RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 KRTAP10-1P60331 282 aa3.13□□□□□ -1.91
VTI1B-202ENST00000553619 GAGE2AQ6NT46 116 aa3.13□□□□□ -1.91
VTI1B-202ENST00000553619 Q6ZSA8 131 aa3.13□□□□□ -1.91
VTI1B-202ENST00000553619 NAA38Q9BRA0 125 aaKnown RBP3.13□□□□□ -1.91
VTI1B-202ENST00000553619 TRBV7-7A0A0K0K1E9 115 aa3.12□□□□□ -1.91
VTI1B-202ENST00000553619 H0Y9J4 135 aa3.12□□□□□ -1.91
VTI1B-202ENST00000553619 PANO1I0J062 215 aa3.12□□□□□ -1.91
VTI1B-202ENST00000553619 LST1O00453 97 aa3.12□□□□□ -1.91
VTI1B-202ENST00000553619 TCL1BO95988 128 aa3.12□□□□□ -1.91
VTI1B-202ENST00000553619 CRYGAP11844 174 aa3.12□□□□□ -1.91
VTI1B-202ENST00000553619 SPRR1AP35321 89 aa3.12□□□□□ -1.91
VTI1B-202ENST00000553619 UBE2AP49459 152 aa3.12□□□□□ -1.91
VTI1B-202ENST00000553619 ELOF1P60002 83 aaKnown RBP3.12□□□□□ -1.91
VTI1B-202ENST00000553619 PLECQ15149 4684 aaKnown RBP3.12□□□□□ -1.91
VTI1B-202ENST00000553619 LINC00575Q6W349 94 aa3.12□□□□□ -1.91
VTI1B-202ENST00000553619 FAM19A1Q7Z5A9 133 aa3.12□□□□□ -1.91
VTI1B-202ENST00000553619 KRTAP7-1Q8IUC3 87 aa3.12□□□□□ -1.91
VTI1B-202ENST00000553619 CIRBP-AS1Q8TBR5 109 aa3.12□□□□□ -1.91
VTI1B-202ENST00000553619 DNAH6Q9C0G6 4158 aa3.11□□□□□ -1.91
VTI1B-202ENST00000553619 TMEM256-PLSCR3K7ERE1 68 aa3.11□□□□□ -1.91
VTI1B-202ENST00000553619 BCE1O60756 84 aa3.11□□□□□ -1.91
VTI1B-202ENST00000553619 CD164Q04900 197 aa3.11□□□□□ -1.91
VTI1B-202ENST00000553619 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.11□□□□□ -1.91
VTI1B-202ENST00000553619 Q6ZRX8 168 aa3.11□□□□□ -1.91
VTI1B-202ENST00000553619 SCXQ7RTU7 201 aa3.11□□□□□ -1.91
VTI1B-202ENST00000553619 ANKRD29Q8N6D5 301 aa3.11□□□□□ -1.91
VTI1B-202ENST00000553619 CLEC2BQ92478 149 aa3.11□□□□□ -1.91
VTI1B-202ENST00000553619 LINC01600Q96MT4 127 aa3.11□□□□□ -1.91
VTI1B-202ENST00000553619 PRO0461Q9UI25 63 aa3.11□□□□□ -1.91
VTI1B-202ENST00000553619 KMT2AQ03164 3969 aa3.11□□□□□ -1.91
VTI1B-202ENST00000553619 KRTAP4-16G5E9R7 235 aaPredicted RBP3.1□□□□□ -1.91
VTI1B-202ENST00000553619 ATOX1O00244 68 aa3.1□□□□□ -1.91
VTI1B-202ENST00000553619 BAALC-AS2P0C853 105 aa3.1□□□□□ -1.91
VTI1B-202ENST00000553619 COX7CP15954 63 aa3.1□□□□□ -1.91
VTI1B-202ENST00000553619 C1orf137Q5JT78 98 aa3.1□□□□□ -1.91
VTI1B-202ENST00000553619 ORMDL1Q9P0S3 153 aa3.1□□□□□ -1.91
VTI1B-202ENST00000553619 KMT2CQ8NEZ4 4911 aaKnown RBP3.09□□□□□ -1.91
VTI1B-202ENST00000553619 LYSTQ99698 3801 aa3.09□□□□□ -1.91
VTI1B-202ENST00000553619 VPS13DQ5THJ4 4388 aa3.09□□□□□ -1.91
VTI1B-202ENST00000553619 BIRC6Q9NR09 4857 aa3.09□□□□□ -1.91
VTI1B-202ENST00000553619 H3BT86 120 aa3.09□□□□□ -1.91
VTI1B-202ENST00000553619 ZNF861PO60384 105 aa3.09□□□□□ -1.91
VTI1B-202ENST00000553619 SMCR5Q8TEV8 140 aa3.09□□□□□ -1.91
VTI1B-202ENST00000553619 PSORS1C2Q9UIG4 136 aa3.09□□□□□ -1.91
VTI1B-202ENST00000553619 ZNF706Q9Y5V0 76 aaPredicted RBP3.09□□□□□ -1.91
VTI1B-202ENST00000553619 IGLV7-43P04211 117 aa3.08□□□□□ -1.92
VTI1B-202ENST00000553619 C4orf26Q17RF5 130 aa3.08□□□□□ -1.92
VTI1B-202ENST00000553619 FAM218AQ96MZ4 157 aa3.08□□□□□ -1.92
VTI1B-202ENST00000553619 HIGD2AQ9BW72 106 aa3.08□□□□□ -1.92
VTI1B-202ENST00000553619 SMIM26A0A096LP01 95 aa3.07□□□□□ -1.92
VTI1B-202ENST00000553619 A0A0U1RQV1 116 aa3.07□□□□□ -1.92
VTI1B-202ENST00000553619 TEX49A0A1B0GTD5 131 aa3.07□□□□□ -1.92
VTI1B-202ENST00000553619 JMJD7-PLA2G4BH0Y9G9 81 aa3.07□□□□□ -1.92
VTI1B-202ENST00000553619 CDK2AP2O75956 126 aa3.07□□□□□ -1.92
VTI1B-202ENST00000553619 RPL37AP61513 92 aaKnown RBP3.07□□□□□ -1.92
VTI1B-202ENST00000553619 PRLHP81277 87 aa3.07□□□□□ -1.92
VTI1B-202ENST00000553619 Q6ZQY7 126 aa3.07□□□□□ -1.92
VTI1B-202ENST00000553619 PMAIP1Q13794 54 aa3.06□□□□□ -1.92
VTI1B-202ENST00000553619 RYR3Q15413 4870 aa3.06□□□□□ -1.92
VTI1B-202ENST00000553619 SPINK6Q6UWN8 80 aa3.06□□□□□ -1.92
VTI1B-202ENST00000553619 HRCT1Q6UXD1 115 aa3.06□□□□□ -1.92
VTI1B-202ENST00000553619 LINC00643Q86TS7 51 aa3.06□□□□□ -1.92
VTI1B-202ENST00000553619 KRTAP11-1Q8IUC1 163 aa3.06□□□□□ -1.92
VTI1B-202ENST00000553619 DEFB105AQ8NG35 78 aa3.06□□□□□ -1.92
VTI1B-202ENST00000553619 Q9BRP9 147 aa3.06□□□□□ -1.92
VTI1B-202ENST00000553619 SERP1Q9Y6X1 66 aa3.06□□□□□ -1.92
VTI1B-202ENST00000553619 DNAH1Q9P2D7 4330 aa3.05□□□□□ -1.92
VTI1B-202ENST00000553619 F8WEM9 126 aa3.05□□□□□ -1.92
VTI1B-202ENST00000553619 PDE6GP18545 87 aa3.05□□□□□ -1.92
VTI1B-202ENST00000553619 ATP5EP56381 51 aaPredicted RBP3.05□□□□□ -1.92
VTI1B-202ENST00000553619 RBM3P98179 157 aaKnown RBP3.05□□□□□ -1.92
VTI1B-202ENST00000553619 Q5XG85 94 aa3.05□□□□□ -1.92
VTI1B-202ENST00000553619 KRTAP13-1Q8IUC0 172 aa3.05□□□□□ -1.92
VTI1B-202ENST00000553619 IGLV5-48A0A075B6I7 105 aa3.04□□□□□ -1.92
VTI1B-202ENST00000553619 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
VTI1B-202ENST00000553619 FAM236DA0A1B0GTK5 79 aa3.04□□□□□ -1.92
VTI1B-202ENST00000553619 FAM236AA0A1B0GUQ0 79 aa3.04□□□□□ -1.92
VTI1B-202ENST00000553619 FAM236BA0A1B0GV22 79 aa3.04□□□□□ -1.92
VTI1B-202ENST00000553619 SMR3BP02814 79 aaPredicted RBP3.04□□□□□ -1.92
VTI1B-202ENST00000553619 FAM236CP0DP71 79 aa3.04□□□□□ -1.92
VTI1B-202ENST00000553619 SPRR1BP22528 89 aa3.04□□□□□ -1.92
VTI1B-202ENST00000553619 KRTAP10-5P60370 271 aa3.04□□□□□ -1.92
VTI1B-202ENST00000553619 DSCR8Q96T75 97 aa3.04□□□□□ -1.92
VTI1B-202ENST00000553619 ERC2-IT1O76042 136 aa3.03□□□□□ -1.92
VTI1B-202ENST00000553619 HAMPP81172 84 aa3.03□□□□□ -1.92
VTI1B-202ENST00000553619 Q8N377 158 aa3.03□□□□□ -1.92
VTI1B-202ENST00000553619 SERP2Q8N6R1 65 aa3.03□□□□□ -1.92
VTI1B-202ENST00000553619 SPRR4Q96PI1 79 aa3.03□□□□□ -1.92
VTI1B-202ENST00000553619 LINC01547P58512 204 aaPredicted RBP3.02□□□□□ -1.93
VTI1B-202ENST00000553619 Q6JHZ5 121 aa3.02□□□□□ -1.93
VTI1B-202ENST00000553619 SSBP3-AS1Q7Z2R9 100 aa3.02□□□□□ -1.93
VTI1B-202ENST00000553619 ST20-AS1Q8NBB2 130 aa3.02□□□□□ -1.93
VTI1B-202ENST00000553619 DNAH17Q9UFH2 4485 aa3.02□□□□□ -1.93
VTI1B-202ENST00000553619 A0A1B0GW54 56 aa3.01□□□□□ -1.93
VTI1B-202ENST00000553619 NDUFC1O43677 76 aa3.01□□□□□ -1.93
VTI1B-202ENST00000553619 FAM229BQ4G0N7 80 aa3.01□□□□□ -1.93
VTI1B-202ENST00000553619 LINC00483Q53H64 154 aa3.01□□□□□ -1.93
VTI1B-202ENST00000553619 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
VTI1B-202ENST00000553619 OBSCN-AS1Q96MR7 158 aa3.01□□□□□ -1.93
VTI1B-202ENST00000553619 FRAS1Q86XX4 4008 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms