RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 Q6ZRX8 168 aa9.96□□□□□ -0.82
ACTN1-209ENST00000553659 CCKP06307 115 aa9.95□□□□□ -0.82
ACTN1-209ENST00000553659 SPACA4Q8TDM5 124 aa9.95□□□□□ -0.82
ACTN1-209ENST00000553659 LOC110117498A0A087WWA1 95 aa9.94□□□□□ -0.82
ACTN1-209ENST00000553659 B5MCH6 92 aa9.94□□□□□ -0.82
ACTN1-209ENST00000553659 KRTAP4-16G5E9R7 235 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-209ENST00000553659 CHTF8P0CG12 524 aa9.94□□□□□ -0.82
ACTN1-209ENST00000553659 REG3GQ6UW15 175 aa9.94□□□□□ -0.82
ACTN1-209ENST00000553659 KRTAP7-1Q8IUC3 87 aa9.94□□□□□ -0.82
ACTN1-209ENST00000553659 IGKV2-24A0A0C4DH68 120 aa9.93□□□□□ -0.82
ACTN1-209ENST00000553659 LINC00643Q86TS7 51 aa9.93□□□□□ -0.82
ACTN1-209ENST00000553659 PLAC8Q9NZF1 115 aa9.93□□□□□ -0.82
ACTN1-209ENST00000553659 RPL37AP8A6NKH3 93 aa9.92□□□□□ -0.82
ACTN1-209ENST00000553659 MT-ATP8P03928 68 aa9.92□□□□□ -0.82
ACTN1-209ENST00000553659 Q6Q795 121 aa9.92□□□□□ -0.82
ACTN1-209ENST00000553659 DSCR8Q96T75 97 aa9.92□□□□□ -0.82
ACTN1-209ENST00000553659 PCP4P48539 62 aa9.9□□□□□ -0.82
ACTN1-209ENST00000553659 A0A1W2PNN7 141 aa9.89□□□□□ -0.83
ACTN1-209ENST00000553659 NDUFV3P56181 108 aaKnown RBP9.89□□□□□ -0.83
ACTN1-209ENST00000553659 IMUPQ9GZP8 106 aa9.88□□□□□ -0.83
ACTN1-209ENST00000553659 Q6ZQT0 140 aa9.87□□□□□ -0.83
ACTN1-209ENST00000553659 UBE2BP63146 152 aa9.86□□□□□ -0.83
ACTN1-209ENST00000553659 IGLV5-48A0A075B6I7 105 aa9.85□□□□□ -0.83
ACTN1-209ENST00000553659 TRBV7-4A0A0J9YYF1 115 aa9.85□□□□□ -0.83
ACTN1-209ENST00000553659 TRBV7-7A0A0K0K1E9 115 aa9.85□□□□□ -0.83
ACTN1-209ENST00000553659 H0Y9J4 135 aa9.85□□□□□ -0.83
ACTN1-209ENST00000553659 ATP5EP2Q5VTU8 51 aa9.84□□□□□ -0.83
ACTN1-209ENST00000553659 Q9BRP9 147 aa9.84□□□□□ -0.83
ACTN1-209ENST00000553659 A0A1B0GV72 72 aa9.82□□□□□ -0.84
ACTN1-209ENST00000553659 Q6JHZ5 121 aa9.82□□□□□ -0.84
ACTN1-209ENST00000553659 FAM19A1Q7Z5A9 133 aa9.82□□□□□ -0.84
ACTN1-209ENST00000553659 UBL5Q9BZL1 73 aa9.82□□□□□ -0.84
ACTN1-209ENST00000553659 A0A1B0GW54 56 aa9.81□□□□□ -0.84
ACTN1-209ENST00000553659 SMCR5Q8TEV8 140 aa9.81□□□□□ -0.84
ACTN1-209ENST00000553659 LINC00846Q9NV44 126 aa9.81□□□□□ -0.84
ACTN1-209ENST00000553659 LINC01547P58512 204 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-209ENST00000553659 PHF5AQ7RTV0 110 aaKnown RBP9.8□□□□□ -0.84
ACTN1-209ENST00000553659 Q8N377 158 aa9.8□□□□□ -0.84
ACTN1-209ENST00000553659 TNXBP22105 4242 aa9.8□□□□□ -0.84
ACTN1-209ENST00000553659 LRP2P98164 4655 aa9.8□□□□□ -0.84
ACTN1-209ENST00000553659 KRTAP10-8P60410 259 aa9.79□□□□□ -0.84
ACTN1-209ENST00000553659 SPINK6Q6UWN8 80 aa9.79□□□□□ -0.84
ACTN1-209ENST00000553659 DEFB105AQ8NG35 78 aa9.78□□□□□ -0.84
ACTN1-209ENST00000553659 BCE1O60756 84 aa9.76□□□□□ -0.85
ACTN1-209ENST00000553659 F8WEM9 126 aa9.75□□□□□ -0.85
ACTN1-209ENST00000553659 UBE2AP49459 152 aa9.75□□□□□ -0.85
ACTN1-209ENST00000553659 PRLHP81277 87 aa9.73□□□□□ -0.85
ACTN1-209ENST00000553659 RNF213Q63HN8 5207 aa9.72□□□□□ -0.85
ACTN1-209ENST00000553659 ERC2-IT1O76042 136 aa9.72□□□□□ -0.85
ACTN1-209ENST00000553659 ST20-AS1Q8NBB2 130 aa9.72□□□□□ -0.85
ACTN1-209ENST00000553659 HIGD2AQ9BW72 106 aa9.72□□□□□ -0.85
ACTN1-209ENST00000553659 SPRR1BP22528 89 aa9.71□□□□□ -0.86
ACTN1-209ENST00000553659 C1orf137Q5JT78 98 aa9.69□□□□□ -0.86
ACTN1-209ENST00000553659 IGLV8-61A0A075B6I0 122 aa9.67□□□□□ -0.86
ACTN1-209ENST00000553659 CXCL6P80162 114 aa9.67□□□□□ -0.86
ACTN1-209ENST00000553659 Q6ZVQ6 151 aa9.67□□□□□ -0.86
ACTN1-209ENST00000553659 KRTAP13-1Q8IUC0 172 aa9.67□□□□□ -0.86
ACTN1-209ENST00000553659 IGKV3D-7A0A0C4DH55 119 aa9.66□□□□□ -0.86
ACTN1-209ENST00000553659 SMIM29Q86T20 159 aa9.66□□□□□ -0.86
ACTN1-209ENST00000553659 KRTAP11-1Q8IUC1 163 aa9.66□□□□□ -0.86
ACTN1-209ENST00000553659 ZNF706Q9Y5V0 76 aaPredicted RBP9.66□□□□□ -0.86
ACTN1-209ENST00000553659 Q8NBF4 154 aa9.65□□□□□ -0.86
ACTN1-209ENST00000553659 ANAPC13Q9BS18 74 aa9.65□□□□□ -0.86
ACTN1-209ENST00000553659 C3orf22Q8N5N4 141 aa9.63□□□□□ -0.87
ACTN1-209ENST00000553659 SPRR4Q96PI1 79 aa9.63□□□□□ -0.87
ACTN1-209ENST00000553659 FAM236AA0A1B0GUQ0 79 aa9.62□□□□□ -0.87
ACTN1-209ENST00000553659 FAM236BA0A1B0GV22 79 aa9.62□□□□□ -0.87
ACTN1-209ENST00000553659 NREPQ16612 68 aa9.62□□□□□ -0.87
ACTN1-209ENST00000553659 PSORS1C2Q9UIG4 136 aa9.62□□□□□ -0.87
ACTN1-209ENST00000553659 A0A1W2PNM2 257 aa9.59□□□□□ -0.87
ACTN1-209ENST00000553659 ATOX1O00244 68 aa9.59□□□□□ -0.87
ACTN1-209ENST00000553659 HIST1H4AP62805 103 aaKnown RBP9.59□□□□□ -0.87
ACTN1-209ENST00000553659 CRYGAP11844 174 aa9.58□□□□□ -0.88
ACTN1-209ENST00000553659 ZNF861PO60384 105 aa9.57□□□□□ -0.88
ACTN1-209ENST00000553659 LINC00483Q53H64 154 aa9.56□□□□□ -0.88
ACTN1-209ENST00000553659 IGFL1Q6UW32 110 aa9.56□□□□□ -0.88
ACTN1-209ENST00000553659 IGLV7-43P04211 117 aa9.54□□□□□ -0.88
ACTN1-209ENST00000553659 BPY2O14599 106 aa9.53□□□□□ -0.88
ACTN1-209ENST00000553659 PRR26Q8N8Z3 221 aa9.53□□□□□ -0.88
ACTN1-209ENST00000553659 LPAP08519 4548 aa9.51□□□□□ -0.89
ACTN1-209ENST00000553659 A0A087WVE0 104 aa9.49□□□□□ -0.89
ACTN1-209ENST00000553659 SMIM20Q8N5G0 67 aa9.49□□□□□ -0.89
ACTN1-209ENST00000553659 KRTAP1-4P0C5Y4 121 aa9.45□□□□□ -0.9
ACTN1-209ENST00000553659 UQCRQO14949 82 aa9.44□□□□□ -0.9
ACTN1-209ENST00000553659 C9orf153Q5TBE3 101 aa9.44□□□□□ -0.9
ACTN1-209ENST00000553659 A0A087WSZ3 146 aa9.43□□□□□ -0.9
ACTN1-209ENST00000553659 COX7CP15954 63 aa9.43□□□□□ -0.9
ACTN1-209ENST00000553659 SERP2Q8N6R1 65 aa9.42□□□□□ -0.9
ACTN1-209ENST00000553659 IGKV4-1P06312 121 aa9.41□□□□□ -0.9
ACTN1-209ENST00000553659 SS18L2Q9UHA2 77 aa9.41□□□□□ -0.9
ACTN1-209ENST00000553659 IGLV9-49A0A0B4J1Y8 123 aa9.4□□□□□ -0.9
ACTN1-209ENST00000553659 PRR4Q16378 134 aa9.39□□□□□ -0.91
ACTN1-209ENST00000553659 J3KT08 172 aa9.38□□□□□ -0.91
ACTN1-209ENST00000553659 CCDC179H3BU77 68 aa9.37□□□□□ -0.91
ACTN1-209ENST00000553659 TRAV7A0A075B6U4 112 aa9.36□□□□□ -0.91
ACTN1-209ENST00000553659 A0A0G2JQZ4 141 aa9.35□□□□□ -0.91
ACTN1-209ENST00000553659 MOBPQ13875 183 aa9.35□□□□□ -0.91
ACTN1-209ENST00000553659 SSBP3-AS1Q7Z2R9 100 aa9.35□□□□□ -0.91
ACTN1-209ENST00000553659 DSCR10P59022 87 aa9.34□□□□□ -0.91
ACTN1-209ENST00000553659 FAM229BQ4G0N7 80 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms