RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 FAT1Q14517 4588 aa8.32□□□□□ -1.08
APEX1-205ENST00000553555 NDUFV3P56181 108 aaKnown RBP8.31□□□□□ -1.08
APEX1-205ENST00000553555 GAGE2AQ6NT46 116 aa8.31□□□□□ -1.08
APEX1-205ENST00000553555 OBSCN-AS1Q96MR7 158 aa8.31□□□□□ -1.08
APEX1-205ENST00000553555 SPRR4Q96PI1 79 aa8.31□□□□□ -1.08
APEX1-205ENST00000553555 RYR1P21817 5038 aa8.31□□□□□ -1.08
APEX1-205ENST00000553555 SMIM29Q86T20 159 aa8.3□□□□□ -1.08
APEX1-205ENST00000553555 ZNF706Q9Y5V0 76 aaPredicted RBP8.3□□□□□ -1.08
APEX1-205ENST00000553555 JMJD7-PLA2G4BH0Y9G9 81 aa8.29□□□□□ -1.08
APEX1-205ENST00000553555 C3orf22Q8N5N4 141 aa8.29□□□□□ -1.08
APEX1-205ENST00000553555 HSPG2P98160 4391 aa8.29□□□□□ -1.08
APEX1-205ENST00000553555 KRTAP10-4P60372 401 aaPredicted RBP8.28□□□□□ -1.08
APEX1-205ENST00000553555 LINC00483Q53H64 154 aa8.27□□□□□ -1.09
APEX1-205ENST00000553555 RBM3P98179 157 aaKnown RBP8.26□□□□□ -1.09
APEX1-205ENST00000553555 CDIP1Q9H305 208 aa8.26□□□□□ -1.09
APEX1-205ENST00000553555 FAM229AH3BQW9 127 aa8.25□□□□□ -1.09
APEX1-205ENST00000553555 SPINK6Q6UWN8 80 aa8.25□□□□□ -1.09
APEX1-205ENST00000553555 ANAPC11Q9NYG5 84 aa8.23□□□□□ -1.09
APEX1-205ENST00000553555 F8WEM9 126 aa8.22□□□□□ -1.09
APEX1-205ENST00000553555 PLA2G1BP04054 148 aaKnown RBP8.22□□□□□ -1.09
APEX1-205ENST00000553555 PKHD1L1Q86WI1 4243 aa8.22□□□□□ -1.09
APEX1-205ENST00000553555 KIAA1109Q2LD37 5005 aa8.22□□□□□ -1.09
APEX1-205ENST00000553555 IGLV8-61A0A075B6I0 122 aa8.21□□□□□ -1.09
APEX1-205ENST00000553555 TRBV7-4A0A0J9YYF1 115 aa8.21□□□□□ -1.09
APEX1-205ENST00000553555 ACYP1P07311 99 aa8.21□□□□□ -1.09
APEX1-205ENST00000553555 DSCR8Q96T75 97 aa8.21□□□□□ -1.09
APEX1-205ENST00000553555 LOC110117498A0A087WWA1 95 aa8.21□□□□□ -1.1
APEX1-205ENST00000553555 FAM240AA0A1B0GVK7 77 aa8.21□□□□□ -1.1
APEX1-205ENST00000553555 CCKP06307 115 aa8.21□□□□□ -1.1
APEX1-205ENST00000553555 KRTAP1-4P0C5Y4 121 aa8.19□□□□□ -1.1
APEX1-205ENST00000553555 Q5VSD8 79 aa8.19□□□□□ -1.1
APEX1-205ENST00000553555 Q6ZQT0 140 aa8.19□□□□□ -1.1
APEX1-205ENST00000553555 PDE6GP18545 87 aa8.18□□□□□ -1.1
APEX1-205ENST00000553555 KRTAP17-1Q9BYP8 105 aa8.18□□□□□ -1.1
APEX1-205ENST00000553555 IGLV9-49A0A0B4J1Y8 123 aa8.18□□□□□ -1.1
APEX1-205ENST00000553555 MT-ATP8P03928 68 aa8.18□□□□□ -1.1
APEX1-205ENST00000553555 FAM229BQ4G0N7 80 aa8.17□□□□□ -1.1
APEX1-205ENST00000553555 Q6Q795 121 aa8.16□□□□□ -1.1
APEX1-205ENST00000553555 Q8N1X5 172 aa8.16□□□□□ -1.1
APEX1-205ENST00000553555 C9orf153Q5TBE3 101 aa8.15□□□□□ -1.1
APEX1-205ENST00000553555 Q6JHZ5 121 aa8.15□□□□□ -1.1
APEX1-205ENST00000553555 IGFL1Q6UW32 110 aa8.15□□□□□ -1.1
APEX1-205ENST00000553555 LINC00846Q9NV44 126 aa8.14□□□□□ -1.11
APEX1-205ENST00000553555 A0A087X002 238 aa8.14□□□□□ -1.11
APEX1-205ENST00000553555 A0A0G2JQZ4 141 aa8.14□□□□□ -1.11
APEX1-205ENST00000553555 MOBPQ13875 183 aa8.14□□□□□ -1.11
APEX1-205ENST00000553555 Q8NBF4 154 aa8.14□□□□□ -1.11
APEX1-205ENST00000553555 CRYGAP11844 174 aa8.13□□□□□ -1.11
APEX1-205ENST00000553555 BIRC6Q9NR09 4857 aa8.12□□□□□ -1.11
APEX1-205ENST00000553555 A0A1W2PNM2 257 aa8.12□□□□□ -1.11
APEX1-205ENST00000553555 KRTAP13-2Q52LG2 175 aa8.12□□□□□ -1.11
APEX1-205ENST00000553555 SSBP3-AS1Q7Z2R9 100 aa8.11□□□□□ -1.11
APEX1-205ENST00000553555 ANAPC13Q9BS18 74 aa8.11□□□□□ -1.11
APEX1-205ENST00000553555 LINC00643Q86TS7 51 aa8.09□□□□□ -1.11
APEX1-205ENST00000553555 A0A1B0GW54 56 aa8.07□□□□□ -1.12
APEX1-205ENST00000553555 UBL5Q9BZL1 73 aa8.07□□□□□ -1.12
APEX1-205ENST00000553555 PRR26Q8N8Z3 221 aa8.06□□□□□ -1.12
APEX1-205ENST00000553555 IGKV3D-7A0A0C4DH55 119 aa8.05□□□□□ -1.12
APEX1-205ENST00000553555 TYMSOSQ8TAI1 123 aa8.04□□□□□ -1.12
APEX1-205ENST00000553555 IMUPQ9GZP8 106 aa8.04□□□□□ -1.12
APEX1-205ENST00000553555 HRCT1Q6UXD1 115 aa8.03□□□□□ -1.12
APEX1-205ENST00000553555 TRBV7-7A0A0K0K1E9 115 aa8.02□□□□□ -1.13
APEX1-205ENST00000553555 CD164Q04900 197 aa8.02□□□□□ -1.13
APEX1-205ENST00000553555 Q6ZVQ6 151 aa8.01□□□□□ -1.13
APEX1-205ENST00000553555 FAT3Q8TDW7 4589 aa8.01□□□□□ -1.13
APEX1-205ENST00000553555 FLG2Q5D862 2391 aaPredicted RBP8.01□□□□□ -1.13
APEX1-205ENST00000553555 A0A087WSZ3 146 aa8□□□□□ -1.13
APEX1-205ENST00000553555 SVIPQ8NHG7 77 aa8□□□□□ -1.13
APEX1-205ENST00000553555 LRP1Q07954 4544 aaKnown RBP8□□□□□ -1.13
APEX1-205ENST00000553555 NREPQ16612 68 aa7.99□□□□□ -1.13
APEX1-205ENST00000553555 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
APEX1-205ENST00000553555 HERC2O95714 4834 aa7.98□□□□□ -1.13
APEX1-205ENST00000553555 HIST1H4AP62805 103 aaKnown RBP7.97□□□□□ -1.13
APEX1-205ENST00000553555 KRTAP10-8P60410 259 aa7.96□□□□□ -1.14
APEX1-205ENST00000553555 C4orf48Q5BLP8 95 aa7.96□□□□□ -1.14
APEX1-205ENST00000553555 TNXBP22105 4242 aa7.96□□□□□ -1.14
APEX1-205ENST00000553555 LINC00304Q8N9R0 145 aa7.95□□□□□ -1.14
APEX1-205ENST00000553555 ATP5EP2Q5VTU8 51 aa7.94□□□□□ -1.14
APEX1-205ENST00000553555 SS18L2Q9UHA2 77 aa7.94□□□□□ -1.14
APEX1-205ENST00000553555 SPAG11AQ6PDA7 123 aa7.93□□□□□ -1.14
APEX1-205ENST00000553555 A0A087WVE0 104 aa7.92□□□□□ -1.14
APEX1-205ENST00000553555 SPINK1P00995 79 aa7.92□□□□□ -1.14
APEX1-205ENST00000553555 Q5XG85 94 aa7.92□□□□□ -1.14
APEX1-205ENST00000553555 FAM236AA0A1B0GUQ0 79 aa7.9□□□□□ -1.14
APEX1-205ENST00000553555 FAM236BA0A1B0GV22 79 aa7.9□□□□□ -1.14
APEX1-205ENST00000553555 CXCL6P80162 114 aa7.9□□□□□ -1.14
APEX1-205ENST00000553555 LINC00472Q9H8W2 130 aa7.9□□□□□ -1.14
APEX1-205ENST00000553555 MYCBP2O75592 4640 aa7.9□□□□□ -1.15
APEX1-205ENST00000553555 BPY2O14599 106 aa7.89□□□□□ -1.15
APEX1-205ENST00000553555 ASB16-AS1Q495Z4 193 aa7.89□□□□□ -1.15
APEX1-205ENST00000553555 OXTP01178 125 aa7.89□□□□□ -1.15
APEX1-205ENST00000553555 RPS29P62273 56 aaKnown RBP7.89□□□□□ -1.15
APEX1-205ENST00000553555 Q96NJ1 140 aa7.89□□□□□ -1.15
APEX1-205ENST00000553555 LIMD2Q9BT23 127 aa7.89□□□□□ -1.15
APEX1-205ENST00000553555 DEFB116Q30KQ4 102 aa7.88□□□□□ -1.15
APEX1-205ENST00000553555 ABCA13Q86UQ4 5058 aa7.87□□□□□ -1.15
APEX1-205ENST00000553555 CCDC179H3BU77 68 aa7.87□□□□□ -1.15
APEX1-205ENST00000553555 MT1HL1P0DM35 61 aa7.87□□□□□ -1.15
APEX1-205ENST00000553555 Q8N9L7 120 aa7.86□□□□□ -1.15
APEX1-205ENST00000553555 DMBT1Q9UGM3 2413 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms