-206ENST00000553830 FAM229BQ4G0N7 80 aa8.37□□□□□ -1.07
PRKCH-206ENST00000553830 KRTAP13-2Q52LG2 175 aa8.35□□□□□ -1.07
PRKCH-206ENST00000553830 A0A0G2JQZ4 141 aa8.34□□□□□ -1.07
PRKCH-206ENST00000553830 F8W1H4 67 aa8.33□□□□□ -1.08
PRKCH-206ENST00000553830 Q8NBF4 154 aa8.33□□□□□ -1.08
PRKCH-206ENST00000553830 TYMSOSQ8TAI1 123 aa8.33□□□□□ -1.08
PRKCH-206ENST00000553830 RBM3P98179 157 aaKnown RBP8.3□□□□□ -1.08
PRKCH-206ENST00000553830 HRCT1Q6UXD1 115 aa8.3□□□□□ -1.08
PRKCH-206ENST00000553830 LINC01600Q96MT4 127 aa8.3□□□□□ -1.08
PRKCH-206ENST00000553830 C14orf132Q9NPU4 83 aa8.3□□□□□ -1.08
PRKCH-206ENST00000553830 ETDBQ3ZM63 59 aa8.29□□□□□ -1.08
PRKCH-206ENST00000553830 JMJD7-PLA2G4BH0Y9G9 81 aa8.28□□□□□ -1.08
PRKCH-206ENST00000553830 IGFL1Q6UW32 110 aa8.28□□□□□ -1.08
PRKCH-206ENST00000553830 VPS25Q9BRG1 176 aa8.28□□□□□ -1.08
PRKCH-206ENST00000553830 HERC2O95714 4834 aa8.27□□□□□ -1.08
PRKCH-206ENST00000553830 DSCR8Q96T75 97 aa8.27□□□□□ -1.09
PRKCH-206ENST00000553830 IGLV8-61A0A075B6I0 122 aa8.26□□□□□ -1.09
PRKCH-206ENST00000553830 Q6JHZ5 121 aa8.26□□□□□ -1.09
PRKCH-206ENST00000553830 SSBP3-AS1Q7Z2R9 100 aa8.26□□□□□ -1.09
PRKCH-206ENST00000553830 TEN1Q86WV5 123 aa8.26□□□□□ -1.09
PRKCH-206ENST00000553830 OBSCN-AS1Q96MR7 158 aa8.24□□□□□ -1.09
PRKCH-206ENST00000553830 TRBV7-4A0A0J9YYF1 115 aa8.23□□□□□ -1.09
PRKCH-206ENST00000553830 OXTP01178 125 aa8.23□□□□□ -1.09
PRKCH-206ENST00000553830 LINC00304Q8N9R0 145 aa8.23□□□□□ -1.09
PRKCH-206ENST00000553830 CCKP06307 115 aa8.22□□□□□ -1.09
PRKCH-206ENST00000553830 KRTAP10-8P60410 259 aa8.22□□□□□ -1.09
PRKCH-206ENST00000553830 C4orf48Q5BLP8 95 aa8.22□□□□□ -1.09
PRKCH-206ENST00000553830 LOC110117498A0A087WWA1 95 aa8.2□□□□□ -1.1
PRKCH-206ENST00000553830 A0A1W2PNM2 257 aa8.2□□□□□ -1.1
PRKCH-206ENST00000553830 KRTAP29-1A8MX34 341 aaPredicted RBP8.2□□□□□ -1.1
PRKCH-206ENST00000553830 J3QL48 77 aa8.2□□□□□ -1.1
PRKCH-206ENST00000553830 MT1HL1P0DM35 61 aa8.2□□□□□ -1.1
PRKCH-206ENST00000553830 Q6ZQT0 140 aa8.2□□□□□ -1.1
PRKCH-206ENST00000553830 PDE6GP18545 87 aa8.17□□□□□ -1.1
PRKCH-206ENST00000553830 TRBV7-7A0A0K0K1E9 115 aa8.16□□□□□ -1.1
PRKCH-206ENST00000553830 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.1
PRKCH-206ENST00000553830 A0A087WSZ3 146 aa8.15□□□□□ -1.1
PRKCH-206ENST00000553830 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
PRKCH-206ENST00000553830 CD164Q04900 197 aa8.14□□□□□ -1.11
PRKCH-206ENST00000553830 SPAG11AQ6PDA7 123 aa8.13□□□□□ -1.11
PRKCH-206ENST00000553830 Q6Q795 121 aa8.13□□□□□ -1.11
PRKCH-206ENST00000553830 FAT3Q8TDW7 4589 aa8.13□□□□□ -1.11
PRKCH-206ENST00000553830 SPINK1P00995 79 aa8.12□□□□□ -1.11
PRKCH-206ENST00000553830 DMBT1Q9UGM3 2413 aaPredicted RBP8.12□□□□□ -1.11
PRKCH-206ENST00000553830 LIMD2Q9BT23 127 aa8.09□□□□□ -1.11
PRKCH-206ENST00000553830 MYCBP2O75592 4640 aa8.09□□□□□ -1.12
PRKCH-206ENST00000553830 C21orf62-AS1Q17RA5 79 aa8.08□□□□□ -1.12
PRKCH-206ENST00000553830 RETNLBQ9BQ08 111 aa8.07□□□□□ -1.12
PRKCH-206ENST00000553830 SS18L2Q9UHA2 77 aa8.07□□□□□ -1.12
PRKCH-206ENST00000553830 TNXBP22105 4242 aa8.07□□□□□ -1.12
PRKCH-206ENST00000553830 RPS29P62273 56 aaKnown RBP8.04□□□□□ -1.12
PRKCH-206ENST00000553830 LINC00846Q9NV44 126 aa8.04□□□□□ -1.12
PRKCH-206ENST00000553830 J3QR89 54 aa8.03□□□□□ -1.12
PRKCH-206ENST00000553830 NREPQ16612 68 aa8.03□□□□□ -1.12
PRKCH-206ENST00000553830 DEFB116Q30KQ4 102 aa8.03□□□□□ -1.12
PRKCH-206ENST00000553830 A0A1B0GW54 56 aa8.01□□□□□ -1.13
PRKCH-206ENST00000553830 C1orf195Q5TG92 126 aa8□□□□□ -1.13
PRKCH-206ENST00000553830 Q5XG85 94 aa8□□□□□ -1.13
PRKCH-206ENST00000553830 Q6ZVQ6 151 aa8□□□□□ -1.13
PRKCH-206ENST00000553830 UBL5Q9BZL1 73 aa8□□□□□ -1.13
PRKCH-206ENST00000553830 SIGMAR1Q99720 223 aa7.99□□□□□ -1.13
PRKCH-206ENST00000553830 FAM240AA0A1B0GVK7 77 aa7.98□□□□□ -1.13
PRKCH-206ENST00000553830 ACYP1P07311 99 aa7.98□□□□□ -1.13
PRKCH-206ENST00000553830 Q96NJ1 140 aa7.98□□□□□ -1.13
PRKCH-206ENST00000553830 K7ERU9 68 aa7.97□□□□□ -1.13
PRKCH-206ENST00000553830 IGKV4-1P06312 121 aa7.97□□□□□ -1.13
PRKCH-206ENST00000553830 ASB16-AS1Q495Z4 193 aa7.97□□□□□ -1.13
PRKCH-206ENST00000553830 PRR4Q16378 134 aa7.96□□□□□ -1.14
PRKCH-206ENST00000553830 LINC00472Q9H8W2 130 aa7.96□□□□□ -1.14
PRKCH-206ENST00000553830 PCLOQ9Y6V0 5065 aa7.96□□□□□ -1.14
PRKCH-206ENST00000553830 BPY2O14599 106 aa7.93□□□□□ -1.14
PRKCH-206ENST00000553830 IGKV3D-7A0A0C4DH55 119 aa7.91□□□□□ -1.14
PRKCH-206ENST00000553830 IGLV7-46A0A075B6I9 117 aa7.9□□□□□ -1.14
PRKCH-206ENST00000553830 J3KT08 172 aa7.89□□□□□ -1.15
PRKCH-206ENST00000553830 FP248Q71RG6 208 aaPredicted RBP7.88□□□□□ -1.15
PRKCH-206ENST00000553830 Q8N9L7 120 aa7.88□□□□□ -1.15
PRKCH-206ENST00000553830 CDIP1Q9H305 208 aa7.88□□□□□ -1.15
PRKCH-206ENST00000553830 IGHV6-1A0A0B4J1U7 121 aa7.87□□□□□ -1.15
PRKCH-206ENST00000553830 C9orf92A6NGG3 77 aa7.87□□□□□ -1.15
PRKCH-206ENST00000553830 DSCR10P59022 87 aa7.86□□□□□ -1.15
PRKCH-206ENST00000553830 A8MWP4 228 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms