RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 C7orf33Q8WU49 177 aa3.24□□□□□ -1.89
PFDN5-219ENST00000553171 RPL36ALQ969Q0 106 aaKnown RBP3.24□□□□□ -1.89
PFDN5-219ENST00000553171 KLK15Q9H2R5 256 aa3.24□□□□□ -1.89
PFDN5-219ENST00000553171 IGLV4-3A0A075B6K6 122 aa3.23□□□□□ -1.89
PFDN5-219ENST00000553171 IGHV3-66A0A0C4DH42 116 aa3.23□□□□□ -1.89
PFDN5-219ENST00000553171 A0A1B0GVY2 172 aa3.23□□□□□ -1.89
PFDN5-219ENST00000553171 LRCOL1A6NCL2 159 aa3.23□□□□□ -1.89
PFDN5-219ENST00000553171 PRAC2D3DTV9 90 aa3.23□□□□□ -1.89
PFDN5-219ENST00000553171 GAS8-AS1O95177 125 aa3.23□□□□□ -1.89
PFDN5-219ENST00000553171 IGHV3-23P01764 117 aa3.23□□□□□ -1.89
PFDN5-219ENST00000553171 RNASE3P12724 160 aaKnown RBP3.23□□□□□ -1.89
PFDN5-219ENST00000553171 LINC01547P58512 204 aaPredicted RBP3.23□□□□□ -1.89
PFDN5-219ENST00000553171 ODF3L2Q3SX64 289 aa3.23□□□□□ -1.89
PFDN5-219ENST00000553171 WFDC9Q8NEX5 89 aa3.23□□□□□ -1.89
PFDN5-219ENST00000553171 LINC00208Q96KT6 92 aa3.23□□□□□ -1.89
PFDN5-219ENST00000553171 LINC01558Q9Y6Z2 57 aa3.23□□□□□ -1.89
PFDN5-219ENST00000553171 MYCBP2O75592 4640 aa3.23□□□□□ -1.89
PFDN5-219ENST00000553171 IGLV10-54A0A075B6I4 117 aa3.22□□□□□ -1.89
PFDN5-219ENST00000553171 TRBV10-1A0A0K0K1A3 114 aa3.22□□□□□ -1.89
PFDN5-219ENST00000553171 H3BQ85 93 aa3.22□□□□□ -1.89
PFDN5-219ENST00000553171 M0QY20 66 aa3.22□□□□□ -1.89
PFDN5-219ENST00000553171 NDUFA1O15239 70 aa3.22□□□□□ -1.89
PFDN5-219ENST00000553171 LINC00315P59091 139 aa3.22□□□□□ -1.89
PFDN5-219ENST00000553171 SUMO4Q6EEV6 95 aa3.22□□□□□ -1.89
PFDN5-219ENST00000553171 Q8NAQ8 132 aa3.22□□□□□ -1.89
PFDN5-219ENST00000553171 ZCCHC13Q8WW36 166 aaKnown RBP3.22□□□□□ -1.89
PFDN5-219ENST00000553171 RPL39LQ96EH5 51 aaKnown RBP3.22□□□□□ -1.89
PFDN5-219ENST00000553171 LITAFQ99732 161 aa3.22□□□□□ -1.89
PFDN5-219ENST00000553171 CRCT1Q9UGL9 99 aa3.22□□□□□ -1.89
PFDN5-219ENST00000553171 FAT2Q9NYQ8 4349 aa3.21□□□□□ -1.9
PFDN5-219ENST00000553171 LY6G6CO95867 125 aa3.21□□□□□ -1.9
PFDN5-219ENST00000553171 IGLV1-40P01703 118 aa3.21□□□□□ -1.9
PFDN5-219ENST00000553171 CNBPP62633 177 aaKnown RBP3.21□□□□□ -1.9
PFDN5-219ENST00000553171 NDPQ00604 133 aa3.21□□□□□ -1.9
PFDN5-219ENST00000553171 SPAG11BQ08648 103 aa3.21□□□□□ -1.9
PFDN5-219ENST00000553171 DEFB114Q30KQ6 69 aa3.21□□□□□ -1.9
PFDN5-219ENST00000553171 CSAG1Q6PB30 78 aa3.21□□□□□ -1.9
PFDN5-219ENST00000553171 SPAG11AQ6PDA7 123 aa3.21□□□□□ -1.9
PFDN5-219ENST00000553171 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.21□□□□□ -1.9
PFDN5-219ENST00000553171 PLAC8Q9NZF1 115 aa3.21□□□□□ -1.9
PFDN5-219ENST00000553171 LOC110117498A0A087WWA1 95 aa3.2□□□□□ -1.9
PFDN5-219ENST00000553171 A0A1W2PNM2 257 aa3.2□□□□□ -1.9
PFDN5-219ENST00000553171 KRTAP23-1A1A580 65 aa3.2□□□□□ -1.9
PFDN5-219ENST00000553171 A6NDX4 124 aa3.2□□□□□ -1.9
PFDN5-219ENST00000553171 DNAH10OSP0CZ25 163 aa3.2□□□□□ -1.9
PFDN5-219ENST00000553171 COX7B2Q8TF08 81 aa3.2□□□□□ -1.9
PFDN5-219ENST00000553171 ZNF625Q96I27 306 aaPredicted RBP3.2□□□□□ -1.9
PFDN5-219ENST00000553171 DHRS4-AS1Q9P1J3 65 aa3.2□□□□□ -1.9
PFDN5-219ENST00000553171 APOBP04114 4563 aaKnown RBP3.19□□□□□ -1.9
PFDN5-219ENST00000553171 IGFL4Q6B9Z1 124 aa3.19□□□□□ -1.9
PFDN5-219ENST00000553171 C5orf56Q8N8D9 126 aa3.19□□□□□ -1.9
PFDN5-219ENST00000553171 C20orf166-AS1Q96NR2 134 aa3.19□□□□□ -1.9
PFDN5-219ENST00000553171 HIGD2AQ9BW72 106 aa3.19□□□□□ -1.9
PFDN5-219ENST00000553171 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
PFDN5-219ENST00000553171 LYNX1G3V0Z9 82 aa3.18□□□□□ -1.9
PFDN5-219ENST00000553171 H3BPC8 53 aa3.18□□□□□ -1.9
PFDN5-219ENST00000553171 LYNX1P0DP58 116 aa3.18□□□□□ -1.9
PFDN5-219ENST00000553171 RPL39P62891 51 aaKnown RBP3.18□□□□□ -1.9
PFDN5-219ENST00000553171 HIGD2BQ4VC39 106 aa3.18□□□□□ -1.9
PFDN5-219ENST00000553171 PRR9Q5T870 116 aa3.18□□□□□ -1.9
PFDN5-219ENST00000553171 Q6ZR54 194 aa3.18□□□□□ -1.9
PFDN5-219ENST00000553171 SMIM29Q86T20 159 aa3.18□□□□□ -1.9
PFDN5-219ENST00000553171 MIR7-3HGQ8N6C7 128 aa3.18□□□□□ -1.9
PFDN5-219ENST00000553171 RHPN1-AS1Q9BWJ2 59 aa3.18□□□□□ -1.9
PFDN5-219ENST00000553171 IGLV5-39A0A0G2JS06 123 aa3.17□□□□□ -1.9
PFDN5-219ENST00000553171 HAMPP81172 84 aa3.17□□□□□ -1.9
PFDN5-219ENST00000553171 LINC00483Q53H64 154 aa3.17□□□□□ -1.9
PFDN5-219ENST00000553171 LINC00308Q8TCZ7 52 aa3.17□□□□□ -1.9
PFDN5-219ENST00000553171 LINC00167Q96N53 147 aa3.17□□□□□ -1.9
PFDN5-219ENST00000553171 WFDC10AQ9H1F0 79 aa3.17□□□□□ -1.9
PFDN5-219ENST00000553171 A0A1B0GVX0 72 aa3.16□□□□□ -1.9
PFDN5-219ENST00000553171 A8MTW9 85 aa3.16□□□□□ -1.9
PFDN5-219ENST00000553171 H0Y9P7 68 aa3.16□□□□□ -1.9
PFDN5-219ENST00000553171 IGHV3-53P01767 116 aa3.16□□□□□ -1.9
PFDN5-219ENST00000553171 C1orf137Q5JT78 98 aa3.16□□□□□ -1.9
PFDN5-219ENST00000553171 CIRBP-AS1Q8TBR5 109 aa3.16□□□□□ -1.9
PFDN5-219ENST00000553171 DMAC1Q96GE9 116 aa3.16□□□□□ -1.9
PFDN5-219ENST00000553171 SMIM1B2RUZ4 78 aa3.15□□□□□ -1.91
PFDN5-219ENST00000553171 G3V318 75 aa3.15□□□□□ -1.91
PFDN5-219ENST00000553171 NCR3O14931 201 aa3.15□□□□□ -1.91
PFDN5-219ENST00000553171 P0C880 135 aa3.15□□□□□ -1.91
PFDN5-219ENST00000553171 Q6ZSN1 163 aa3.15□□□□□ -1.91
PFDN5-219ENST00000553171 PRB3Q04118 309 aaPredicted RBP3.14□□□□□ -1.91
PFDN5-219ENST00000553171 KRTAP25-1Q3LHN0 102 aa3.14□□□□□ -1.91
PFDN5-219ENST00000553171 DNAH17Q9UFH2 4485 aa3.13□□□□□ -1.91
PFDN5-219ENST00000553171 ARHGAP32A7KAX9 2087 aa3.13□□□□□ -1.91
PFDN5-219ENST00000553171 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.13□□□□□ -1.91
PFDN5-219ENST00000553171 KRTAP19-4Q3LI73 84 aa3.13□□□□□ -1.91
PFDN5-219ENST00000553171 Q6YL49 198 aa3.13□□□□□ -1.91
PFDN5-219ENST00000553171 PRR34Q9NV39 138 aa3.13□□□□□ -1.91
PFDN5-219ENST00000553171 DNAH2Q9P225 4427 aa3.13□□□□□ -1.91
PFDN5-219ENST00000553171 PKD1P98161 4303 aa3.12□□□□□ -1.91
PFDN5-219ENST00000553171 VPS13DQ5THJ4 4388 aa3.12□□□□□ -1.91
PFDN5-219ENST00000553171 IGHV3-64A0A075B6Q5 118 aa3.12□□□□□ -1.91
PFDN5-219ENST00000553171 ETDCA0A1B0GVM5 59 aa3.12□□□□□ -1.91
PFDN5-219ENST00000553171 UQCR11O14957 56 aa3.12□□□□□ -1.91
PFDN5-219ENST00000553171 TLX1NBP0CAT3 122 aa3.12□□□□□ -1.91
PFDN5-219ENST00000553171 SPINK7P58062 85 aa3.12□□□□□ -1.91
PFDN5-219ENST00000553171 NTM-AS1Q6ZSK4 140 aa3.12□□□□□ -1.91
PFDN5-219ENST00000553171 C15orf56Q8N910 161 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms